mRNA_C-tenellus_contig968.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig968.2.1
Unique NamemRNA_C-tenellus_contig968.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.800e-119
Identity = 178/275 (64.73%), Postives = 216/275 (78.55%), Query Frame = 3
Query:  180 TRAEIVAEEAAREGESVTLPKKIGAGVGLDVDGAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSVKTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGITVCDRVWGPLQRGTSGIAGYTVR 1004
            T +E VAE AAR      +   IG    +D   ++L+RA+++L+ ++S+DR+ RM+ VLDQRT S T++FENP+NPNNVWACLRTLDSFGIQH HIVSDP +YSK+ARL+TM TAMGSQKW+TLHGH  PE AV KLK +G+QVVA+DLSPS V I +IDWSV TAVV+GNE RGISD MR +AD TF IPMRGF  SFN+SVACSIILAHLSA RAL+HGDLPEDERR +  TWLMQCVRG++ ILKREGI +   ++G  ++    IAGY VR
Sbjct:   89 THSENVAEAAARAAGPAKVSTFIGTRALVDQTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.380e-75
Identity = 123/242 (50.83%), Postives = 165/242 (68.18%), Query Frame = 3
Query:  279 AELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSVK-TAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGITVCDRVWGPLQRGTSGIAGYTV 1001
            AE++RAIE LE F   +R+ R+Q VL++RT     +FENPSNPNNVWA LRT+DSFGIQ+ H+++DP+ Y KK RL TM +AMGSQKW++LHGH S       LKA G++++ + L P  V +D IDWS +  AV  GNE  G+S+ +    D+TF IPMRGFAESFN+SVA SI+LA  +A   LR GDL E ERR +   WL++ V   + +L+REGI +   +   L+R   GIAG++ 
Sbjct:   16 AEMERAIEALERFTQPERLGRLQDVLNKRTAHLCTVFENPSNPNNVWAALRTIDSFGIQNVHVIADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMRGFAESFNVSVALSIVLASAAAGGGLRGGDLGEGERRAVYLRWLLRTVAAGESVLQREGIALPQSM--SLRRTEEGIAGFST 255          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC)

HSP 1 Score: 220 bits (560), Expect = 3.760e-64
Identity = 110/240 (45.83%), Postives = 157/240 (65.42%), Query Frame = 3
Query:  276 GAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLE-TMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSVKTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGITVCDRVWGPLQR--GTSGI 986
            G + + A+E L   +S DR+ER+Q V+ QRT     +FE P+NPNNVWACLRTLDSFGIQH  ++  P  Y ++  +   M  A+GS +W+++    S   A+ +LK  G +V A+DL   + ++  +D S    +V+GNE  GIS+EMRGLAD+TF +PMRGFAESFNLSVAC++  A+LS    L+ GDL E ER  +   WLM+CV G+ ++L+R+G+ V +R+    QR  G  G+
Sbjct:   85 GFDYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVPERLRRTRQRLLGCEGV 324          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.940e-62
Identity = 105/221 (47.51%), Postives = 148/221 (66.97%), Query Frame = 3
Query:  294 AIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVS--IDQIDWSV-KTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGITVCD 947
            A E L  F +  R+ER++ ++++RT S   +FEN +NPNN+WACLR+LD+FG+Q+ H++ D   Y K  RL    +AMGSQKW+T+  H S  A V  LK EG+ V+A+DL P T    + ++ W+  K A+VMGNE RGI++EMR L D TFQIPM GFAESFNLS + ++ LA +S+   L+HGDLP  E+  +   WL++ V     IL+REG+ + D
Sbjct:   17 ATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIED 237          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.910e-61
Identity = 108/239 (45.19%), Postives = 157/239 (65.69%), Query Frame = 3
Query:  294 AIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVS--IDQIDWSV-KTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGITVCDRVWGPLQRGTSGIAGYTV 1001
            A E L  F +  R+ER++ ++++RT S   +FEN +NPNN+WACLR+LD+FG+Q+ H++ D   Y K  RL    +AMGSQKW+T+  H S  A V  LK EG+ V+A+DL P T    + +++W+  K A+VMGNE RGI++EMR L D TFQIPM GFAESFNLS + ++ LA +S+   L+HGDLP  E+  +   WL++ V     IL+REG+ + D  + P  +    + GY++
Sbjct:  158 ATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERFLPTSKA---VLGYSL 393          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV)

HSP 1 Score: 207 bits (526), Expect = 3.320e-58
Identity = 116/236 (49.15%), Postives = 152/236 (64.41%), Query Frame = 3
Query:  270 VDGAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLET---MVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSV-KTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATR-----ALRHGDLPEDERRRINATWLMQCV---RGADKILKREGITV 941
            +D   + RA +IL  F+  DR ER+  VL QRT  T  +FENPSNP+NVWACLRT+DSFG+Q+  +V D   Y  K  ++    M TAMGS KW++L  H S E AV  +KAEG+++ A+DL+P++  + ++DW V    VVMGNE RGISDEMR +AD TF +PM GFAESFNLSVA SI LAH+SA       ALR GDL   E   +    L+  +   +    +LK+EGI +
Sbjct:  167 LDPDVVSRATDILRPFVGDDRYERIDSVLRQRTKRTKFLFENPSNPSNVWACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHELACLRLKGLLGSLPKRKLGPILLKQEGIVL 402          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A7S2XPD6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPD6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.830e-55
Identity = 102/202 (50.50%), Postives = 143/202 (70.79%), Query Frame = 3
Query:  270 VDGAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARL---ETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDW--SVKTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDE 860
            +D   ++RA E+L   I++DR+ER++ VL QRT  +  +FENP+NP+NVWACLRT+DSFGIQ+  +V   D+Y  KA +   + M TAMGS +W+TL  H    +AV  +K +GF++ A+DL+P++  + ++DW  +    VVMGNEN GISDEMR LAD+TF +PM GFAESFNLSVA +I LAH+SA    + G  P+D+
Sbjct:  134 LDPELVERASEVLIRHINEDRIERVESVLKQRTKQSRFLFENPTNPSNVWACLRTIDSFGIQNVDVVMQGDNYRGKAAIVQKKGMRTAMGSAQWLTLINHPDTASAVASIKQQGFKIYASDLNPNSKDVRELDWVNAGPICVVMGNENNGISDEMRELADETFTLPMSGFAESFNLSVATAITLAHMSA----KSGTSPDDK 331          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A8J2SJW7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJW7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.890e-55
Identity = 113/243 (46.50%), Postives = 149/243 (61.32%), Query Frame = 3
Query:  258 VGLDVDGAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDP-DSYSKKA---------------RLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDW-SVKTAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILKREGI 935
            V L  D A + RA+ IL  ++S +R +  QRV+ QRT   +V FE PSNP+NVWACLRT+D+FG Q  HIV D  +  +K+A               R + M +AMG+QKW++L  HA  +A V KLK+EG  V ATDLSP  V   ++DW S K A+V GNE  GISDE+R LAD   ++PMRG AES NLSV+    LAH+ A  AL   DL  +ER  +   W +  VR   ++L+REG+
Sbjct:   62 VTLTGDAAVVRRAVSILAPYVSDERRDTFQRVVQQRTRHLSVAFERPSNPSNVWACLRTIDAFGCQDVHIVEDSLEEAAKRAAARGVHADPTQRMRGRKKRMTSAMGAQKWLSLEAHADAQALVSKLKSEGRIVAATDLSPGAVDFSEVDWASGKHALVFGNEEVGISDELRELADVRVRLPMRGLAESLNLSVSVGAALAHVDAKGALV-PDLTVEERDLLLLRWSLLSVRAGRELLRREGV 303          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A7S1Y6X6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X6_9STRA)

HSP 1 Score: 197 bits (501), Expect = 7.200e-55
Identity = 111/234 (47.44%), Postives = 148/234 (63.25%), Query Frame = 3
Query:  291 RAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKK---ARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSVK----TAVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATRA-------LRHGDLPEDERRRINATWLMQCV---RGADKILKREGITV 941
            RA E L  FI +DR ERM+ VL QRT +   +FENPSNP+NVWACLRT+DSFG+Q   +V     Y  K   A+   + TAMGS +W++L  H +  +AV KLK+EG+++ A+DL+P++  +  +DWS        +VMGNE RGIS EMR LAD+TF +PM GFAESFNLSVA +I LAHLSA          LR GD+ E E  R+    ++  +   R A  +LKR  + +
Sbjct:  140 RATETLRPFIREDRAERMESVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQDVDLVVQSGQYEGKGAIAQKSGLRTAMGSAQWLSLTNHPTTASAVAKLKSEGYKLYASDLNPNSKDVRDVDWSADGDRPICIVMGNEGRGISQEMRELADETFTLPMCGFAESFNLSVATAITLAHLSAKSGHENQEGPLRPGDMDEHEYNRLLLKGIIFSLPQRRTARALLKRNNVVL 373          
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA)

HSP 1 Score: 195 bits (496), Expect = 4.180e-54
Identity = 109/250 (43.60%), Postives = 157/250 (62.80%), Query Frame = 3
Query:  264 LDVDGAELDRAIEILETFISKDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVSDPDSYSKKARLET---MVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATDLSPSTVSIDQIDWSVKT---AVVMGNENRGISDEMRGLADKTFQIPMRGFAESFNLSVACSIILAHLSATR-------------ALRHGDLPEDERRRINATWLMQCV---RGADKILKREGITVCD 947
            L +D   + +AIE LE +I+ DR+ER+  VL QRT  +  +FENPSNP+NVWACLRT+DSFG+Q+  ++ D   Y+ K  +     M TAMGS +W+TL  H + + A+++++ +GF++ A+DL+P++  +  IDW        +VMGNE+RGIS EMR +AD+TF +PM GFAESFNLSVA SI LAH+SA                LR GDL E E   +    L+  +   R +  +LK+ G+ + D
Sbjct:  129 LALDPELIAKAIETLEPWINGDRLERVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGMQNVDVIIDSGRYAGKQAISQKKGMRTAMGSAQWLTLTNHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAGVELPD 378          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig968.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y6_ECTSI2.800e-11964.73SpoU_methylase domain-containing protein n=2 Tax=E... [more]
A0A836C8H0_9STRA4.380e-7550.83Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A0G4EX06_VITBC3.760e-6445.83SpoU_methylase domain-containing protein n=2 Tax=V... [more]
A0A4D9CY40_9STRA6.940e-6247.51SpoU_methylase domain-containing protein n=2 Tax=M... [more]
W7UA00_9STRA1.910e-6145.19Trna rrna methyltransferase n=1 Tax=Nannochloropsi... [more]
A0A7S2A9L6_TRICV3.320e-5849.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2XPD6_9STRA2.830e-5550.50Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A8J2SJW7_9STRA2.890e-5546.50Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1Y6X6_9STRA7.200e-5547.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0Y847_9STRA4.180e-5443.60Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig968contigC-tenellus_contig968:2738..5879 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6Y6
PFAMsSpoU_methylase
Model size1336
Max annot lvl2759|Eukaryota
KEGG koko:K00556
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.33e-123
EggNOG OGsCOG0566@1|root,KOG0838@2759|Eukaryota
EC2.1.1.34
DescriptionrRNA methyltransferase
Cds size834
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig968.2.1prot_C-tenellus_contig968.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig968 2911..5425 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790195.4463475-UTR-C-tenellus_contig968:2737..27851680790195.4463475-UTR-C-tenellus_contig968:2737..2785Choristocarpus tenellus KU2346UTRC-tenellus_contig968 2738..2785 +
1680790195.5204854-UTR-C-tenellus_contig968:5425..58791680790195.5204854-UTR-C-tenellus_contig968:5425..5879Choristocarpus tenellus KU2346UTRC-tenellus_contig968 5426..5879 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790195.4581318-CDS-C-tenellus_contig968:2910..31501680790195.4581318-CDS-C-tenellus_contig968:2910..3150Choristocarpus tenellus KU2346CDSC-tenellus_contig968 2911..3150 +
1680790195.4719088-CDS-C-tenellus_contig968:3378..34971680790195.4719088-CDS-C-tenellus_contig968:3378..3497Choristocarpus tenellus KU2346CDSC-tenellus_contig968 3379..3497 +
1680790195.4862025-CDS-C-tenellus_contig968:3702..37781680790195.4862025-CDS-C-tenellus_contig968:3702..3778Choristocarpus tenellus KU2346CDSC-tenellus_contig968 3703..3778 +
1680790195.4958756-CDS-C-tenellus_contig968:4283..45011680790195.4958756-CDS-C-tenellus_contig968:4283..4501Choristocarpus tenellus KU2346CDSC-tenellus_contig968 4284..4501 +
1680790195.5087202-CDS-C-tenellus_contig968:5244..54251680790195.5087202-CDS-C-tenellus_contig968:5244..5425Choristocarpus tenellus KU2346CDSC-tenellus_contig968 5245..5425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig968.2.1

>prot_C-tenellus_contig968.2.1 ID=prot_C-tenellus_contig968.2.1|Name=mRNA_C-tenellus_contig968.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=278bp
MNTRAEIVAEEAAREGESVTLPKKIGAGVGLDVDGAELDRAIEILETFIS
KDRVERMQRVLDQRTISTTVMFENPSNPNNVWACLRTLDSFGIQHGHIVS
DPDSYSKKARLETMVTAMGSQKWMTLHGHASPEAAVEKLKAEGFQVVATD
LSPSTVSIDQIDWSVKTAVVMGNENRGISDEMRGLADKTFQIPMRGFAES
FNLSVACSIILAHLSATRALRHGDLPEDERRRINATWLMQCVRGADKILK
REGITVCDRVWGPLQRGTSGIAGYTVR*
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mRNA from alignment at C-tenellus_contig968:2738..5879+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig968.2.1 ID=mRNA_C-tenellus_contig968.2.1|Name=mRNA_C-tenellus_contig968.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3142bp|location=Sequence derived from alignment at C-tenellus_contig968:2738..5879+ (Choristocarpus tenellus KU2346)
GATACGGAGTGGGACGAAGGGAGGCAGTGGGAGTATGGGACCTGGAAGGT GACGAAAATGGACCTTGAAATGCACCTTCTTGCACAACCGTAAGATCATG TCGCTCTACTCTACAAGCAGAGGGTGGGAAACTTCAATGTATCTCGTTGA TCACAACGGCACCCCGCGCACAGATGAATACGCGCGCTGAGATTGTGGCC GAGGAAGCTGCTCGAGAAGGCGAATCTGTTACCCTACCGAAAAAAATTGG AGCAGGAGTAGGACTGGATGTGGATGGGGCGGAACTCGATCGGGCGATCG AAATCCTGGAAACCTTCATCTCGAAGGATCGGGTCGAACGGATGCAACGG GTTCTGGATCAGCGCACTATAAGCACGACAGTCATGTTCGAGAACCCGAG CAACCCCAACAATGTAAAGTAGCTTGTTACGGAGTAATTATTGGTGAATA TTGGAACACAATTTACGTTTATCTAGGGAACTTACTTGACTGTTGTAACA TATAGTATGGGGCGTTTTGGGTCCCATCATTGTGTCATTAATGAATGGGC AATATCAGATTTTCCCCTATTTTCAAGTTCCTATCCTGACACGAATATAA TTGCTATTTCAGCAATTTTGACGCATGGATAACTTGAACAGGTATGGGCA TGCCTACGCACGCTTGATTCCTTCGGCATCCAACACGGTCACATCGTGTC GGACCCGGATTCGTACAGCAAGAAGGCAAGACTCGAGACAATGGTCACAG CGATGGGCAGGTGAGAATAGTTAATTTGAGGTGTGTAAAAAAGATTGGTG GTGGTTCCAGACCTTTACGGTATCAGCATGAAGCCCAGTGAGATGATGTT GTCACTCCATCTATTTTTAGCCTCAACCACTATGCTTCCGGTGCATTTGT GTACTTTTCTCAACAACCCCCTCCTACCCTTGCTGGATCTTCATGGTGTA AATAAATTTCACCAGTCAGAAATGGATGACATTGCATGGTCATGCATCCC CGGAGGCTGCAGTGGAAAAATTGAAAGCAGAGGGGTTTCAGGTATGTTTA TTGGGCTAGAGGGTATTTAATTAACACCGTGTTATGGTTATTACCTGTCT ACCACCTCCCCTCGACCGAGTACAACATCTCTAGTTGGATATCTTGAACC GGTTACATTTTACCTTTTAATCTTTTAGTGGATGTTGCTACAAGTACCCA GTTTTGCTCCTTCAGGTGCTTCCCATCTTGTTGTGGTATGCAGTCCCTCT TGATGTCACATGATCTATCTCCTGTGACCTGGCTGTATTTTCGAACAAAC AATGATGACCTAGTTAGGTCTGCACACTTCTGATTGTGAGCCAAGGAGGT GCAATATCAACATTATTTCAAGTGTTTTGTCATGGTTGACTCAACGCCTT CATACATGCTCTCCCACACCTTCTTGAGCACTTGAACCAATACATGATTC AGCCCTTCATAAGTTACTTTCCACTTGTTCTACACGAGAAGGTTTAAAAT AAACTTCAGTACAAATTTTTTGGCCTGATTGTCTCCTTTCCTGCAGGTGG TTGCAACAGACCTCTCGCCATCTACAGTGTCGATAGACCAAATCGATTGG TCAGTCAAGACAGCTGTGGTGATGGGCAATGAAAATCGCGGTATCTCTGA TGAAATGAGGGGGCTGGCGGACAAGACCTTCCAGATACCTATGCGGGGCT TTGCAGAATCGTTCAACTTGTCGGTGGCGTGCTCAATCATACTTGCCCAT TTAAGTGCCACGAGGTTAGTACCAGCAAGAGCTATGATCAAATGCTCCCT CCTTCTATTGAGGATCAACCCATCACCACTGCAGTAGCAGTGTGCCCGTC TTACACTGCCTAGGGTTGTTGCTCAATTTGCTCTTTCCTGACGTGTTGGA CATGGTTGCGGTCATGCCTTGTGTGCGCTGTGTGTAGTGAGGACATTATA AGAAGACAAGCTCCACATGGAAACCACTGCAGTGTTTATTGTGCACCTAT TCTAGATGCTAGCACACCAATCCTAAGAGTGATGAAAGATGCTCAACTCT TTTTCTGAACTTATTTGCTCCATCTCGCAGTGTTGTGAAAAGTGTCCCTT ATGATTATAGGAATTCCACCGTCTGCTGCCTGTCTGTAGTCAAAACCACA CATGTTGAATTTGGAAGGATCAAAGCATGATCCTGTACTACATGGTGGAC CAATCCAAGCATAGGCCCCCATTACAGATGGCGGTGGACAACCAAGAGCG ATCACTTTCTCTTGTATCCTGAATACATCTGGAGCACCTGCTTGTGAAGT CCAAACTATATACAGGATGGGTATTGACAGGAAACTGACCACAATAACAT GTTTTTGTCCTACTGCAGAATTTATTTTTTTCTCTCCCATTTCTGTTATT TCCATCAGTAAATATTGACAAGATTTACATCTGCTTGGCACTAATTCCCC ATCAACTGTCCATCCCCAAATAAACTACCCATTGATTCATGGTTCTGGAC CTCTCAGGGCATTGAGGCATGGGGATCTTCCTGAGGATGAGCGACGTAGG ATTAATGCCACCTGGCTCATGCAATGTGTCCGTGGAGCAGACAAAATTCT TAAGAGGGAGGGTATAACGGTGTGTGATAGGGTGTGGGGGCCTCTCCAGC GTGGCACCAGTGGCATTGCTGGCTACACTGTGAGATAACCAACCCTGTGC TGAATGAGTCTGACTTGGGCATGTTCAAGGGGCAGGAGAAGTCAAAATCA GATAGTTGAGATGAAGAAAGCCAACACTAATGCCCTCGTGTGTGCACTTA AGGATTCCACAGGAGTCTCGTGCAGTTGTAGATACAATTTGCAAGTGTTA CACTTGGCAGAGTGGGGCATTTAGAAAAGTGGACTGTCAGTGGAGGGTTA CTTGTAAGGGAAACTCTGTTAGAACTGATTGTTTTGTTTCATCTTGGTTA CAATACTGGGTCGTCTTACATCTCTCATCCTGCGGTGCACTGAATGCAGT GACCTCAATGTTGACAAGAAGCCGATAATTAGGGCTACTTACACATTGGT ACTTAACACACTATGTGCTCAGAAATGGATATCCAACTGGTCCTTTAAAC TATGCTTAAGACCCTAGGTGAGGATGTCTCTTAAATGCCGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig968:2738..5879+

>mRNA_C-tenellus_contig968.2.1 ID=mRNA_C-tenellus_contig968.2.1|Name=mRNA_C-tenellus_contig968.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=834bp|location=Sequence derived from alignment at C-tenellus_contig968:2738..5879+ (Choristocarpus tenellus KU2346)
ATGAATACGCGCGCTGAGATTGTGGCCGAGGAAGCTGCTCGAGAAGGCGA
ATCTGTTACCCTACCGAAAAAAATTGGAGCAGGAGTAGGACTGGATGTGG
ATGGGGCGGAACTCGATCGGGCGATCGAAATCCTGGAAACCTTCATCTCG
AAGGATCGGGTCGAACGGATGCAACGGGTTCTGGATCAGCGCACTATAAG
CACGACAGTCATGTTCGAGAACCCGAGCAACCCCAACAATGTATGGGCAT
GCCTACGCACGCTTGATTCCTTCGGCATCCAACACGGTCACATCGTGTCG
GACCCGGATTCGTACAGCAAGAAGGCAAGACTCGAGACAATGGTCACAGC
GATGGGCAGTCAGAAATGGATGACATTGCATGGTCATGCATCCCCGGAGG
CTGCAGTGGAAAAATTGAAAGCAGAGGGGTTTCAGGTGGTTGCAACAGAC
CTCTCGCCATCTACAGTGTCGATAGACCAAATCGATTGGTCAGTCAAGAC
AGCTGTGGTGATGGGCAATGAAAATCGCGGTATCTCTGATGAAATGAGGG
GGCTGGCGGACAAGACCTTCCAGATACCTATGCGGGGCTTTGCAGAATCG
TTCAACTTGTCGGTGGCGTGCTCAATCATACTTGCCCATTTAAGTGCCAC
GAGGGCATTGAGGCATGGGGATCTTCCTGAGGATGAGCGACGTAGGATTA
ATGCCACCTGGCTCATGCAATGTGTCCGTGGAGCAGACAAAATTCTTAAG
AGGGAGGGTATAACGGTGTGTGATAGGGTGTGGGGGCCTCTCCAGCGTGG
CACCAGTGGCATTGCTGGCTACACTGTGAGATAA
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