mRNA_C-tenellus_contig95.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: D7FVR9_ECTSI (Heme-binding family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR9_ECTSI) HSP 1 Score: 125 bits (314), Expect = 3.160e-28 Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 796 RKMWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVIK 1131 R M FVMP D+ AE AP PR+ V VR + +GE+LAVR FPGFAT GEV QL TLL AL EA S+ +S W A+DP G SYR+MQYNPPYTLPW + N +AVQV + Sbjct: 132 RTMSFVMPKDVPAEEAPTPRNPRVNVRDVAEGEVLAVREFPGFATDGEVGGQLDTLLWALQLEA------STSASPWCARDPVGRSYRLMQYNPPYTLPWQRTNAIAVQVYR 237
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S0JKM7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKM7_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 1.080e-16 Identity = 52/121 (42.98%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 802 MWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVIKSTKPVEQLAKL 1164 M FV+PS +A AP P D +V ++Q+ +G+ LAV F GFATGGEV RQ LL L R+ + D G+SY + QYNPPYT+PWL+RNE+A+ V + E+ L Sbjct: 261 MSFVLPSKYSAATAPAPSDPAVRLQQV-EGQTLAVAEFTGFATGGEVERQREQLLAKLRRDGVDIPD-------------GGSSYTVFQYNPPYTIPWLRRNELAMSVSLAPPTTEETEPL 367
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S0BHW1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHW1_9RHOD) HSP 1 Score: 87.0 bits (214), Expect = 2.940e-16 Identity = 50/129 (38.76%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 742 TPMHQCHNDPTACFFVDLRKMWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVI 1128 TP+ ND D M FV+PS + +AP P +V V++ +L A + FPGFAT GE RQL TL + RE ++S + Y+++QYNPPYTLPWL+RNE+ + VI Sbjct: 19 TPVVMDRND-------DKSTMSFVLPSKYSLASAPSPNSPNVTVKETTT-QLFACKEFPGFATEGETKRQLATLKSYIGREPNITMEDSER-------------YQLLQYNPPYTLPWLRRNEIMIPVI 126
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A0G4G1P9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G1P9_VITBC) HSP 1 Score: 92.4 bits (228), Expect = 5.660e-16 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 802 MWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQV 1125 M F++PSD T + AP PRD + + + G++LAVR F GFAT GE++RQL L A+ E W+ D S ++++ QYNPP TLPWL++NEVAV+V Sbjct: 282 MSFILPSDYTLDTAPLPRDIDIDIEKA-GGDVLAVRDFSGFATEGEISRQLDKLRDAIALEGK-----------WEVVDESSDAFKVFQYNPPQTLPWLRKNEVAVRV 377
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S3AJD4_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJD4_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 3.430e-15 Identity = 53/135 (39.26%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 766 DPTACFFVDLR----KMWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVIKSTKPVEQLA 1158 D TA VD+ +M +P+ +A +P +D V +RQ E +AVR F GFATGGE+ RQL +LL L R+A D G +Y ++QYNPPYTLPWL+RNE+AV + + + +A Sbjct: 68 DMTAPLRVDVSPTGAEMALPLPAKYSAATSPAAQDGKVTLRQTM-AETIAVREFTGFATGGEIKRQLSSLLDQLQRDAVSIRD--------------GDTYAVLQYNPPYTLPWLRRNEIAVPIAVAVAASDDVA 187
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: K8Z7F5_NANGC (Soul heme-binding protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z7F5_NANGC) HSP 1 Score: 88.2 bits (217), Expect = 1.170e-14 Identity = 52/108 (48.15%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 802 MWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQV 1125 M F+M S T E AP+P D V + E LA R F GFAT GEV RQL +LL L R+ D ASYRI QYNPPYTLPWL+RNE+ V+V Sbjct: 263 MRFIMASPYTTETAPRPMDSKVRLTTTAR-ERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDP--------------ASYRIFQYNPPYTLPWLRRNEILVEV 355
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S2E3N2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2E3N2_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.910e-14 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 784 FVDLRKMWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGA-SYRIMQYNPPYTLPWLKRNEVAVQVIKSTKPVEQLAKLRDVNSTSLND 1194 F ++ +M ++P +A AP P D ++++RQ + + +AV F G AT GEV RQL L ++ R+ QSS A + G+ +Y ++QYNPPYTLPWL+RNE+AV PVE L L +V D Sbjct: 113 FGEMVEMSMMLPRRFSASTAPAPSDPNLLLRQS-EVQTMAVAQFAGLATAGEVRRQLEALKVSIGRDGL-------QSSEGMADEFGGSCTYSLLQYNPPYTLPWLRRNEIAV-------PVEPLTDLSEVEGGKAGD 235
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S3E9Q7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9Q7_9RHOD) HSP 1 Score: 86.3 bits (212), Expect = 3.480e-14 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 790 DLRKMWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVIKSTK 1140 D+ M FV+PS + ++AP P V V++ +L A + FPGFAT GE RQL TL + +E ++S + Y+++QYNPPYTLPWL+RNEV + VI + + Sbjct: 239 DISTMSFVLPSKYSMDSAPPPNSPKVTVKETAT-QLFACKEFPGFATEGETKRQLATLKSYIGKEPGISMEDSDR-------------YQLLQYNPPYTLPWLRRNEVMIPVIMNAE 341
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A4D9DAF2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAF2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.820e-14 Identity = 52/108 (48.15%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 802 MWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQV 1125 M F+M S T E AP+P D V + E LA R F GFAT GEV RQL +LL L R+ D ASYRI QYNPPYTLPWL+RNE+ V+V Sbjct: 794 MRFIMASPYTTETAPRPMDSKVRLTTTAR-ERLAAREFAGFATEGEVQRQLISLLSLLDRDGVTVVDP--------------ASYRIFQYNPPYTLPWLRRNEILVEV 886
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Match: A0A7S0DGY6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGY6_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 1.130e-12 Identity = 42/110 (38.18%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 802 MWFVMPSDITAENAPQPRDESVVVRQIPDGELLAVRAFPGFATGGEVTRQLYTLLGALTREATEPWDESSQSSLWQAQDPSGASYRIMQYNPPYTLPWLKRNEVAVQVIK 1131 M FV+PS+ + + D+ + ++++P G++LAVR FPGFAT E+ RQ LL +++++ + + A D S S+R++Q+NPPYTLPWL+RNE+ +V++ Sbjct: 220 MAFVLPSNFSDSSPAPMADDDITIKKVP-GQILAVREFPGFATDMEIQRQKDFLLSSVSKD-----------NDFVAPDQS--SFRVLQWNPPYTLPWLRRNEICTKVLR 315 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig95.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig95.2.1 >prot_C-tenellus_contig95.2.1 ID=prot_C-tenellus_contig95.2.1|Name=mRNA_C-tenellus_contig95.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=155bp MFFTPMHQCHNDPTACFFVDLRKMWFVMPSDITAENAPQPRDESVVVRQIback to top mRNA from alignment at C-tenellus_contig95:302..5620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig95.2.1 ID=mRNA_C-tenellus_contig95.2.1|Name=mRNA_C-tenellus_contig95.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5319bp|location=Sequence derived from alignment at C-tenellus_contig95:302..5620+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig95:302..5620+ >mRNA_C-tenellus_contig95.2.1 ID=mRNA_C-tenellus_contig95.2.1|Name=mRNA_C-tenellus_contig95.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=465bp|location=Sequence derived from alignment at C-tenellus_contig95:302..5620+ (Choristocarpus tenellus KU2346)back to top |