mRNA_C-tenellus_contig9344.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A7S0Q1V6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V6_9EUKA) HSP 1 Score: 122 bits (305), Expect = 2.770e-29 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 883 GSISSKGNTMATAGVGNEQDFVKELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGAL 1236 GS SSK + MA G+ V++LV + +MVFSK+YCPYCK AK L+K GA F +ELD +G IQ+ LL +TGQ+TVPNVFVGGKSIGGG+ET+ L +SGEL AA AL Sbjct: 2 GSSSSKVDAMAAQDAGS---LVEKLVEEHAVMVFSKSYCPYCKLAKEVLTKEGAKFHAIELDKRDDGNAIQNALLKLTGQKTVPNVFVGGKSIGGGSETKALSQSGELKKKLVAAKAL 116
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: D8LC00_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC00_ECTSI) HSP 1 Score: 117 bits (293), Expect = 8.770e-28 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 940 DFVKELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGA 1233 D V E+V + ++V+SKTYCP+C KAK AL +GA ++++ELD NG+ IQD L ++TGQR+VPNVF+GG SIGGG +T +LQ+SGEL+ A GA Sbjct: 6 DAVNEMVGQHGVVVYSKTYCPFCTKAKKALKDVGAKYELIELDEVDNGSAIQDALQSITGQRSVPNVFIGGTSIGGGDDTVRLQKSGELLTKVTAVGA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A1R3GM95_COCAP (Glutaredoxin n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GM95_COCAP) HSP 1 Score: 117 bits (293), Expect = 9.590e-28 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE+V+ANP++VFSK+YCPYC K L K+ ASFK +ELDNES+G+ IQ L TGQRTVPNVF+GGK IGG T L + G+L+ + AGA+A Sbjct: 7 KEIVSANPVVVFSKSYCPYCVSVKQLLQKLDASFKAIELDNESDGSEIQSALAEWTGQRTVPNVFIGGKHIGGCDTTTALHQEGKLIPLLNQAGAIA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A076KWF9_TOBAC (Gluaredoxin n=3 Tax=Solanaceae TaxID=4070 RepID=A0A076KWF9_TOBAC) HSP 1 Score: 117 bits (293), Expect = 9.880e-28 Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE+V+ANP++VFSKTYCP+C K+ LSK+GASF +ELD E +G+ IQ L TGQRTVPNVF+GGK IGG T L R G+LV + AGALA Sbjct: 7 KEIVSANPVVVFSKTYCPFCVSVKDLLSKLGASFNAVELDTEKDGSEIQAALAEWTGQRTVPNVFIGGKHIGGCDATTALHREGKLVPLLTEAGALA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A7S1B3V4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3V4_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.050e-27 Identity = 55/110 (50.00%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 910 MATAGVGNEQDFVKELVAANPIMVFSKTYCPYCKKAKNALSKIGAS-FKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGAL 1236 M ++ + ++++ + +N ++VFSKTYCP+C KAK +L+ +G + FK +ELD ++G++IQ LL++TGQRTVPNVF+GGKSIGGG +T L++SG+L M +AAGAL Sbjct: 1 MGSSSSKDMSSYIQDTIGSNKVVVFSKTYCPFCTKAKRSLANVGCTNFKSVELDQMADGSSIQSGLLSLTGQRTVPNVFIGGKSIGGGDDTAALEQSGKLKTMLQAAGAL 110
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A6P5ZGL0_DURZI (glutaredoxin-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZGL0_DURZI) HSP 1 Score: 116 bits (290), Expect = 2.480e-27 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE+V+ANP++VFSKT+CP+C K K L ++GASFK +ELDNES+G IQ L TGQRTVPNVF+GGK IGG T + + G+L+ + AGA+A Sbjct: 7 KEIVSANPVVVFSKTHCPFCVKVKQLLQQLGASFKAIELDNESDGVEIQAALAQWTGQRTVPNVFIGGKHIGGCDATTAMHKDGKLIPLLTEAGAVA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A087GTB4_ARAAL (Glutaredoxin domain-containing protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087GTB4_ARAAL) HSP 1 Score: 116 bits (290), Expect = 2.790e-27 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KELV++N ++VFSK+YCPYC + K L ++GA+FK +ELDNES+GA +Q L TGQRTVPNVF+GGK IGG T L R G+LV + AGA+A Sbjct: 7 KELVSSNSVVVFSKSYCPYCVRVKELLQQLGATFKAIELDNESDGAAVQSALGEWTGQRTVPNVFIGGKHIGGCDATTNLHRDGKLVPLLTEAGAVA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A6P3ZZT2_ZIZJJ (glutaredoxin-like n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZZT2_ZIZJJ) HSP 1 Score: 115 bits (289), Expect = 3.410e-27 Identity = 53/97 (54.64%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE+V++NP++VFSKTYCPYC K +++GA+FKV+ELD ES+G+ IQ L +TGQRTVPNVF+GG IGG T+ L + G+L+ + AGA+A Sbjct: 7 KEIVSSNPVVVFSKTYCPYCVTVKQLFTQLGATFKVIELDTESDGSEIQSALAEITGQRTVPNVFIGGNHIGGCDNTKALHKDGKLITLLTEAGAVA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: A0A6P5YNJ8_DURZI (glutaredoxin-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5YNJ8_DURZI) HSP 1 Score: 115 bits (289), Expect = 3.410e-27 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE V+ANP++VFSK+YCPYC K L +IGASFK +ELDNES+GA IQ L TGQRTVPNVF+GG IGG T + + G+L+ + AGA+A Sbjct: 7 KETVSANPVVVFSKSYCPYCVSVKKLLQQIGASFKAIELDNESDGAEIQAALAEWTGQRTVPNVFIGGNHIGGCDTTNAIHKDGKLIPLLTEAGAVA 103
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Match: UPI000CED17C3 (glutaredoxin n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED17C3) HSP 1 Score: 115 bits (289), Expect = 3.410e-27 Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 949 KELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLELDNESNGATIQDTLLAMTGQRTVPNVFVGGKSIGGGTETEQLQRSGELVNMARAAGALA 1239 KE+V++NP+ VFSKTYCP+C K LS++GA+FK +ELD ES+GA IQ L TGQRTVPNVF+GGK IGG T L + G+LV + AGALA Sbjct: 7 KEIVSSNPVAVFSKTYCPFCASVKKLLSELGATFKAVELDTESDGAEIQAALAEWTGQRTVPNVFIGGKHIGGCDATMALHKEGKLVPLLTEAGALA 103 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9344.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9344.1.1 >prot_C-tenellus_contig9344.1.1 ID=prot_C-tenellus_contig9344.1.1|Name=mRNA_C-tenellus_contig9344.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=111bp MATAGVGNEQDFVKELVAANPIMVFSKTYCPYCKKAKNALSKIGASFKVLback to top mRNA from alignment at C-tenellus_contig9344:3126..5966- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9344.1.1 ID=mRNA_C-tenellus_contig9344.1.1|Name=mRNA_C-tenellus_contig9344.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2841bp|location=Sequence derived from alignment at C-tenellus_contig9344:3126..5966- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9344:3126..5966- >mRNA_C-tenellus_contig9344.1.1 ID=mRNA_C-tenellus_contig9344.1.1|Name=mRNA_C-tenellus_contig9344.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=333bp|location=Sequence derived from alignment at C-tenellus_contig9344:3126..5966- (Choristocarpus tenellus KU2346)back to top |