mRNA_C-tenellus_contig9381.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: D8LNF7_ECTSI (Transmembrane protein 107 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF7_ECTSI) HSP 1 Score: 116 bits (290), Expect = 4.970e-31 Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 1 Query: 1 MRVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMK 243 M++EDRVIPARFLVTLGHL+G ++I KTK DNVYAGL DPT +V +A G VNAALA+A+VCF DF+ +FFGLSIFMMK Sbjct: 1 MKIEDRVIPARFLVTLGHLVGVILISKTKSDNVYAGLSSDPTAAEVATANGHVNAALALAMVCFGLDFMSLFFGLSIFMMK 81
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A835ZGM2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM2_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.710e-30 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 4 RVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGL-GVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 R+E+ +IPARFL TLGH + L++ +K V AGL G P+ + +A +VN AL A+ CFL DF G+ FG S FM KVN LQ +VHF GGVL ++ + EEWDYR++W Sbjct: 4 RIEEALIPARFLTTLGHFLAVLILAGSKATVVNAGLAGGQPSADDIAAANSEVNGALIFALFCFLLDFAGLGFGFSAFMPKVNALQILVHFAGGVLTSRLVVEEWDYRVFW 114
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A7S2UVK1_9STRA (Transmembrane protein 107 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK1_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.820e-30 Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 1 MRVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 M +E R+IPARFL+TLGHLI T+M+ + VYAGL D T ++ +A ++ A+ +A++CFL D +G+ G +IF +VNV Q I HF GG+ V+ FI E WDYR+ W Sbjct: 1 MGLERRLIPARFLITLGHLIPTVMVMYVMEEQVYAGLSADATDKEIAAATAELEGAVLLAIICFLVDLLGLVAGFTIFSTRVNVFQIIAHFVGGIQVSTFIHEVWDYRVLW 111
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A7S3NE17_9STRA (Transmembrane protein 107 n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NE17_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.220e-28 Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 4 RVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 RV + +IPARF++T+GHL+ LMI TK +N++AGL VDP+ ++ A+ + A ++++CF FD GIFFG SIF +K+N+LQ I HF GGV+V+ I + W Y+ W Sbjct: 5 RVLEVLIPARFVLTVGHLVAMLMIAYTKRENLFAGLPVDPSNTRLDKAKKEFEIAYILSLICFAFDLFGIFFGTSIFFVKMNLLQIICHFTGGVMVSLMIEQAWQYQYIW 114
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: F0YLV6_AURAN (Transmembrane protein 107 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLV6_AURAN) HSP 1 Score: 103 bits (257), Expect = 3.550e-26 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 22 IPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 IPARF++T+GHL+ LMI TK +N+ AGL DP + A+ + AA V + CF+FD +GI G S+F K N+LQ I HF GGVLV+ IA+ W Y+ W Sbjct: 2 IPARFMLTMGHLVSLLMIVYTKKENILAGLPRDPGKARYDEAKAEFEAAYVVCLACFVFDMVGILTGTSLFFPKANLLQIICHFAGGVLVSSMIAQSWQYQYIW 105
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A3P3Y2A6_PLABS (Transmembrane protein 107 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2A6_PLABS) HSP 1 Score: 86.7 bits (213), Expect = 1.920e-19 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 1 MRVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 M +E ++P RFL+T HL+ L +F +K N+ A L + TT Q +S ++ AAL +AVVCF+ +++G+F G+SI N + HF G +L+A F E W+ W Sbjct: 1 MGIESTLLPTRFLLTTVHLMAILTLFNSKDANIRAALPISYTTVQYSSMNNQMLAALWIAVVCFIVEYLGMFSGVSIMKHAHNSFYVVAHFIGAILIASFALESWNMLAIW 111
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A8J2S4M7_9STRA (Transmembrane protein 107 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4M7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.310e-17 Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 22 IPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 IPARFL+T+GHL+ L + T+ +N+ + + DP A+ + A A+ +VCF D +GI G S+F K N+LQ I HF G + I + W Y+ W Sbjct: 10 IPARFLLTVGHLVSVLTMVHTRKENLSSAVSADPK-----DAQKEFMMAYAICLVCFAVDVLGILMGTSLFFPKANLLQIICHFVGSCFITSMITQSWQYQYIW 108
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A7S3HJZ1_9STRA (Transmembrane protein 107 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.390e-16 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 7 VEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 V+ +I ARF+ T+GH I L++F T +N+ LG + + + A AAL + +CF+ DF G+FFG S+F N+ +VHF GG+L++ + W+Y+ W Sbjct: 4 VQQYLISARFITTMGHFIALLLLFSTIDNNIDESLGDNYDSEEKQWATETSWAALIIGFLCFVCDFAGLFFGTSLFYNTGNMFHILVHFIGGILLSWVVTYSWNYKALW 112
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A5A8C0J5_CAFRO (Transmembrane protein 107 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0J5_CAFRO) HSP 1 Score: 74.3 bits (181), Expect = 1.310e-14 Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 4 RVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 + + ++P RF++T+G LI TL+++ + DNV + +PTT ++ +A+ V AA AV ++C G+ G S+FM V +LQ + GVL FI W W Sbjct: 5 KTAEIIVPLRFMLTVGTLIATLLVYFHRADNVAVSVAGNPTTAELQAADASVLAAWAVQLICLAISLTGLLGGFSMFMHGVGLLQIVCQLAAGVLTCLFILGSWHIAALW 114
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Match: A0A1S8W9G7_9FUNG (Transmembrane protein 107 n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W9G7_9FUNG) HSP 1 Score: 73.2 bits (178), Expect = 6.070e-13 Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 1 MRVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEGKVNAALAVAVVCFLFDFIGIFFGLSIFMMKVNVLQTIVHFFGGVLVAQFIAEEWDYRLYW 333 M + +IPARFLVT+GHLI T+M F TK N+ + L + +T + E + AAL + + F+ +F G+ G ++F + + + H G + ++ F+ E W Y YW Sbjct: 1 MTILSSIIPARFLVTIGHLIATIMAFLTKDSNIMSALPIS-STLDYRAFEQSLVAALILTWILFVIEFSGLLSGRTMFCTASSTIHIVAHAAGMISLSLFMTEGWHYITYW 110 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9381.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9381.2.1 >prot_C-tenellus_contig9381.2.1 ID=prot_C-tenellus_contig9381.2.1|Name=mRNA_C-tenellus_contig9381.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=112bp MRVEDRVIPARFLVTLGHLIGTLMIFKTKIDNVYAGLGVDPTTFQVTSAEback to top mRNA from alignment at C-tenellus_contig9381:2403..3075- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9381.2.1 ID=mRNA_C-tenellus_contig9381.2.1|Name=mRNA_C-tenellus_contig9381.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=673bp|location=Sequence derived from alignment at C-tenellus_contig9381:2403..3075- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9381:2403..3075- >mRNA_C-tenellus_contig9381.2.1 ID=mRNA_C-tenellus_contig9381.2.1|Name=mRNA_C-tenellus_contig9381.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=336bp|location=Sequence derived from alignment at C-tenellus_contig9381:2403..3075- (Choristocarpus tenellus KU2346)back to top |