mRNA_C-tenellus_contig969.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A835YZJ0_9STRA (Copper chaperone n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.490e-25 Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 4 QTVEFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELVA 222 +TV FKVGMTCEGCA+A KRILGK+ +GVS V+TDV A V V+S+G TSPQ MLDAL W AASGK VEL A Sbjct: 4 ETVVFKVGMTCEGCANACKRILGKM-SGVSAVNTDVAAKTVTVSSDGTTSPQAMLDALKVWSAASGKPVELAA 75
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A6H5L5L5_9PHAE (HMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5L5_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.030e-23 Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 4 QTVEFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELVA 222 +T F VGMTC+GCA+ATKRIL K+E GVS V+ DV A V V+S+G T+ Q MLDALLKW AASGKSVEL + Sbjct: 3 ETTVFNVGMTCDGCANATKRILSKME-GVSAVEADVSAKTVTVSSDGSTTKQAMLDALLKWSAASGKSVELAS 74
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A7S4MV96_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MV96_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.080e-19 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 13 EFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVEL 216 +F+VGMTC+GCA+A KRILGK++ GVS VDT+VEA V VT++ SP+ ML+ L KWG A+GKSV L Sbjct: 50 KFEVGMTCDGCANAVKRILGKID-GVSNVDTNVEAKTVVVTADDSISPEFMLEKLQKWGNAAGKSVAL 116
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A1Z5KFX7_FISSO (HMA domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFX7_FISSO) HSP 1 Score: 82.8 bits (203), Expect = 2.630e-19 Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 16 FKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVEL 216 F VGMTCEGCA+A KRILGK+E GVS++DTDV V V ++ +P++ML+ L KWG A+GK+VEL Sbjct: 6 FNVGMTCEGCAAAVKRILGKIE-GVSDIDTDVANKIVIVQADESVTPEMMLEKLEKWGQAAGKTVEL 71
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A2D4BLI7_PYTIN (HMA domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BLI7_PYTIN) HSP 1 Score: 79.3 bits (194), Expect = 5.870e-18 Identity = 44/71 (61.97%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 4 QTVEFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVEL 216 +T EFKVGMTCEGC+SA RIL K+ GV EV D+E V VT G Q+MLDALLKW ASGKSV L Sbjct: 3 KTTEFKVGMTCEGCSSACTRILSKIP-GVQEVKCDIEKQQVLVT--GDADDQVMLDALLKWSQASGKSVAL 70
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A024GKA2_9STRA (HMA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKA2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.820e-18 Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 10 VEFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELV 219 V+FKVGMTCEGC+SA RIL K++ GVSEV D+E ++V NG P ML+AL KW A SGKSVEL+ Sbjct: 36 VKFKVGMTCEGCSSACTRILTKIQ-GVSEVKCDMEEKIIEV--NGTADPNEMLEALKKWSAVSGKSVELL 102
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A448ZPP4_9STRA (HMA domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPP4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.520e-17 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 13 EFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELVA 222 +F +GMTC+GCA+A KRIL K++ GV+++ TDVEA VT + P +ML+ LLKW +ASGKSV L A Sbjct: 5 KFDIGMTCDGCANAVKRILMKMD-GVTDIVTDVEAKSAVVTHDESVPPSLMLEKLLKWSSASGKSVALAA 73
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A024U6W9_9STRA (HMA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6W9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.010e-17 Identity = 42/69 (60.87%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 13 EFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELV 219 EFKVGMTCEGC+ A +RIL K+ AGV+ V D+ V VT G P +ML+ALLKW ASGKSVELV Sbjct: 74 EFKVGMTCEGCSGACERILKKI-AGVTSVSCDIPGQQVLVT--GTADPAVMLEALLKWSKASGKSVELV 139
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: W4G4A3_9STRA (HMA domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4A3_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.020e-16 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 13 EFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELV 219 EFKVGMTCEGC+ A +RIL K+E GV++V D+ V VT G +ML+ALLKW ASGKSVELV Sbjct: 7 EFKVGMTCEGCSGACERILNKIE-GVTKVACDIPGQQVLVT--GTADVTVMLEALLKWSKASGKSVELV 72
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Match: A0A484DTD9_BRELC (HMA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTD9_BRELC) HSP 1 Score: 75.9 bits (185), Expect = 1.420e-16 Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 1 TQTVEFKVGMTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALLKWGAASGKSVELVA 222 T+T EF V MTC+GC+SA RIL K+E GV++V D+E V V G +ML+ALLKW ASGKSVELVA Sbjct: 2 TKTTEFMVAMTCDGCSSACTRILTKIE-GVTDVKCDIEKKRVLV--EGDADANVMLEALLKWSKASGKSVELVA 72 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig969.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig969.5.1 >prot_C-tenellus_contig969.5.1 ID=prot_C-tenellus_contig969.5.1|Name=mRNA_C-tenellus_contig969.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=67bp MTCEGCASATKRILGKLEAGVSEVDTDVEANFVKVTSNGVTSPQIMLDALback to top mRNA from alignment at C-tenellus_contig969:10898..11595+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig969.5.1 ID=mRNA_C-tenellus_contig969.5.1|Name=mRNA_C-tenellus_contig969.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=698bp|location=Sequence derived from alignment at C-tenellus_contig969:10898..11595+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig969:10898..11595+ >mRNA_C-tenellus_contig969.5.1 ID=mRNA_C-tenellus_contig969.5.1|Name=mRNA_C-tenellus_contig969.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=201bp|location=Sequence derived from alignment at C-tenellus_contig969:10898..11595+ (Choristocarpus tenellus KU2346)back to top |