mRNA_C-tenellus_contig9651.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9651.1.1
Unique NamemRNA_C-tenellus_contig9651.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: D8LRW9_ECTSI (Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRW9_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.720e-45
Identity = 74/94 (78.72%), Postives = 80/94 (85.11%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAEG 291
            GNTGAT+ GPCMFDPASFFGHSEFELAIMEMFGGF   FW AYH K+PKA GF  RQKLYKLYHYLNQLNLFGDPKVR+TVE L +E+L   +G
Sbjct:  259 GNTGATIEGPCMFDPASFFGHSEFELAIMEMFGGFQEPFWTAYHDKIPKAEGFERRQKLYKLYHYLNQLNLFGDPKVRETVETLTNEMLSDLDG 352          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A6H5JFY5_9PHAE (Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.020e-44
Identity = 75/94 (79.79%), Postives = 80/94 (85.11%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAEG 291
            GNTGAT+ GPCMFDPASFFGHSEFELAIMEMFGGF   FW AYH K+PKA GF  RQKLYKLYHYLNQLNLFGDPKVR+TVE L +EIL   +G
Sbjct:  375 GNTGATIEGPCMFDPASFFGHSEFELAIMEMFGGFQEPFWTAYHDKIPKAEGFERRQKLYKLYHYLNQLNLFGDPKVRETVETLTNEILSDLDG 468          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A835Z3B4_9STRA (Protein-ribulosamine 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.040e-35
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 1
Query:    1 MEPGNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAE 288
            M  GN G T  GPC FDPASFFGHSEF+L+IM++F G+T  FW AYHAK+P+A GF +RQ++Y+LYHYLNQLNLFGD  V  TV+ L  +IL A +
Sbjct:  254 MWIGNAGGTPEGPCCFDPASFFGHSEFDLSIMDLFAGYTDAFWAAYHAKIPRAEGFRERQRVYQLYHYLNQLNLFGDSNVALTVQRLTADILEAQQ 349          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: W7TUZ5_9STRA (Protein-ribulosamine 3-kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUZ5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.770e-31
Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEIL 276
            GN GAT  GP +FDPA FFGH E ELA+M +FGGF  EFW AYHA++PK  GF  RQKLY+ Y+YLNQLNLFGD  V++T   L +E+L
Sbjct:  335 GNAGATEAGPVIFDPACFFGHHEMELAMMTLFGGFRDEFWNAYHARLPKEKGFETRQKLYQFYYYLNQLNLFGDAGVKRTCVRLAEELL 423          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A7S0VP00_9CRYP (Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VP00_9CRYP)

HSP 1 Score: 112 bits (280), Expect = 1.020e-29
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1
Query:   10 GNTGATLGGP-CMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVR 243
            GN GAT     C+FDPA FFGHSEF+LAI  MFGG+T  F+E+YHA +P+A GF  R+ LY+LYHY+NQLNLFGDP VR
Sbjct:   53 GNAGATGDSEACVFDPACFFGHSEFDLAITGMFGGYTDAFYESYHAAIPRAEGFQQREGLYRLYHYVNQLNLFGDPAVR 131          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A7S2ZNV6_9RHOD (Protein-ribulosamine 3-kinase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNV6_9RHOD)

HSP 1 Score: 114 bits (284), Expect = 5.550e-28
Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEIL 276
            GN G T     ++DPA FFGHSE +LAIME+FGGFT +F+ AYH+++PKA GF +R K+YK+YHYLNQLNLFG+ +V+  V  L+ E++
Sbjct:  307 GNAGFTKDKAVVYDPACFFGHSEMDLAIMELFGGFTDKFYNAYHSRIPKAEGFEERSKIYKVYHYLNQLNLFGNEQVKVEVIKLLRELV 395          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: L1IRH3_GUITC (Protein-ribulosamine 3-kinase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IRH3_GUITC)

HSP 1 Score: 111 bits (278), Expect = 1.890e-27
Identity = 52/89 (58.43%), Postives = 67/89 (75.28%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEIL 276
            GN GAT  GP +FDPA FFGHSEF+LAIM++FGGF+ EF++AY+  +P+  GF  R++ Y LY+YLNQLNLFGD KV      ++ EIL
Sbjct:  252 GNAGATTDGPVLFDPACFFGHSEFDLAIMKIFGGFSDEFFQAYYEILPQEEGFEQRERYYLLYNYLNQLNLFGDEKVLVKCISVMQEIL 340          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A0G4EPS1_VITBC (Protein-ribulosamine 3-kinase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPS1_VITBC)

HSP 1 Score: 112 bits (281), Expect = 2.120e-27
Identity = 56/97 (57.73%), Postives = 68/97 (70.10%), Query Frame = 1
Query:   10 GNTGAT-LGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAEGVS 297
            GNTGAT  G P  FDPASFFGH EF+LA+  MFGGF  EF++ YH  +P+A  F  RQ +Y+LY YLNQLNLFGDP+V+   E L+D IL   +  S
Sbjct:  310 GNTGATGEGQPTAFDPASFFGHHEFDLALAYMFGGFRDEFYQEYHRAIPRAPLFESRQLIYQLYQYLNQLNLFGDPRVKGKCEELMDHILSIKDPAS 406          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A7S0N4H8_9CRYP (Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N4H8_9CRYP)

HSP 1 Score: 105 bits (262), Expect = 2.400e-27
Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 1
Query:   10 GNTGATLG---GPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAE 288
            GNTGAT     GP +FDP+  FGHSE +LA+ ++FGGF+  F +AYHA +PKA+GF +R ++Y LYHYLNQLNLFGDP V      L+  IL  A+
Sbjct:   12 GNTGATPPPEEGPVVFDPSCVFGHSELDLALGDLFGGFSPAFHDAYHAVLPKAAGFEERGRVYALYHYLNQLNLFGDPHVAAKCAELMRTILGDAQ 107          
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Match: A0A8C5QD09_9ANUR (Protein-ribulosamine 3-kinase n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QD09_9ANUR)

HSP 1 Score: 107 bits (268), Expect = 3.140e-26
Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 1
Query:   10 GNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKVPKASGFSDRQKLYKLYHYLNQLNLFG 228
            GN   T  GP +FDPASF+GHSEFELAI  MFGGF+G F+ AYHAK+PK+ GF  RQKLY+L+HYLN  N FG
Sbjct:  221 GNVAETDAGPVIFDPASFYGHSEFELAIAGMFGGFSGSFYSAYHAKIPKSPGFERRQKLYQLFHYLNHWNHFG 293          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRW9_ECTSI2.720e-4578.72Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A6H5JFY5_9PHAE1.020e-4479.79Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A835Z3B4_9STRA2.040e-3562.50Protein-ribulosamine 3-kinase n=1 Tax=Tribonema mi... [more]
W7TUZ5_9STRA3.770e-3162.92Protein-ribulosamine 3-kinase n=3 Tax=Monodopsidac... [more]
A0A7S0VP00_9CRYP1.020e-2965.82Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=H... [more]
A0A7S2ZNV6_9RHOD5.550e-2857.30Protein-ribulosamine 3-kinase n=4 Tax=Rhodosorus m... [more]
L1IRH3_GUITC1.890e-2758.43Protein-ribulosamine 3-kinase n=1 Tax=Guillardia t... [more]
A0A0G4EPS1_VITBC2.120e-2757.73Protein-ribulosamine 3-kinase n=2 Tax=Vitrella bra... [more]
A0A7S0N4H8_9CRYP2.400e-2755.21Protein-ribulosamine 3-kinase (Fragment) n=1 Tax=C... [more]
A0A8C5QD09_9ANUR3.140e-2667.12Protein-ribulosamine 3-kinase n=1 Tax=Leptobrachiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9651contigC-tenellus_contig9651:409..1657 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRW9
PFAMsFructosamin_kin
Model size306
Max annot lvl2759|Eukaryota
KEGG koko:K15523
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.46e-46
EggNOG OGsCOG3001@1|root,KOG3021@2759|Eukaryota
EC2.7.1.172
Descriptionprotein-ribulosamine 3-kinase activity
Cds size306
COG categoryG
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790193.9361799-CDS-C-tenellus_contig9651:408..5551680790193.9361799-CDS-C-tenellus_contig9651:408..555Choristocarpus tenellus KU2346CDSC-tenellus_contig9651 409..555 +
1680790193.9541996-CDS-C-tenellus_contig9651:1498..16571680790193.9541996-CDS-C-tenellus_contig9651:1498..1657Choristocarpus tenellus KU2346CDSC-tenellus_contig9651 1499..1657 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9651.1.1prot_C-tenellus_contig9651.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9651 409..1657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9651.1.1

>prot_C-tenellus_contig9651.1.1 ID=prot_C-tenellus_contig9651.1.1|Name=mRNA_C-tenellus_contig9651.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=102bp
MEPGNTGATLGGPCMFDPASFFGHSEFELAIMEMFGGFTGEFWEAYHAKV
PKASGFSDRQKLYKLYHYLNQLNLFGDPKVRQTVEGLVDEILPAAEGVSV
T*
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mRNA from alignment at C-tenellus_contig9651:409..1657+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9651.1.1 ID=mRNA_C-tenellus_contig9651.1.1|Name=mRNA_C-tenellus_contig9651.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1249bp|location=Sequence derived from alignment at C-tenellus_contig9651:409..1657+ (Choristocarpus tenellus KU2346)
ATGGAGCCAGGGAACACTGGGGCTACTCTGGGAGGTCCATGCATGTTTGA CCCGGCAAGCTTTTTTGGGCACTCTGAGTTTGAGCTGGCTATCATGGAGA TGTTTGGGGGTTTCACCGGAGAGTTCTGGGAGGCGTATCATGCCAAGGTA ATGTTTGTGTGTAAAAGTACTGGTATCAAGAGGCACTTCTCTGGTACCCG GGGTGGGGGGGAGGGGGTATGTCTTCTAGATTGATGCAATCATCGTGCAC CTCTTTTGAGTTGCGCATCTTGTGCAGCATGCCTCTTTTTTCATATTTTA TTATTAATAGTAGTAACAATTTTATGGAATAAAAATAATTGGCGGAGGGG GGGGGGGGGGGGGGGGGGGGGGAGATATTTATATAAAAAAAAGAAGAAAA AGATTTGGGTGGGGGAAGAGAAAAAAAAATTANNNNNNNNCCTTCTTATT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAATTAAGGGGAGAAA AAAGGTGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGCGGAG TCAATTGTTGCAAAATAAGGCTACAACACTATGGCTTGTGGTGAAGAAGA AAATCGATATCTGCATAACTCCCACCTGTTTATGTGTACAAAGTAGTACC AATCTATACCGTGGGATCTGAATGGGTGAAGAGAGCCGTTTCATCCCTCT TCTTGGCACAAGAGTCCTCTAACCCTAACCCTAACCCTAACCCTAACCCT AACCCTAGAGGTGTTTTGCGCACCGTAACCAACTTGAACCAAGAAAACTG TCAACACCCCCTCGCTCTCCCGATTTTTTACTGCGGTGAAGTAGCAAATG TTTTAAAGACGCCTCCTCTCCTTTTTCAGTTGTGCTCTGCGCCCCACCAA GAATATAAACACACGAGCGCACCTGTTTGTAGTTGGTGGATTAGGGCGCC TCCTGCTAAGGCATCTTGGCTTCACCACAAAGCCACAATGAAGCTCCAAC CCTCCTGCGTTATTTCGACGTCCACGTGTCTCAATGTAAAGCCCTCCCCC TGACCCCATTCAAATGAATTTTTTTCATTGACTTGTACAGGTGCCTAAGG CAAGTGGCTTTTCGGACAGGCAGAAGCTGTACAAGTTGTACCACTACCTC AACCAACTCAACTTGTTCGGAGATCCCAAAGTACGCCAGACTGTGGAGGG GCTGGTGGATGAGATCCTTCCCGCGGCAGAAGGCGTCTCAGTAACATAA
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Coding sequence (CDS) from alignment at C-tenellus_contig9651:409..1657+

>mRNA_C-tenellus_contig9651.1.1 ID=mRNA_C-tenellus_contig9651.1.1|Name=mRNA_C-tenellus_contig9651.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=306bp|location=Sequence derived from alignment at C-tenellus_contig9651:409..1657+ (Choristocarpus tenellus KU2346)
ATGGAGCCAGGGAACACTGGGGCTACTCTGGGAGGTCCATGCATGTTTGA
CCCGGCAAGCTTTTTTGGGCACTCTGAGTTTGAGCTGGCTATCATGGAGA
TGTTTGGGGGTTTCACCGGAGAGTTCTGGGAGGCGTATCATGCCAAGGTG
CCTAAGGCAAGTGGCTTTTCGGACAGGCAGAAGCTGTACAAGTTGTACCA
CTACCTCAACCAACTCAACTTGTTCGGAGATCCCAAAGTACGCCAGACTG
TGGAGGGGCTGGTGGATGAGATCCTTCCCGCGGCAGAAGGCGTCTCAGTA
ACATAA
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