mRNA_C-tenellus_contig935.6.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig935.6.1
Unique NamemRNA_C-tenellus_contig935.6.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI)

HSP 1 Score: 518 bits (1334), Expect = 8.610e-176
Identity = 286/646 (44.27%), Postives = 363/646 (56.19%), Query Frame = 1
Query:    7 KRSSKLPRSPITTVKETEDEIFHETLYFDLLALGGGVASGYWAQAISKDLSEKGLTAGIISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIEDSANG--NLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAVAGNKVKASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWWSH 1938
            +RSS L    +  ++ET++EIF E L +DL+ALGGGVA+GYW +                                                          GSGG    P WYK +GIT+L   QA+  DLD+KFL VKR+     G L+   T KV Y  L+IATG RPR+I D      N++  +Q SC C+RHPD+ GSP      D +GFGSVHYLRD GD++KL+ AMGRVEADGQ+TC++ VV+IGGG I+CEVA+A+ +H P + L +V+P E+++   GFGKE+ +FYEKQL+R GV FAK Y V RLW ++EEG FPTLER  Q   +KKT PR+FGPADP+ T CRGVVLS  Q+ E+VWL AR++V+GIGS+PN+DLF  SL  + DG +ITDS LR SH S DVFAAGDVA VP                                                                                               ED S GVDHSA LE MARERP VL +K L KCPL++L+ +PHCL PP+LGVGEFHADTDE+SI +AFRK A   +  K +D+  +M+ LGADWD++E  + LR+LDP  SG V+F  F EWWS+
Sbjct:    7 RRSSALAAQVLEAIRETDEEIFEEILQYDLVALGGGVAAGYWGE----------------------------------------------------------GSGGEAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASN-GELVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATHCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLLARFVVVGIGSVPNSDLFLKSLVLSEDGGIITDSYLRTSHPSGDVFAAGDVACVP-----------------------------------------------------------------------------------------------EDPSSGVDHSAILERMARERPAVLSIKRLRKCPLEKLLDNPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGASTAKRADMASIMQELGADWDEDELEDALRALDPSDSGSVNFSDFVEWWSN 498          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA)

HSP 1 Score: 320 bits (821), Expect = 3.470e-97
Identity = 227/671 (33.83%), Postives = 330/671 (49.18%), Query Frame = 1
Query:   94 LLALGGGVASGYWAQAISKDLSE-----KGLTAGIISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKG----GLLSKQTTKVGYKYLMIATGVRPRRIEDSA------------NGNLAYRIQESCFCS-----------RHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPD-IPLTLVIPRENLLQ------------GLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPN-LTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKL------------PYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAVAGNKVKASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWW 1932
            +L +GGGVA+ + AQA+ +   E     K L   I+S    G++PY+R  +SK  L       LD T+ PS                          L    A+W+       +V +  PD K       ++    ++ Y+ L+IATG R + ++D              NG++     E   C+             P     P  L      GFGSVHYLRD+GD+ K+ +A+   EADGQETC D VV++GGG++  E+A+ I       +P+ +V+ R+ ++              LG  K++  FYE+QL + GVKF + +   RLW +DE G+FPT+E    A  L++T PR F P      ++CRG+V+    S E+ W+ A+ ++L +G  PN+ +F S L  A D S+  D+  R SH+S DVFA GDVAS PL  +  R  R  H   A   A++ A   +    Q S+             P++PVP   S+ LDL W FYG   GE V LG +   + R FG FW+++ ++VG FLE  +    +     E +A  RPR+  +        +  +ADP  + PPELG GEF+A+ D   I  AF KY   G + K   +  +M+ LGADWD EE  E LR+LDP GS  V  + F EWW
Sbjct:    7 VLVVGGGVAAAHVAQALCERAEELPETDKALCT-ILSAYPAGISPYDRSRISKDALDC---TRLDATSFPS------------------------LELPDGVALWSGK-----VVTKCDPDAKKVTYRDAITGDEDEITYEKLIIATGARAKVLDDQPYLWQDKHSDVVDNGSIEEG-GEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQETCSDPVVIVGGGILTMELAAKIARFRGQKVPVNVVLSRDRIMPKVFREDIAPEAGSLG-AKDVAEFYERQLVKCGVKFIREHRCLRLWDVDESGEFPTMEG--PAISLQRTRPRRFEPLQGEYFSTCRGIVVENNHSAERSWIAAKCVILCLGDEPNSQVF-SFLDLADDSSIKVDATCRTSHSSGDVFAVGDVASYPLPRSKERCMRLPHYQQAFSTAVYVAHQCIDAMKQPSRPGTRDSRRSIGGDPFDPVPCITSQVLDLDWVFYGRNVGECVPLGFDG-NSDRYFGCFWVEDMRVVGCFLEGGSD---EEKTICEKIAEMRPRLTRMHKFRSLECEDFLADPLGMEPPELGPGEFNAELDAKYIAIAFDKYGRDG-QAKTQAMGDLMRDLGADWDAEEEKEALRALDPLGSNQVSLECFTEWW 634          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: D7FZW4_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW4_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 9.360e-96
Identity = 206/586 (35.15%), Postives = 299/586 (51.02%), Query Frame = 1
Query:   88 FDLLALGGGVASGYWAQAISKDLSEKGLTAG-------IISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSD-FPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIEDSANGNLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVE----ADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTL--ERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALR----------------VSHAS--RDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVML--------------------YPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADP 1689
            FD++ LGGGV++GYWA+ +   L       G       +++G  DGL PYER  +SK CL P      D+ A  +  FPF   G+    +   WY+++G+T+L S +    D+    L +                              +P+R++   +         +CFC RH DL G  P L K + YG GS HYLRD+GD IKL++A+  V     A G     + V ++GGG++  EVA+AIV+HYP +   L++    L+    F +E+  FYE++L +AGV+  K+    RLW L+E+G+F TL   RV             FGPA    T CRGVVL   + +  + +PAR +++GIG++PN++LF   L  + DG ++ D+  R                V  A+  R ++AAGDVA+ PL L G    R EH+  AR+MA+  AR M+                    Y  G E  + Y PVP F SRFL LSW+FYG  EGE+VVLG   F T+RTFGAFW+++ ++VGAFLE  T   ++   A+  + R RP+V   + L    L   + DP
Sbjct:    7 FDMVCLGGGVSAGYWAEEVVSLLKSGAEQPGFNRPKLCVVTGYPDGLVPYERSEMSKECLRPENNHSRDWQAWGNKVFPFTSTGNDRERRNARWYRDNGVTVLSSCECYEVDVANATLRL-----------------------------YQPKRLQGDQDS--------ACFCVRHSDLRG--PKLDKPEAYGLGSAHYLRDVGDCIKLVKALSTVPSGGGAGGGTGDANTVALVGGGVLCMEVAAAIVTHYPGVRPILLMSGSRLMPDF-FNQEMSDFYEEKLKQAGVRLEKNVTAERLWGLEEQGEFDTLGGRRV------------HFGPAPRGFTECRGVVLRNTE-DCLIHVPARSVIIGIGAVPNSELFRGKLEMSEDGGVLVDAQCRTAVQPPSEDGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFAPVRHEHIQNARDMAICAARNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPM-YQPVPGFSSRFLGLSWRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLEGGT---IEQQIAVAQVTRLRPKVFSSQLLKGSQLGDFLEDP 535          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A7S2SVG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVG3_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.140e-92
Identity = 226/653 (34.61%), Postives = 323/653 (49.46%), Query Frame = 1
Query:  103 LGGGVASGYWAQAISKDLSEKGLTAGIISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATP------SDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAI-WA----DLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIEDSANGNLAYRIQESCFCSRHPDLLGSPP----VLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGL---GFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVL------------SGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAP-DGSLITDSALRVSHASRDVFAAGDVASVPLL--------LAGGRLTRFEHVHAAR-EMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAVAG-NKVKASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWWSH 1938
            +GGG  +G WA +++   + +G    I+S    G+ PY+   L+   + P           P      S      KGSGG      WY+ HG+  L   +   W     + D+  L V ++  DG+   +      VG + +  + GVR     D+A          S     H D++  P      L  S+ YGFGS+H L    D+ K + A+ R E DGQETC D VVV+G G+ A +V + +V   PD+P+ LV+P  +LL  L       +I  FYE+QL++  VK A+ Y V R WA  E G F TLE    A  L+ T PR+F    P     RG+VL            +GA  +  V LPAR  +L     P+T +F S L T P  G+L  D   R       V+A G  A+ PL+        L+G   + +  +   + +MA    R M    G ++ +   P+P     F DL  +F G T GE V++G +     + F   ++++G++VG FLE        H  ALE++ARERP++L VK L K PL QL+ DP CL PPELGVGEF A+ D+ +I +AFR++ + G   VK SDL  +MK LGADWD EE AE   +LDP   G V + +F +WW +
Sbjct:   12 VGGGSVAGRWAASLASHGAAEGSL--ILSHHLQGVYPYDEQQLATTLIDPDARLFSSILTIPWVKDSSSSVEEAAKGSGGVVMDATWYQGHGVEFLWQCEVTAWTKEPQEGDQGELHVLQVLADGRQLQVVCDEFVVGPQ-MDYSHGVRLHEGADAAAS------APSPATDLHADVVIDPENSTVSLTDSNRYGFGSIHTLTSFQDAFKFVVAVTRAEEDGQETCLDPVVVVGDGVEAMQVIAMLVKFLPDLPVVLVLPGGSLLPSLIPRAVPSDIRDFYERQLTKNNVKIARGYEVVRPWATTETGSFSTLEG--PASGLQPTRPRNFESCQPQFVQSRGLVLQRVQLDNESEMGTGADQQGLVHLPARMALLLPRPSPSTSIFSSLLPTDPATGALEVDDRFRTPVPG--VYAVGGAAAFPLVDGTAATDGLSGATNSHWTPLLPTQWDMAEAVGRDMA---GTQAPIAPTPIPHADMSFFDLHCRFRGVTSGEPVMVG-DTTGRPKFFACVFVRQGRLVGIFLEGGDQ---SHDEALEVIARERPQILSVKKLRKLPLPQLMTDPFCLVPPELGVGEFVAEVDDEAIQEAFRRFDITGAGCVKTSDLAALMKELGADWDAEEQAEAQEALDPFEKGSVSYASFVDWWKN 644          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A7S2UXU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU9_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.150e-53
Identity = 107/272 (39.34%), Postives = 154/272 (56.62%), Query Frame = 1
Query: 1180 LSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVM---LY------PEGQESKL--------PYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAV--AGNKVKASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWWSH 1938
            + T+P G LI D+  R +H S D+FAAGDVA  PL L GG +    HV  AREMA   A+ M   LY      P   + +         P+ PVPSFYSR L+L W FYG  +GE VVL +E +   + FG FWL++ ++VGAFLE  T+   +    L  +A  RP V  +K   +  L + + +P  L+P  L  G+F A+T  + + + F  + +    ++VK   L+ +MK LGADW+K E AE  R+LDP G G+V ++ F +WW++
Sbjct:    1 METSPGGHLIVDNFCRTTHYSGDIFAAGDVACFPLELEGGEMVNHSHVQNAREMAQFVAQCMADPLYESTANTPSAVQERAASVGNRGQPFQPVPSFYSRVLELHWNFYGIAQGEPVVLDLEHYEERKRFGVFWLRDNRVVGAFLEGGTA---EEHEILRDVAVSRPEVRSIKMFRRADLQEFLDNPRFLAPDSLEPGDFAAETHSNIMHEVFHGFEIKPGSSRVKLEHLEPIMKELGADWNKTELAEAYRALDPHGLGVVSYNVFCQWWTN 269          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A1Y1I917_KLENI (Monodehydroascorbate reductase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I917_KLENI)

HSP 1 Score: 194 bits (494), Expect = 6.710e-52
Identity = 166/519 (31.98%), Postives = 234/519 (45.09%), Query Frame = 1
Query:   88 FDLLALGGGVASGYWAQAISKDLSEKGLTAGIISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFP--FVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIEDSANGNLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGME-AFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRV 1635
            F  + +GGGVA GY A   +K   + G  A IIS +   +APYERPALSKG L P           P+  P    C G GG +  P WYKE+GI L   ++ + ADL  K L         KG     +T K  Y+ L+IATG     ++D                             FK        ++Y+R+  D+ KL +AM       Q+     V+V+GGG I CEV + +  +  D+  T+V P  +L+  L F  EI  FYE      G+K  +      +  +  +G+                         PN   C        + ++   LPA ++V+GIG+ P   LF   L  A  G  + D   + S    DV+A GDVA+ PL +  G LTR EHV  AR+  +   + +   E  ES   Y+ +P FYSR   LSW FYG   G++VV G E A      FGA+W+ + ++VGAFLE  T    D +  +  +AR+RP V
Sbjct:    4 FKYVIVGGGVAGGYGAWEFTKHGLQPGELA-IISKE--KVAPYERPALSKGYLFP---------ENPARLPGFHTCVGGGGPKGLPEWYKENGIELKLDTEVVKADLKSKTLTTD------KG-----ETIK--YEKLIIATGAGVINLKD-----------------------------FKMPGADADGIYYIREEEDAAKLYEAM-------QKHKGAKVIVVGGGYIGCEVGAGLSLNGLDV--TIVYPEPHLMPRL-FTPEIASFYEGYYEAKGIKVFRGRLAAAI--VQHDGQ-------------------------PNKIQC-------VRMKDGEELPADFLVVGIGARPRVGLFEGQLEMAKGGFKV-DGNFKTSEP--DVYAVGDVAAFPLKMKDGELTRVEHVDNARKSVMQAVQAIKAEEKGESIPEYDYLPYFYSRVFKLSWVFYGENVGDVVVWGREEAIKEGGKFGAYWVNDKKVVGAFLESGTP---DDNKLMSEVARKRPSV 418          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A7S2SXC4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXC4_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.410e-50
Identity = 131/350 (37.43%), Postives = 183/350 (52.29%), Query Frame = 1
Query:  958 LDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVL------------SGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAP-DGSLITDSALRVSHASRDVFAAGDVASVPLL--------LAGGRLTRFEHVHAAR-EMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAVAG-NKVKASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWWSH 1938
            + E G F TLE    A  L+ T PR+F    P     RG+VL            +GA  +  V LPAR  +L     P+T +F S L T P  G+L  D   R       V+A G  A+ PL+        L+G   + +  +   + +MA    R M    G ++ +   P+P     F DL  +F G T GE V++G +     + F   ++++G++VG FLE        H  ALE++ARERP++L VK L K PL QL+ DP CL PPELGVGEF A+ D+ +I +AFR++ + G   VK SDL  +MK LGADWD EE AE   +LDP   G V + +F +WW +
Sbjct:    4 ITETGSFSTLEG--PASGLQPTRPRNFESCQPQFVQSRGLVLQRVQLDNESEMGTGADQQGLVHLPARMALLLPRPSPSTSIFSSLLPTDPATGALEVDDRFRTPVPG--VYAVGGAAAFPLVDGTAATDGLSGATNSHWTPLLPTQWDMAEAVGRDMA---GTQAPIAPTPIPHADMSFFDLHCRFRGVTSGEPVMVG-DTTGRPKFFACVFVRQGRLVGIFLEGGDQ---SHDEALEVIARERPQILSVKKLRKLPLPQLMTDPFCLVPPELGVGEFVAEVDDEAIQEAFRRFDITGAGCVKTSDLAALMKELGADWDAEEQAEAQEALDPFEKGSVSYASFVDWWKN 342          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: A0A7J7DKH8_TRIWF (Monodehydroascorbate reductase cytoplasmic isoform 2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DKH8_TRIWF)

HSP 1 Score: 191 bits (484), Expect = 4.640e-50
Identity = 170/528 (32.20%), Postives = 247/528 (46.78%), Query Frame = 1
Query:   88 FDLLALGGGVASGYWAQAISKDLSEKGLTAG---IISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIED-SANGNLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSK 1659
            F  + LGGGVA+GY A     + + +G+  G   IIS +   +APYERPALSKG L+P      D    PS     C G+G  + TP WYKEHGI L+  ++   AD       V+R+       LL+     + YK L+IATG R  ++E+   +G+ A                               +V YLRDL D+ +++  M       Q       VVIGGG I  E A+++V +   I +T+V P E  +  L F  +I  +YE+     GV+F K   +T  +  D EG+   +                              +  G Q      LPA  +V+GIG  PNT LF   L T   G +  +  L+ S++S  V+A GDVA+ P+ L G  + R EHV AAR+ A H    ++ P   +    ++ +P FYSR   LSW+FYG   GE+V  G  +    +TFGAFW+ +G +VG+FLE  +    +   AL    R +P + D+  L +
Sbjct:    5 FVYVILGGGVAAGYAA----LEFTRRGVNPGELCIISEE--PVAPYERPALSKGYLLPE-----DPPRLPSFH--TCVGAGEEKLTPKWYKEHGIELVLGTRVKSAD-------VRRMT------LLTVAGETISYKTLIIATGARALKLEEFGVHGSDAE------------------------------NVCYLRDLADATRIVDVM-------QSCSGGKAVVIGGGYIGMECAASLVIN--RINVTMVFPEEQCMARL-FTPKIASYYEEYYKSKGVEFVKGTVLTS-FKFDSEGRVTAVN-----------------------------LRDGKQ------LPADMVVVGIGIRPNTSLFEGQL-TLEKGGIKVNGRLQSSNSS--VYAVGDVAAFPVKLFG-EIRRLEHVDAARKSARHAVAAIMNPNETDE---FDYLPFFYSRVFTLSWQFYGDNVGEVVHFGDYS---GKTFGAFWVFKGHLVGSFLEGGSK---EEYEALAKATRLKPAIEDLSELER 417          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: UPI001CC353CE (monodehydroascorbate reductase 4, peroxisomal-like n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC353CE)

HSP 1 Score: 189 bits (481), Expect = 1.330e-49
Identity = 170/528 (32.20%), Postives = 240/528 (45.45%), Query Frame = 1
Query:   88 FDLLALGGGVASGYWAQAISKDLSEKGLTAG---IISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIED-SANGNLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSK 1659
            F  + LGGGVA+GY A   SK    +G++ G   IIS +   +APYERPALSKG L+P      D    PS     C G      TP WYKEHGI L+  ++   AD+ +K L             L+     + YK L+IATG R  ++E+   NG+                              G  +V YLRD+ D+ +L+  M       Q       VVIGGG I  E A+++V +   I +T+V P    +  L F   I  FYE    + GVKF K   V   +  D  GK   +                             V+  G +      L A  +++GIGS PNT LF   L+    G  +      +  + R V+A GDVA+ P+ L G  + R EHV +AR+ A H    ++ P+ +   L Y  +P FYSR   LSW+FYG   GE+V  G  +    ++FGA+W+ +GQ+VG+FLE  T    +   A+  + R RP V D+  L +
Sbjct:    5 FVYVILGGGVAAGYAALEFSK----RGISHGELCIISEET--VAPYERPALSKGFLLPE-----DPARLPSFH--TCVGVNEERLTPKWYKEHGIELVLGTRVKSADVKRKTL-------------LTAAGETISYKILIIATGARALKLEEIGVNGS------------------------------GAENVCYLRDITDATRLVSVM-------QSCVGGNAVVIGGGYIGMECAASLVIN--KINVTIVFPGAYCMARL-FTPRIATFYEDFYKKKGVKFIKG-TVLSSFENDSRGKVTAV-----------------------------VLRDGTR------LSADMVMVGIGSHPNTSLFEGQLTLEKGGIKVNG---HMQTSDRSVYAVGDVAAFPVKLFG-EIRRLEHVDSARKSARHAVAAIMAPD-KAGDLDY--LPFFYSRVFTLSWQFYGDNVGEVVHYGDFS---GKSFGAYWINKGQLVGSFLEGGTK---EEFEAIAKVTRLRPLVSDIAELER 417          
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Match: UPI001C4F3C21 (monodehydroascorbate reductase 4, peroxisomal n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001C4F3C21)

HSP 1 Score: 188 bits (477), Expect = 4.660e-49
Identity = 169/530 (31.89%), Postives = 240/530 (45.28%), Query Frame = 1
Query:   88 FDLLALGGGVASGYWAQAISKDLSEKGLTAGIISGDC-----DGLAPYERPALSKGCLVPGLEKLLDYTATPSDFPFVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKGGLLSKQTTKVGYKYLMIATGVRPRRIED-SANGNLAYRIQESCFCSRHPDLLGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVVVIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQLSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPADPNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDGSLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALHCARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAFPTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKHLSK 1659
            F  + LGGGVA+GY A   SK        AGI  G+      + +APYERPALSKG L+P      +  A P  F   C G+     TP WYKEHGI L+  ++   AD+ +K L             L+     + YK L+IATG R  ++E+   NG+                              G  +V YLRDL D+ +L+  +       Q       VVIGGG I  E A+++V +   I +T+V P  + +  L F  +I  +YE    R GV F K   V   +  D  GK   +                             ++  G Q      L A  +V+GIG  PNT LF   L T   G +  +  ++ S++S  V+A GDVA+ P+ L    + R EHV  AR+ A H    ++ PE       ++ +P FYSR   LSW+FYG   GE+V  G  +    ++FGA+W+ +GQ+VG+FLE  T    +   A+  + R RP V D+  L K
Sbjct:    5 FVYVILGGGVAAGYAALEFSK--------AGISHGELCIISEEQVAPYERPALSKGFLLP------EDPARPPSF-HTCVGANEERLTPKWYKEHGIELVLGTRVKSADVRRKTL-------------LTAAGETISYKILIIATGARALKLEEFGINGS------------------------------GAENVCYLRDLADATRLVSVI-------QSCVGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-FTPKIASYYEDFYKRKGVTFLKG-TVLSSFEHDSSGKVTAV-----------------------------ILTDGTQ------LTADMVVVGIGIRPNTILFEGQL-TLEKGGIKVNGHMQTSNSS--VYAVGDVAAFPVKLFQD-IRRLEHVDLARKSARHAVAAIMTPEKTGD---FDYLPFFYSRVFTLSWQFYGDNIGEVVHYGDFS---GKSFGAYWVNKGQLVGSFLEGGTK---EEYEAIAKVTRLRPMVEDITELEK 417          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig935.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA9_ECTSI8.610e-17644.27Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A7S4A4F3_9STRA3.470e-9733.83Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D7FZW4_ECTSI9.360e-9635.15Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2SVG3_9STRA2.140e-9234.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UXU9_9STRA1.150e-5339.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Y1I917_KLENI6.710e-5231.98Monodehydroascorbate reductase n=1 Tax=Klebsormidi... [more]
A0A7S2SXC4_9STRA3.410e-5037.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7J7DKH8_TRIWF4.640e-5032.20Monodehydroascorbate reductase cytoplasmic isoform... [more]
UPI001CC353CE1.330e-4932.20monodehydroascorbate reductase 4, peroxisomal-like... [more]
UPI001C4F3C214.660e-4931.89monodehydroascorbate reductase 4, peroxisomal n=2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig935contigC-tenellus_contig935:7201..14842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRA9
Preferred nameMDAR1
PFAMsPyr_redox_2
Model size1941
Max annot lvl2759|Eukaryota
KEGG koko:K08232
KEGG ReactionR00095
KEGG Pathwayko00053,ko01100,map00053,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0006950,GO:0006970,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0009941,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010319,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0016656,GO:0016999,GO:0017001,GO:0017076,GO:0017144,GO:0030554,GO:0031090,GO:0031903,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042579,GO:0042737,GO:0042743,GO:0042744,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043903,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050789,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0065007,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0097367,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:1901265,GO:1901363,GO:1901700,GO:1990748
Exons13
Evalue1.41e-176
EggNOG OGsCOG0446@1|root,KOG1336@2759|Eukaryota
Ec32 ortholog descriptionMonodehydroascorbate reductase-like
Ec32 orthologEc-26_002470.1
EC1.6.5.4
Descriptionmonodehydroascorbate reductase (NADH) activity
Cds size1941
COG categoryJ
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig935.6.1prot_C-tenellus_contig935.6.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig935 7201..14842 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790171.5967116-CDS-C-tenellus_contig935:7200..73381680790171.5967116-CDS-C-tenellus_contig935:7200..7338Choristocarpus tenellus KU2346CDSC-tenellus_contig935 7201..7338 +
1680790171.6295326-CDS-C-tenellus_contig935:7641..77241680790171.6295326-CDS-C-tenellus_contig935:7641..7724Choristocarpus tenellus KU2346CDSC-tenellus_contig935 7642..7724 +
1680790171.6423163-CDS-C-tenellus_contig935:7867..80031680790171.6423163-CDS-C-tenellus_contig935:7867..8003Choristocarpus tenellus KU2346CDSC-tenellus_contig935 7868..8003 +
1680790171.6525471-CDS-C-tenellus_contig935:8316..84361680790171.6525471-CDS-C-tenellus_contig935:8316..8436Choristocarpus tenellus KU2346CDSC-tenellus_contig935 8317..8436 +
1680790171.6623583-CDS-C-tenellus_contig935:8694..87841680790171.6623583-CDS-C-tenellus_contig935:8694..8784Choristocarpus tenellus KU2346CDSC-tenellus_contig935 8695..8784 +
1680790171.6738405-CDS-C-tenellus_contig935:8979..91381680790171.6738405-CDS-C-tenellus_contig935:8979..9138Choristocarpus tenellus KU2346CDSC-tenellus_contig935 8980..9138 +
1680790171.6835077-CDS-C-tenellus_contig935:9687..98701680790171.6835077-CDS-C-tenellus_contig935:9687..9870Choristocarpus tenellus KU2346CDSC-tenellus_contig935 9688..9870 +
1680790171.6927202-CDS-C-tenellus_contig935:10376..105741680790171.6927202-CDS-C-tenellus_contig935:10376..10574Choristocarpus tenellus KU2346CDSC-tenellus_contig935 10377..10574 +
1680790171.7105193-CDS-C-tenellus_contig935:10881..112011680790171.7105193-CDS-C-tenellus_contig935:10881..11201Choristocarpus tenellus KU2346CDSC-tenellus_contig935 10882..11201 +
1680790171.724706-CDS-C-tenellus_contig935:11596..117351680790171.724706-CDS-C-tenellus_contig935:11596..11735Choristocarpus tenellus KU2346CDSC-tenellus_contig935 11597..11735 +
1680790171.7340026-CDS-C-tenellus_contig935:12326..124191680790171.7340026-CDS-C-tenellus_contig935:12326..12419Choristocarpus tenellus KU2346CDSC-tenellus_contig935 12327..12419 +
1680790171.7469933-CDS-C-tenellus_contig935:13311..134461680790171.7469933-CDS-C-tenellus_contig935:13311..13446Choristocarpus tenellus KU2346CDSC-tenellus_contig935 13312..13446 +
1680790171.760086-CDS-C-tenellus_contig935:14695..148421680790171.760086-CDS-C-tenellus_contig935:14695..14842Choristocarpus tenellus KU2346CDSC-tenellus_contig935 14696..14842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig935.6.1

>prot_C-tenellus_contig935.6.1 ID=prot_C-tenellus_contig935.6.1|Name=mRNA_C-tenellus_contig935.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=647bp
MCKRSSKLPRSPITTVKETEDEIFHETLYFDLLALGGGVASGYWAQAISK
DLSEKGLTAGIISGDCDGLAPYERPALSKGCLVPGLEKLLDYTATPSDFP
FVCKGSGGTEQTPHWYKEHGITLLCSSQAIWADLDKKFLIVKRICPDGKG
GLLSKQTTKVGYKYLMIATGVRPRRIEDSANGNLAYRIQESCFCSRHPDL
LGSPPVLFKSDEYGFGSVHYLRDLGDSIKLLQAMGRVEADGQETCRDAVV
VIGGGLIACEVASAIVSHYPDIPLTLVIPRENLLQGLGFGKEIGYFYEKQ
LSRAGVKFAKSYCVTRLWALDEEGKFPTLERVPQAPLLKKTLPRSFGPAD
PNLTSCRGVVLSGAQSEEQVWLPARYIVLGIGSIPNTDLFHSSLSTAPDG
SLITDSALRVSHASRDVFAAGDVASVPLLLAGGRLTRFEHVHAAREMALH
CARVMLYPEGQESKLPYNPVPSFYSRFLDLSWKFYGFTEGEMVVLGMEAF
PTSRTFGAFWLKEGQIVGAFLEEDTSLGVDHSAALELMARERPRVLDVKH
LSKCPLDQLIADPHCLSPPELGVGEFHADTDESSIVDAFRKYAVAGNKVK
ASDLDQVMKVLGADWDKEEFAEVLRSLDPCGSGMVHFDAFKEWWSH*
back to top

mRNA from alignment at C-tenellus_contig935:7201..14842+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig935.6.1 ID=mRNA_C-tenellus_contig935.6.1|Name=mRNA_C-tenellus_contig935.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=7642bp|location=Sequence derived from alignment at C-tenellus_contig935:7201..14842+ (Choristocarpus tenellus KU2346)
ATGTGTAAACGTAGTTCTAAACTGCCTCGATCTCCGATCACAACGGTAAA GGAGACCGAGGACGAAATATTCCACGAAACTCTCTACTTTGATCTGCTGG CTCTGGGCGGAGGAGTGGCTTCGGGTTATTGGGCACAGGTGGGGGTCGCT GCACTTTGTAACAAGGCAAAATCACCAAGGAAGATTACAAATGTTTGTCA TCGAGGCCTCAGACGACGATCCAAAAACTATGTAATACTCCCAGCACGCT TTTTGTAGTGCTACGTGTTGCCAGCAACTTCGAAGGAAGTGCGCATTCCG TGCTGAGAAACAAGATGTTGCCACAATGGAGGAGTTGAGGACGTTTTGCT TCAGTACACTTTACAATGCTTATTCATATCAACAATAACCCTCGTGTGTA GTCTAACTTGTTTGCCTCTCACAAATATCTGAATGAACCAGGCGATATCT AAGGATCTCTCCGAGAAGGGATTAACAGCTGGTATAATCTCAGGAGATTG TGATGGGCTGGCTCCTTACGAGAGGTACAGGGATGAGGATTATGCGCTTG TTTCACAGGTGTCAAGTGCAGCTCTCATAGAATTTAGTGTTCATGTCAAC AACAGTCAATTTGGCATATTTATGTTGACCTATAAAATCATCCCTCTTCT CGATATGAACCCTTCAGACCAGCTTTGTCCAAGGGATGTCTTGTTCCGGG CTTGGAGAAACTACTTGACTACACGGCAACTCCATCTGACTTCCCGTTCG TGTGTAAGGGGTCGGGTGGGACTGAACAGACACCTCATTGGTACAAAGAA CACGTGAGAAAAGACTACCACATACATTGAAGTGTAACCCGTGCCCAGGC CATCACTTTTCTCAAGTGATTCGACACCACATAATAATCCTGCTAAAACA ATGTTCCCTGTGTAAACCATGTATCAACAAAATATCTCACTAACGCCTTG TTCGATGATAGTAAAAAAAGATTTCTCAGGAAAATGTCTACTCTCTCAAG TAGCACAAACATCGATATCAAGCAGTATGAGTATGTTTTGGTCATTATCC ATTCACCAAGATATCATCTGTGCACCACAATCTAAATTATGTACATGGAT GTCCTGCCAAGAACAGGGTATCACATTGTTGTGCAGCTCCCAGGCCATCT GGGCCGACCTCGACAAAAAATTCCTTATTGTGAAGAGGATTTGCCCTGAT GGCAAAGGGGGTCTCCTGTCCAAACAAACAACTAAGGTACAATACACTCT GACAACAGCCATTGAGTCAAACTAGTTCTTCACTAGTATGATATATTATA TTGGACAGACAAAAGGGGTTGTCTGACACATGTCAGACAGGGCCACAATG CCTGCACCTGCACGAAATAATAAGAACACTTTCACTTGACACTACTCTGG CACTATGTACTTCAAAAGCATGTGGAAGGCACTAGGCTTTCCGCCTCAAA GGGCCCAACTATTTGTACACGTCGATGTGCTCATTATCCCACAGGTGGGA TACAAGTATTTGATGATTGCCACGGGAGTAAGGCCCCGGCGCATTGAGGA TAGCGCCAATGGCAACCTGGCTTACAGAATCCAGGTGCAATAAAAGAAAA ATGCCCTTGACATATTTGCACCATTGGTGCCAGGAGGGAAGACTGACTAT TACAGGTGTCACAAAAGGTTGTATTATTTTTAGATGTTGCCAAACTCATA CCTTACCAACTTCTGCTAATTGCTTCATCTCTTCCTCTCCTCCCTACCAT ATGCATTTACATTGACATTGACATTCAAGGAGTCCTGTTTTTGTTCGCGA CACCCAGACCTATTGGGATCTCCTCCTGTGCTCTTCAAGTCAGATGAGTA TGGCTTCGGGTCAGTGCACTATCTCCGGGACCTGGGAGACTCCATCAAAC TCCTACAGGCCATGGGTAGGGTGGAGGCTGATGGACAGGTTAGATGGGCA CCGCTATTTGTGTGAGGTGTCAAATGTCAGATGAAGGAGTGCACTTTGAG CCTCAGAGATAAAATAAGAAGATGCGAGGGATTGGAGATAAAATATTCTA CCTCCAGGTTCAAAGTGTATGGTTGCATTTCTGTTGGAGGTAGTTCTGAT ACTTGATGGAAAGCTGGTAACAACAAAGAGAGGAATTACTTCAATAAGTG ACCTCCTCACTGCTAGGAAGGGTCGATATTTGTGTTGCCATCCATATCTA ATGACAGAGTTAATGTTTGATAAGAGGGGGGGGACGAGTTCAGAGCACAG GGCTGAGGAGAGTAGTATGAGAATAAGATATATTTTCACAAAGCCTTGTA CCAGTACCTCTACGATCTGAGAGCTCTACTTTTGTTGTTATCTTCACCTG GGCAGGGTGAATCATGAATTGGTTCAGATCCCTAGTAATTTGAACATAGG ACCAGAACATTCACCTGCACCTGACTTGTCATTGTGCACTAACCCTACTT TTCCAAATGTTCTCATTGTTTTGATACGTTATCACAGGAGACCTGTCGAG ATGCAGTGGTAGTGATTGGTGGTGGGCTGATAGCATGTGAGGTGGCATCA GCCATAGTATCTCACTACCCTGACATTCCATTGACACTAGTCATTCCAAG GGAGAACCTGCTGCAGGGGTTAGGCTTCGGTAAAGAGATTGGGTATTTCT ATGAAAAGCAGCTCTCAAGGGTACGGCTTTAAGACTGTATTGTAGACCTT GACCAATGTTTCCACTAGTTGATCCAATTTTCTTGTTTGTGGTGAGGGGT GATACTAGATGGACATCTTCTGAAAGGTGTAGGCATGGACTGAAGAAGAG CAGTGTTCCCTTGAGAATATAGGTGGTACTCAGATGTGCACACTATGTAT TTTGGGCATGGAAGTCCTGAAGGGGTTGGGTTCATGAAGAACAACCCAAA TCCTCCCTAAGAGCCCATCATGAATTGATTCAATTTCTAATCTCCAAGTG CTTTCAGTCATATACTTCAACGCATTTCCCTACCAACATTCCTTATGCCC TTCCTTGCAGCATCCGGTTGCTTGATTGCAAAATGCAAAGGATGGCATCA TCTAAACAATTTAAATTTATCGGTGGTAATAGCCTGCAGCAGAGAGTGAC ACATTTCATAATATAATGTTATCGTGCACCTACTGCTGTTAATTCCTGTA CATCCCACCCCTACATCAACGGCAAGGCTGGCGTGAAGTTTGCCAAGAGC TATTGTGTTACCCGTTTATGGGCCCTGGATGAGGAGGGGAAGTTTCCTAC ACTTGAACGGGTGCCACAGGCACCATTGCTGAAGAAAACACTCCCACGAT CATTTGGACCAGCTGATCCTAATCTTACCTCCTGCAGAGGTGTGGTTTTG TCTGGCGCACAAAGTGAGGAACAGGTATGAGAGAATTTGAGGTGAACAGT CTTGTCCAGGGCGAGGAAAATTAGGCTAATCCCCCTCAAATCAGTCACCA TCTACTGGCCATCCTGTCGCTGTTCCTCACCCCCTTATTAGAGGTGGATG CATACTTATTTCAATTAATTATCCAAATCTTTATAATTACATGTTTGTCC TTAGGAGTAGACTGGTGGTTTGTGTGCCAACAGTTATCCTTCTGCTCTCT CCTCAAACAACATCCAATTCATGGTATTGTTATCCATCCCTTAACTTTAC TTCCTTCCCCCTTTGCCCCAAACCGGTCAAGGTGTGGCTACCAGCAAGAT ACATTGTTTTGGGAATCGGCTCCATTCCCAACACGGACTTGTTTCACAGT TCCCTTTCCACAGCCCCAGATGGCAGCCTTATCACAGACTCTGCATTGCG TGTAAGTCATGCCTCCAGAGATGTCTTTGCAGCTGGTGATGTGGCATCTG TACCTCTGCTGCTGGCTGGTGGGAGATTAACTCGCTTCGAACACGTTCAT GCTGCCCGGGAAATGGCTCTGCACTGTGCCAGAGTCATGTTGTACCCTGA GGGACAAGAATCAAAGTTGCCTTACAACCCTGTGCCATCCTTCTACTCCA GGTATGACAATTGTAATAGTATGGGAAATGTATAACATAGTTGTGAAAGG AGAGGGGAAAAGTTTATGCTCTACAGTTGTTTCTGTGAAGGAGGGAACAA AATTTTGCTTTGATCCATCTAATACATGATTCAACTTGAGAGATAATCTG CATTGTATGTTGGTGTTTATCAAATAAGGCTATGAGAAATATAAGCACCT GATCCCCCAGGGCATATTACACCCGCCTTCCACAGAGGATGTCAGCATTG TGAGTCGTGTGTCCTGGCCAGGGATTTAAAATATCCTAGAGCATATGTCA GGATAGAGTGGGTGATACAATATTGTCTGGTGGAACGACTGTAACGCAGG CAGTGACAAAGTACACAAGACATTATGACATTCATATGTTCAACAGGTTT TTGGATCTGTCGTGGAAATTTTACGGCTTCACAGAGGGAGAGATGGTTGT CCTGGGCATGGAAGCATTTCCTACATCACGGACATTTGGTGCTTTCTGGC TCAAGGAAGGACAAATTGTTGGTGCTTTCCTTGAGGTACTACTGTATTGT AGCTGAAGGCACCATTCCAATGTTAGTCATACAATTACAAAGCTGGAATT ATGATCGTTGAAACAGTTTTGACCATTGAACTTCCGCTTGTGACACTATT CTATTTCAGCATACATGTAATTTTTTCCTATGAGTATTGCACCATCTCAT GGGATTGTTCCACCGTTGGTTGATTCATTTAGTTGACATTTGCCCCAAAC TGTTTTGAAGCATCACAACAGGGTTTTGTTCGTATATCCTGCTATAGCAC CCCTGATGTGTCTCTCTGGATGATGGTTTTATCTTGACACATCAAAATTT GGATTTGGAAAGGTACTAATAGTTCCAGCACAATGAAGAGAGGATTGCTG TGAATTCCCAGGAGGGACCGAGATAAATGACCCTCTACAGGCTCACAGCT GTGTAGTTCTCCCTTTTATCACTAGCCCCTGTAGTGAAGCACACCTTTCA CCTTTCACATTTGTCAGTTCTTGATGAGTGCAGCACCCTAAACCGTTATG ATTGAGTGTCCCCCTCAATCCCTGCGGATTGATTCTTTGGATATTTGACC ATGTATTGATTGTGGACTGACTGCAGGAAGACACTTCCTTGGGGGTGGAC CATTCTGCTGCGCTTGAGCTCATGGCAAGGGAGAGACCTCGTGTACTTGA TGTTAAACATCTGAGCAAGGTTGGTGGTACATTCTACCAATGCCTTGGAC AGTGAGGTGTTGGAATTGAAGTGAGCAAGCAAAGTCACAAATGTGTTACA CTTCAAAGAAGTGCATCTGAAGTGACTAACACTAAAACATTTAGAGCACA CAAAGTCAGTGTTACCGACAAGCGGTCCTTACAATTGTGATACTACCCCA GGGTACTTTTCAAGTGATCTTTATTCTTTCAACTCGTCCGTGTTATGGGA TAACAACTGGTTGACATTGAATGCTCATTGCCTTGTAACACAATAGCCTG TGTATCACTGACAGCCTTGTTGGCCCGTTAGTTTATACACCACACTCTCA AGAACTGTCATTCATAATCATGTGCTACATACACTATGCAAACAGTGTCT TGATCCTTCCTTACAGAAAAAAATACCTGATATTTTACTTGTCCTCTTAA AATCAGACAGTACCAAGCTTGGTCAGTGGACAGTTCTCTTTCTTGAGAAC GAATACCTGACTCCCTTGCATTGAGGACATTGGTGCATGGTGATGATCAA AGCACACCTCATCTCTTAGACCTCAAAAGGGGAGTGCTGTGGCGTGAATG TGTAGTGGGTGCTTTGTCTTGAATTTGTCTCTTCCGCCTACGAAAAATGT TAACAATAATTGGAAGGGCGTTCTTAATCATATGGATGCATTCTTCGTAT TTCCCTTTTCTTTCCTCACATCACCATGTTTTCCATTAAAAGACCGAGGA TTTAACTGGTAGAATTGTGCTTGCATAGACAGCTCAGGGATAAACTCGTA TTGAAGCAACATTGATGGGTATTTTGCATTACCAAAGGTCATTCATAATA TTGCATCTTTATTGGTCCGATCTGCTATCTTCTACCCCCTCCTCCCCTCC CCTATTTCCAGTGCCCCCTGGATCAGCTCATTGCTGATCCACACTGCCTG AGTCCTCCGGAGCTGGGTGTAGGGGAGTTCCATGCTGATACAGATGAATC CAGCATTGTTGACGCCTTTCGCAAGTATGCTGTGGCAGGAAATAAGGTAA CTAACTGTTTGATTTGCTATTTGATTTGCTGTTCGTTTGCTGTTTCAGTT ATGCTACTATCTGATAACTACTTGAAGTAGTTAGCAATGCATCCTATTCT GCAACCCAAGTTTTGAAGTGGATTGATGAGTCACCCAAGCATTTCATGCC TTGCACAAATCCTTCCTTCCTGCGTATATGTTGCCAAAATGAGAAACTGC GGGCTGTAGATATGCTTAGTAGATAATACATGCAATGAACGCGGAGACCA ATATGTCTATTAGGTTGCGGTCAGGTGCAGATTAGTTGTATATTCCCCTG TTGGAGTAGGTTTACTTGTCTGCCATGCAGCTAACTTACCACTGATCCCT TTGGTGGAGAGTGTATGGATATCAGGTCAGCATCAACTATACACTACTGT CCAGACAAAAGAAAAACTGATGCATGGTAATATGTTTTGGAGGGGTATTT CACGGTAAAGTGTTTTAGACTATGAACTGACTTATGTGCAACTTTAGGCA TACTGTAGGATATACAACTAAGAGTCCATCACAGAGAGTGTTGAAACATT ACCATGTACACTTCTGTACCTCCTAGAGACATTGGCGTTGACATTGACAC ACCACAAAGATGACTCCTGTTCCTTCATTCTGACTTTGATATGTGAAATA ATGACAGGCACACTTACATTGATTTTAGCAGTGAATACAGGTTTGTTCAG ATGGTGACATCAAATCTGGGGCTTCCAGTTCAGTTTAGTTGATGCCAAGT ATATTGATACTATAACTGGTTGGGCATTAGTGAGGGGAGCTTACCTTCGC TTGTTCCTCTCTATTCTAGACAGTCTTCTTGCCTGTGGCCTTAGGGCTGC TATAGTGCCATTCTCAATCTCTAAGCTCTCGAGTTGTTTCTGATATGAAA AATACTCAAAGTAACTCCGTTTGATGCAACACAACCAATATTCAAGAAGT AAAATGGCAGGTCGCTTATTGTTTCTTATCATCTCCACAGATCAGGAAAA ATTACAGTGAAAGCTCACAATAATACATATATAGGGATACTGCATATGGC TGTGTAAACAAATGCAAGATCAGTTCACAGTCACTTCACAGTCACTTCAC AGTCACAGACCTCCATGAAAATAAATAATAAATGGAGCGTTAGCCTCAAC ATCTTGGTTGGAAACACGAATTGAAGCCCCAGAACTGAAGTCGGTATTTT CCTTAAAGTTTTTCTTTTTTATTGGTCTTGTTTTCTCGTGCACAGGTTAA GGCATCAGATCTTGATCAAGTTATGAAGGTCCTTGGTGCAGACTGGGATA AGGAAGAGTTTGCCGAAGTGCTACGATCGTTGGACCCTTGCGGTTCAGGC ATGGTTCACTTTGATGCATTCAAGGAGTGGTGGTCTCACTAA
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig935:7201..14842+

>mRNA_C-tenellus_contig935.6.1 ID=mRNA_C-tenellus_contig935.6.1|Name=mRNA_C-tenellus_contig935.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1941bp|location=Sequence derived from alignment at C-tenellus_contig935:7201..14842+ (Choristocarpus tenellus KU2346)
ATGTGTAAACGTAGTTCTAAACTGCCTCGATCTCCGATCACAACGGTAAA
GGAGACCGAGGACGAAATATTCCACGAAACTCTCTACTTTGATCTGCTGG
CTCTGGGCGGAGGAGTGGCTTCGGGTTATTGGGCACAGGCGATATCTAAG
GATCTCTCCGAGAAGGGATTAACAGCTGGTATAATCTCAGGAGATTGTGA
TGGGCTGGCTCCTTACGAGAGACCAGCTTTGTCCAAGGGATGTCTTGTTC
CGGGCTTGGAGAAACTACTTGACTACACGGCAACTCCATCTGACTTCCCG
TTCGTGTGTAAGGGGTCGGGTGGGACTGAACAGACACCTCATTGGTACAA
AGAACACGGTATCACATTGTTGTGCAGCTCCCAGGCCATCTGGGCCGACC
TCGACAAAAAATTCCTTATTGTGAAGAGGATTTGCCCTGATGGCAAAGGG
GGTCTCCTGTCCAAACAAACAACTAAGGTGGGATACAAGTATTTGATGAT
TGCCACGGGAGTAAGGCCCCGGCGCATTGAGGATAGCGCCAATGGCAACC
TGGCTTACAGAATCCAGGAGTCCTGTTTTTGTTCGCGACACCCAGACCTA
TTGGGATCTCCTCCTGTGCTCTTCAAGTCAGATGAGTATGGCTTCGGGTC
AGTGCACTATCTCCGGGACCTGGGAGACTCCATCAAACTCCTACAGGCCA
TGGGTAGGGTGGAGGCTGATGGACAGGAGACCTGTCGAGATGCAGTGGTA
GTGATTGGTGGTGGGCTGATAGCATGTGAGGTGGCATCAGCCATAGTATC
TCACTACCCTGACATTCCATTGACACTAGTCATTCCAAGGGAGAACCTGC
TGCAGGGGTTAGGCTTCGGTAAAGAGATTGGGTATTTCTATGAAAAGCAG
CTCTCAAGGGCTGGCGTGAAGTTTGCCAAGAGCTATTGTGTTACCCGTTT
ATGGGCCCTGGATGAGGAGGGGAAGTTTCCTACACTTGAACGGGTGCCAC
AGGCACCATTGCTGAAGAAAACACTCCCACGATCATTTGGACCAGCTGAT
CCTAATCTTACCTCCTGCAGAGGTGTGGTTTTGTCTGGCGCACAAAGTGA
GGAACAGGTGTGGCTACCAGCAAGATACATTGTTTTGGGAATCGGCTCCA
TTCCCAACACGGACTTGTTTCACAGTTCCCTTTCCACAGCCCCAGATGGC
AGCCTTATCACAGACTCTGCATTGCGTGTAAGTCATGCCTCCAGAGATGT
CTTTGCAGCTGGTGATGTGGCATCTGTACCTCTGCTGCTGGCTGGTGGGA
GATTAACTCGCTTCGAACACGTTCATGCTGCCCGGGAAATGGCTCTGCAC
TGTGCCAGAGTCATGTTGTACCCTGAGGGACAAGAATCAAAGTTGCCTTA
CAACCCTGTGCCATCCTTCTACTCCAGGTTTTTGGATCTGTCGTGGAAAT
TTTACGGCTTCACAGAGGGAGAGATGGTTGTCCTGGGCATGGAAGCATTT
CCTACATCACGGACATTTGGTGCTTTCTGGCTCAAGGAAGGACAAATTGT
TGGTGCTTTCCTTGAGGAAGACACTTCCTTGGGGGTGGACCATTCTGCTG
CGCTTGAGCTCATGGCAAGGGAGAGACCTCGTGTACTTGATGTTAAACAT
CTGAGCAAGTGCCCCCTGGATCAGCTCATTGCTGATCCACACTGCCTGAG
TCCTCCGGAGCTGGGTGTAGGGGAGTTCCATGCTGATACAGATGAATCCA
GCATTGTTGACGCCTTTCGCAAGTATGCTGTGGCAGGAAATAAGGTTAAG
GCATCAGATCTTGATCAAGTTATGAAGGTCCTTGGTGCAGACTGGGATAA
GGAAGAGTTTGCCGAAGTGCTACGATCGTTGGACCCTTGCGGTTCAGGCA
TGGTTCACTTTGATGCATTCAAGGAGTGGTGGTCTCACTAA
back to top