mRNA_C-tenellus_contig9332.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9332.1.1
Unique NamemRNA_C-tenellus_contig9332.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 7.700e-114
Identity = 174/293 (59.39%), Postives = 220/293 (75.09%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEK-TGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADD 876
            VTSWD   ++PQ+ Y+ GRS+++CVSEK TG D    +G AK +MGECRMDI++SE+ Y+G++ SESYG+TWKVRG C DLSN E+F+  NVYGD+  S+IHH+Y+G YS+GHQGGVWTNNK+HDN QYGFDPHDDSD++TI+ NEVYNN NHGIIASKRCN++ I  N V D  G  AAGIFLHRSSD A +  N + N+ DAGIA++ESF  ++Y N     KYG+R+S+G  NNE+Y N+F   S+YG +TYEGSD P   S+GRP  NV   N V D   G+K+ E DD
Sbjct:  546 VTSWDTPNKEPQETYENGRSFLNCVSEKLTGDD---CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDG-GAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDV-SDGRPSGNVLALNLVEDCPIGVKIKEGDD 833          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 5.390e-112
Identity = 163/291 (56.01%), Postives = 212/291 (72.85%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEAD 873
            VTSWD D  +PQ+ Y  GRS++ CVSE    +  C    A  +MGECRMDI+DSEMGY+G+  SE+YG+TWKVRG C DLSN ++FD VNVYGD+  S+IHHMY+G+YSFGHQGGVWTNN +HDN QYGFDPHDDSD++ I+ N+VYNN NHGIIASKRCN++ I +N V+D  G  AAGIFLHRS DD+ + GN + N+ DAGIA++E+ G  ++ N     ++G+R+ +G SNN+++DN F+     G FTY GSD P+    GRP  N F NN +  T  G+K+ E+D
Sbjct:  108 VTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC----AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDG-GADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWV-GGGRPCDNEFYNNTIQATETGVKIKESD 392          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 5.060e-106
Identity = 162/296 (54.73%), Postives = 218/296 (73.65%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEK-TGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTD--SNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            VTSWD   + PQ  Y  GRS+++CVSEK TG  + C  G A+ +MGECRMDI++SE+GY+G++ SESYGLTWKVRG C DLSN ++FD+ NVYG+++ S+IHH Y+G YS+GHQGGVW NN++HDN QYGFDPHDDSD++T             IIASKRCN++ I NN V+D  G  AAGIFLHRSSD A++  N+V ++ DAG+A++ES    +Y N F++ K+G+R+S+G S N +++N FE  S  G +TY+GSD P TD  S+GRP  N+F NN +L+ T+G+K+ E DDT
Sbjct:  183 VTSWDTPNKTPQATYVGGRSFLNCVSEKLTG--EVCV-GQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDG-GPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEP-TDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDT 461          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 8.330e-105
Identity = 167/294 (56.80%), Postives = 206/294 (70.07%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSE-KTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            V SWD     P ++   GRSY+S VSE  T  D+ C +G AK  MGE RMDI +SE+GY+G+  SESYGLTWKVRG C D SN EIFD VNVYG++ +S+IHH+ FG+Y++GHQ G W  NK+HDN  YGFDPHDDSDF+TI DNEVYNNG HGIIASKRCN ++I  N V+    E +AGIFLHRSSDDA++ GN V +  DAG+A++ESF   V  NTF N KYGVR+SVG ++N   +N     SKY  +TY GSD P   S+GR ++NVF  N      + IK+ EAD T
Sbjct:  161 VFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETC-EGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGA-ETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 452          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 4.190e-104
Identity = 163/294 (55.44%), Postives = 206/294 (70.07%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEK-TGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            V SWD     P ++   GRSY+S +SE  T  D+ C +G AK  MGE RMDI  SE+GY+G++ SESYGLTWKVRG C D SN E+FD VNVYG++ +S+IHHM FG+Y++GHQ G W  NK+HDN  YGFDPHDDSDF+TI DNEVYNNG HGIIASKRCN ++I  N V+    E +AGIFLHRSSDDA++ GN V +  DAG+A++ESF   V  NTF N KYGVR SVG ++N   +NT    ++Y  ++Y G+D P   S+GR ++NVF  N      + IK+ EAD T
Sbjct:  157 VFSWDTSTNSPDEDETDGRSYISAISEIITDEDETC-EGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGA-ETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 448          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 6.660e-104
Identity = 164/301 (54.49%), Postives = 211/301 (70.10%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEK-TGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVR---------GLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEAD 873
            VTSWD   +QPQ+ Y+ GRS+++CVSEK TG  + C DG AK DMGECRMDI++SEMGYMG++ SESYGLTWKVR         G C DLSN ++F++ NVYGDI NS+IHHMY+G YS+GHQGGVWTNN++HDN QY            +++N+VYNN NHGIIASKRCN++ I +N V D  G  A GIFLHRSSD+A + GN + N+PDAGIA++ESF   ++ N     ++G+R+S+G   N +YDN F   S +G +TY GSD P   SNGRP  N F NN V ++  G+K   +D
Sbjct:  119 VTSWDTPNKQPQETYEGGRSFLNCVSEKLTG--ETC-DGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDG-GPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDV-SNGRPNGNTFNNNKVTNSAGGVKFKNSD 402          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 4.370e-101
Identity = 154/293 (52.56%), Postives = 203/293 (69.28%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            V +WD     P ++   GRSY+S VSE    D+   +G AK +MGE RMDI +SEM Y+G++G+E+YGLTWKVRG CVD  N E+FD VNVYG+I +S+IHH  FG+Y++GHQ G W  NK+HDN  YGFDPHDDSDF+TI DNEV+NNG HGIIASKRCN ++I  N V+  +   +AGIFLHRSSD+ ++ GN V +  DAG+A++ESF   V  NTF N KYGVR+SVG   N    N    ++++  F+Y G+D P    +GR + NVF+ N+++   + I L EAD T
Sbjct:  128 VFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSG-SAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGT 419          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 310 bits (793), Expect = 1.500e-99
Identity = 155/293 (52.90%), Postives = 197/293 (67.24%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            V +WD    + + +   GRSY+S VSE     K   DG AKK+MGE RMDI DSEM Y+G++GSESYGLTWKVRGLC DLSNLE+FD+VNVYG+I +S+IHH YFG+Y++GH+ G W  NK+H N +YGFDPHDDSDF+TI DNEVYNNGNHGIIASKRCN              + + GIFLHRSSDDA++  N V +  DAG+A+ME+F   V  N F + KYG+R+SVG ++N    N    +SKY  +TY+GSD P+   +GR +             + +KL  AD T
Sbjct:  154 VFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAK-SVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGT 445          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 6.980e-99
Identity = 161/295 (54.58%), Postives = 207/295 (70.17%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLC-VDLS-----NLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLP-FTDSNGRPKHNVFINNDVLDTTQGIKLG 864
            VTSWD D  Q ++    GRS+++CV++         DG + ++ GECRMDI+ S MG MGW+ +ESYGLTWKVRG C +D       N EIF+  NVYGDI+NSEI+ MY+G YS+GHQGGVW +N + DN+QYGFDPHDDSD +TIS+N VY NGNHGIIASKRCN++ I NN V+D  GE A GIFLHRSSD A +  N+V N+ DAG+A+MES+   +Y N+FTN +YG+R+S+G   N I +N F   ++YG +TY GSD P   +SNGRP  NVF  N +   T G  +G
Sbjct:  286 VTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDG-GEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTI--ETDGDNIG 577          
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 6.760e-98
Identity = 152/293 (51.88%), Postives = 195/293 (66.55%), Query Frame = 1
Query:    1 VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMDILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEIHHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNGNHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENVPDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYGFFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT 879
            V +WD  +  P ++ + GRSYVS VSE    D    +G AK +MGE RMDI DSEMGY+G++GSESYGLTWKVRG CVD SN ++F+ VNVYG+I +S+IHH  FG+Y++GHQ G W  NK+HDN  YGFDPHDDSDF+TI DNEVY+NG HGIIASKRCN ++I  N V+      +AGIFLHR                DAG+A+MESF   V  N F N KYG+R SVG   N  ++N    +++Y  ++Y GSD P    +GR + NVF  N+++   + IKL +AD T
Sbjct:  154 VFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATS-SAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGT 445          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9332.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI7.700e-11459.39Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI5.390e-11256.01Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI5.060e-10654.73Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FXE4_ECTSI8.330e-10556.80Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI4.190e-10455.44Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE6.660e-10454.49MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ8_9PHAE4.370e-10152.56Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA1.500e-9952.90Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7G8D9_ECTSI6.980e-9954.58Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
Q7XAJ7_9PHAE6.760e-9851.88Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9332contigC-tenellus_contig9332:566..2317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LC73
PFAMsWSC
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.26e-114
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size879
COG categoryU
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9332.1.1prot_C-tenellus_contig9332.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9332 566..2317 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790170.8901894-CDS-C-tenellus_contig9332:565..6991680790170.8901894-CDS-C-tenellus_contig9332:565..699Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 566..699 -
1680790170.9100068-CDS-C-tenellus_contig9332:854..10191680790170.9100068-CDS-C-tenellus_contig9332:854..1019Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 855..1019 -
1680790170.925536-CDS-C-tenellus_contig9332:1143..13531680790170.925536-CDS-C-tenellus_contig9332:1143..1353Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 1144..1353 -
1680790170.9345343-CDS-C-tenellus_contig9332:1493..15531680790170.9345343-CDS-C-tenellus_contig9332:1493..1553Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 1494..1553 -
1680790170.949975-CDS-C-tenellus_contig9332:1678..17721680790170.949975-CDS-C-tenellus_contig9332:1678..1772Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 1679..1772 -
1680790170.9636862-CDS-C-tenellus_contig9332:1962..20311680790170.9636862-CDS-C-tenellus_contig9332:1962..2031Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 1963..2031 -
1680790170.9749737-CDS-C-tenellus_contig9332:2170..23171680790170.9749737-CDS-C-tenellus_contig9332:2170..2317Choristocarpus tenellus KU2346CDSC-tenellus_contig9332 2171..2317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9332.1.1

>prot_C-tenellus_contig9332.1.1 ID=prot_C-tenellus_contig9332.1.1|Name=mRNA_C-tenellus_contig9332.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=293bp
VTSWDPDVEQPQKNYDMGRSYVSCVSEKTGYDKGCTDGFAKKDMGECRMD
ILDSEMGYMGWYGSESYGLTWKVRGLCVDLSNLEIFDSVNVYGDIMNSEI
HHMYFGIYSFGHQGGVWTNNKVHDNVQYGFDPHDDSDFITISDNEVYNNG
NHGIIASKRCNDLTITNNHVHDHTGEIAAGIFLHRSSDDAVISGNIVENV
PDAGIAIMESFGLRVYRNTFTNTKYGVRISVGGSNNEIYDNTFEAASKYG
FFTYEGSDLPFTDSNGRPKHNVFINNDVLDTTQGIKLGEADDT
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mRNA from alignment at C-tenellus_contig9332:566..2317-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9332.1.1 ID=mRNA_C-tenellus_contig9332.1.1|Name=mRNA_C-tenellus_contig9332.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1752bp|location=Sequence derived from alignment at C-tenellus_contig9332:566..2317- (Choristocarpus tenellus KU2346)
GTAACATCTTGGGATCCGGATGTTGAACAGCCTCAAAAAAACTATGATAT GGGACGTTCCTACGTCAGCTGCGTCAGTGAAAAGACTGGGTATGACAAGG GATGCACTGATGGTTTTGCCAAGAAAGACATGGGTGAATGCCGCATGGTG AGTGGACTTCCCCTCAACTCATTAGTTGTGTTCGAAATGTGCAATGATTA TCAGAGCATTGCACTCCAGTATTTCTTTGGTTTATGCAGAAAAAAAAGTC TCAGCACTCAACCTGACAAGTCCCTACTTCACACAGGACATCCTGGACTC GGAGATGGGCTACATGGGATGGTATGGCTCTGAATCTTATGGCCTTACCT GGAAGGTATGTAATGATTGACTCAAGCATATGTGACCGATCTGATTTATT AGTATCATAATCTCCCACATAAGTTTTGTGTCAAATTTAGTTTTTAAAGA CGATTTTACCATTCATTGAGTGGTCTTTGCTGCTTCAAATATGTCAGTTT AACTAAAGGCCTTTCATGTGCTCTTGAACCAATGATTCTTTTCAGGTTCG AGGATTGTGTGTGGACCTGAGCAACCTCGAAATTTTCGACAGTGTCAACG TGTATGGTGACATCATGAACTCAGAAATCCACCACATGTGTAAGTAAAAG TGGATCACGACTGTAATGTGTTCATGTGAAGAGTTGAATAGGTCATAAAT ATGTGTCCGAATCAAGGTGATAATTATGCAAAGATGACTGATGATTTCTT TTACCCCTGAACAGACTTTGGCATTTACTCTTTTGGACACCAGGGTGGTG TTTGGACCAACAACAAAGTTCATGGTGAGTCACACTCATGATGAATGTAC AAGTATGGGTTTTACCTTGCCCTAGTTATAGATAAGGCACTAAGCTGTTA CATGGTACTGTTTGTCTTGATGTCCTGTGATACCCTCTAACTCACATTTT ACACTGTATACCAGACAATGTGCAGTATGGATTTGACCCTCACGACGACA GCGATTTCATCACCATCTCCGACAATGAGGTATACAACAATGGGAACCAT GGTATCATCGCCTCAAAGCGTTGCAATGATCTCACTATCACCAACAACCA CGTCCATGACCACACTGGAGAAATCGCTGCTGGTATCTTCCTACACCGCA GCAGTGATGATGCTGTTATCAGTGGTGAGTCTTCTGCCTCGTATCAATGA TGTCATGTGGGTTGAAACAATATTCTTTCCATGTGATTTTATCACCTGCT ACCGTTTACAAGTTTAATGTTTTGTTTTTGTTTGCACATGGCATGCAGGA AACATTGTAGAGAACGTGCCTGATGCTGGCATTGCCATCATGGAGTCCTT TGGGCTTAGAGTATATAGAAATACCTTCACCAACACGAAGTATGGTGTTC GCATCAGTGTGGGTGGGTCAAACAATGAGATCTACGACAACACCTTTGAG GCAGCATCTAAGTGTGAGTGATGTTCGTACTTGTCAGACTATAAGTACCA CGTAGATTCCCCCCCTTTTAGATTATTCTCTCTAAAACTATCATTTTGTG TGCAGAGTGAACAGCTTTCATAACATAAATAATTCTGACATTGTCAAGAA TATTTTTGAATGATCCAGATGGGTTCTTCACCTACGAGGGATCTGATCTT CCGTTCACAGACAGCAATGGACGCCCAAAACACAACGTGTTCATAAACAA TGATGTTTTGGACACTACCCAGGGTATTAAGCTTGGAGAAGCTGATGACA CC
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Coding sequence (CDS) from alignment at C-tenellus_contig9332:566..2317-

>mRNA_C-tenellus_contig9332.1.1 ID=mRNA_C-tenellus_contig9332.1.1|Name=mRNA_C-tenellus_contig9332.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=879bp|location=Sequence derived from alignment at C-tenellus_contig9332:566..2317- (Choristocarpus tenellus KU2346)
GTAACATCTTGGGATCCGGATGTTGAACAGCCTCAAAAAAACTATGATAT
GGGACGTTCCTACGTCAGCTGCGTCAGTGAAAAGACTGGGTATGACAAGG
GATGCACTGATGGTTTTGCCAAGAAAGACATGGGTGAATGCCGCATGGAC
ATCCTGGACTCGGAGATGGGCTACATGGGATGGTATGGCTCTGAATCTTA
TGGCCTTACCTGGAAGGTTCGAGGATTGTGTGTGGACCTGAGCAACCTCG
AAATTTTCGACAGTGTCAACGTGTATGGTGACATCATGAACTCAGAAATC
CACCACATGTACTTTGGCATTTACTCTTTTGGACACCAGGGTGGTGTTTG
GACCAACAACAAAGTTCATGACAATGTGCAGTATGGATTTGACCCTCACG
ACGACAGCGATTTCATCACCATCTCCGACAATGAGGTATACAACAATGGG
AACCATGGTATCATCGCCTCAAAGCGTTGCAATGATCTCACTATCACCAA
CAACCACGTCCATGACCACACTGGAGAAATCGCTGCTGGTATCTTCCTAC
ACCGCAGCAGTGATGATGCTGTTATCAGTGGAAACATTGTAGAGAACGTG
CCTGATGCTGGCATTGCCATCATGGAGTCCTTTGGGCTTAGAGTATATAG
AAATACCTTCACCAACACGAAGTATGGTGTTCGCATCAGTGTGGGTGGGT
CAAACAATGAGATCTACGACAACACCTTTGAGGCAGCATCTAAGTATGGG
TTCTTCACCTACGAGGGATCTGATCTTCCGTTCACAGACAGCAATGGACG
CCCAAAACACAACGTGTTCATAAACAATGATGTTTTGGACACTACCCAGG
GTATTAAGCTTGGAGAAGCTGATGACACC
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