mRNA_C-tenellus_contig9329.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9329.1.1
Unique NamemRNA_C-tenellus_contig9329.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: D8LFH3_ECTSI (Glucosylceramidase, family GH30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH3_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.700e-91
Identity = 135/194 (69.59%), Postives = 159/194 (81.96%), Query Frame = 1 
Query:  262 GTVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPTGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVPRDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEV 843
            GTVVV++  KLQEI+GFGGAFTDAATIN  KLP  VQ +V+DAYFGP GIEYS+GRIP+ SCDFSVEQY+FD+ PGDYNL  FD+ +  +T QRIPM+  A+ R E+L LFTSPWSPPAWMK P+DG QSMI+SA PQGLL DP V  AWAL+FS+FISAY + G+DLWGLT+QNE ENPGPWEACV+  S + 
Sbjct:  135 GTVVVESDDKLQEIIGFGGAFTDAATINFFKLPEDVQEQVLDAYFGPNGIEYSVGRIPMGSCDFSVEQYSFDEVPGDYNLTHFDDGVEKDTAQRIPMLLSALARREDLKLFTSPWSPPAWMKEPKDGVQSMIESALPQGLLADPGVHAAWALFFSRFISAYKEQGVDLWGLTIQNESENPGPWEACVYTPSSQA 328
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BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A835Z8L7_9STRA (Glucosylceramidase, family GH30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L7_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.100e-89
Identity = 135/197 (68.53%), Postives = 159/197 (80.71%), Query Frame = 1 
Query:  259 RGTVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPTGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVP---RDG--EQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNAS 834
            RG + VD++   QEI+GFG AFTD+ATIN  KLP   Q  V+DAYFGP GI Y+IGRIP+ SCDFSVEQYN+DD PGDY++  FDNNI  +  QR+PMIKEA+ R+ NL LF SPWSPPAWMK P   +DG   QSMI+S++PQGLLDDPRVK AWALYFSKFISAY   G+D+WG+T+QNEPENPGPWEACV+NAS
Sbjct:   29 RGRIDVDSTASYQEIVGFGAAFTDSATINFYKLPKEAQDFVIDAYFGPDGIGYTIGRIPMGSCDFSVEQYNYDDVPGDYSMEHFDNNIEYDQKQRVPMIKEALKRQPNLKLFMSPWSPPAWMKYPTKDKDGVYRQSMIESSYPQGLLDDPRVKHAWALYFSKFISAYKALGVDMWGVTIQNEPENPGPWEACVYNAS 225
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BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A7S2V2A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2A4_9STRA)

HSP 1 Score: 220 bits (560), Expect = 4.480e-63
Identity = 101/197 (51.27%), Postives = 134/197 (68.02%), Query Frame = 1 
Query:  259 RGTVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPTGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREEN--LNLFTSPWSPPAWMKVPRDGEQSMIK--SAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASF 837
            +G V VDTS K QE++GFGGAFT+++  N   LP  +Q KV++AYFG  GI YS+GR+ ++SCDFS+  YNFDD   D+ L  FD+N+T +    IP IK A  + +   + +F SPWSPP WMKVP D    M    SAWP GL +DPR   +WALYFSK+++AY  HGID+WG+T+QNEP    PW+ACV+   +
Sbjct:  117 QGFVEVDTSQKFQEVMGFGGAFTESSAFNWAMLPKKIQEKVLEAYFGEDGIGYSVGRVHINSCDFSMASYNFDDVEDDFELEHFDSNVTHDAALLIPFIKAANAKNKYGPMKIFASPWSPPEWMKVPVDKNDKMTMKGSAWPVGLKNDPRYHRSWALYFSKWLTAYKNHGIDIWGVTIQNEPLFAAPWDACVWTPEY 313
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: W4G5S9_9STRA (Ricin B-type lectin domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5S9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.760e-62
Identity = 107/196 (54.59%), Postives = 133/196 (67.86%), Query Frame = 1 
Query:  265 TVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGP-TGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVPRD-GEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEVS 846
            T+ +D S   QEILGFGGAFT+A+ +N  KLP + Q +V+  YF   TG  YS GR+P++SCDFSV  Y+FDD  GD +L  FD N+T +T   IP++  A+ R  +L LF SPWSPPAWMK+P D G+ SM  SA P G+  +P  + AWALYFSKFISAY  HGI  WGLT QNEP  P PWEAC + A  E +
Sbjct:  120 TIYIDDSKVFQEILGFGGAFTEASALNFKKLPRAKQEEVLRLYFDEKTGAAYSFGRVPMNSCDFSVGSYSFDDVVGDVSLAHFDTNVTKDTESIIPLLHRALQRRPDLKLFLSPWSPPAWMKLPNDKGKYSMTGSATPLGI--NPIYQAAWALYFSKFISAYKHHGIAFWGLTPQNEPMFPAPWEACFWEAHSEAT 313
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BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A7R9UG94_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG94_9STRA)

HSP 1 Score: 211 bits (537), Expect = 9.230e-61
Identity = 104/209 (49.76%), Postives = 140/209 (66.99%), Query Frame = 1 
Query:  238 DSCPLDGRGTVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPTGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEA-IIREENLNLFTSPWSPPAWMKVP------RDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEV 843
            D  PL  R  + +D S K Q I+GFGGAFT+AA+I   KL P  +  V+  YF   G+ Y++GR+ ++SCDFS E Y+FDD  GD++L  FD+N++ +  + IP I  A  +    L +F SPWSPPAWMKVP       +  QSM+ SA P+GLL DP+V++AWA YF +FI+AY   GI++WG+TVQNEPE   PWEAC +NAS E+
Sbjct:   80 DPAPLALRA-IEIDPSIKFQTIVGFGGAFTEAASIQFEKLAPEAKLVVLALYFTNAGLGYTLGRVHMNSCDFSPESYSFDDVHGDFDLSHFDDNVSHDQQKMIPFILAAQAVSLNKLQVFASPWSPPAWMKVPVTPKGSSEAVQSMLNSADPRGLLPDPQVQQAWANYFVRFIAAYKASGINMWGVTVQNEPEFAAPWEACKYNASAEM 287
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A6G0WE16_9STRA (Ricin B-type lectin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE16_9STRA)

HSP 1 Score: 213 bits (542), Expect = 9.970e-61
Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = 1 
Query:  268 VVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGP-TGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVPRD-GEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEVS 846
            + VD     QE+LGFGGAFT+A+ +NL KLP   Q +++  YF   TG  Y+IGR+P+ S D+S + Y+FD+  GD  L KFD N+T +T   IP+I+ A+    ++ LF SPWSPPAWMK+P   GE SM  SAWP GL  + + +EAWALYFSKFI+AY  HG++ WGLT QNEP    PW+AC++ A FE S
Sbjct:  119 IYVDDKQVFQEVLGFGGAFTEASALNLLKLPLDKQEEILHLYFDKKTGAGYTIGRVPMGSSDYSPKSYSFDEVVGDVKLEKFDTNVTHDTETMIPLIRRALKLRPDIRLFLSPWSPPAWMKLPNSHGEYSMTGSAWPNGL--NSKYQEAWALYFSKFITAYKNHGVNFWGLTPQNEPMFAAPWDACLYTADFEAS 311
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BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A024TDU2_9STRA (Ricin B-type lectin domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDU2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.160e-59
Identity = 104/196 (53.06%), Postives = 129/196 (65.82%), Query Frame = 1 
Query:  265 TVVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGP-TGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVPRD-GEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEVS 846
            T+ +D S   QEILGFGGAFT+A+ +N  KLP   Q +V+  YF   TG  YS GR+P++SCDFSV  Y+FDD  GD +L  FD N+T +    IP ++ A+    ++ LF SPWSPPAWMK P   GE SM  SA P G+  +P  + AWALYFSKFISAY  HGI+ WGLT QNEP  P PWEAC + A  E +
Sbjct:  121 TIHIDDSKVFQEILGFGGAFTEASALNFKKLPRVKQEEVLRLYFDEKTGAAYSFGRVPMNSCDFSVASYSFDDVVGDVSLEHFDTNVTHDAEAIIPFLRRALKLRPDIKLFLSPWSPPAWMKAPNSKGEFSMTGSATPLGI--NPTYQAAWALYFSKFISAYKGHGINFWGLTPQNEPMFPAPWEACFYEAKSEAT 314
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: A0A6G0WG32_9STRA (Ricin B-type lectin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG32_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.280e-58
Identity = 98/201 (48.76%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:  259 RGTVV-VDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGP---TGIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVP-RDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEVS 846
            RG+ + +D + + QEILGFGGAFT+AA +   +LP + Q  +++ YFG     G  YS GR+P++SCDFS   Y+FD+   D  L  FD  +T +    IP IK+A+    +L LF SPWSPPAWMK P R G+Q+M+ SA P GL   P  +E WALYFSKF+SAY  HGI  WG+T QNEP+ P PWEAC+++ +++ +
Sbjct:   95 RGSYISIDDTVEYQEILGFGGAFTEAAALQFQRLPLAKQQALLELYFGHQGNNGAAYSFGRVPMNSCDFSPASYSFDEVANDTTLEHFDVGVTHDAVAMIPFIKQALTLRPDLKLFLSPWSPPAWMKYPDRQGKQTMLGSAEPYGL--PPEFRETWALYFSKFVSAYKSHGIPFWGVTPQNEPQQPAPWEACLYDDAYQAA 293
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: K3X2V2_GLOUD (Ricin B-type lectin domain-containing protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2V2_GLOUD)

HSP 1 Score: 207 bits (526), Expect = 2.340e-58
Identity = 103/194 (53.09%), Postives = 126/194 (64.95%), Query Frame = 1 
Query:  268 VVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPT-GIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMK-VPRDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEV 843
            + VD STK QE+LGFGGAFT+AA +   KL P  Q +V+  YF    G  Y  GR+P+ SCDFSV  YNF+D   D  +  FDNN+  +T   IP I+ A+ +   L +  +PWSPPAWMK   +D   SM+ S  P GL DD R  EAWALYFSKFISAY  +GI+ WGLT QNEPE   PWEAC +NAS+E 
Sbjct:  123 IAVDVSTKFQEMLGFGGAFTEAAALQFAKLSPEKQEEVLKLYFDKEDGAAYEFGRVPMGSCDFSVGSYNFNDVANDITMSHFDNNVEHDTKLLIPFIQRALEKNPKLKMLLAPWSPPAWMKRESKDYMPSMLGSVTPVGLRDDAR--EAWALYFSKFISAYKNYGINFWGLTPQNEPEFAAPWEACGYNASYEA 314
[Close]
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Match: W4G5G5_9STRA (Ricin B-type lectin domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5G5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.340e-57
Identity = 98/197 (49.75%), Postives = 133/197 (67.51%), Query Frame = 1 
Query:  268 VVVDTSTKLQEILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPT---GIEYSIGRIPLDSCDFSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTSPWSPPAWMKVP-RDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQHGIDLWGLTVQNEPENPGPWEACVFNASFEVS 846
            ++VDTST  Q I+GFGGAFT+A+ +   +LP   Q  V+  YF P    G  YS+GR+P++SCDFS   Y+FDD  GD  L  FD ++T +T   IP+I+ A+    ++ LF SPWSPPAWMK+P   G+  M+ SA P GL  +P  + +WALYFSKFISAY  +GI+ WGLT QNEP+ P PWEAC+++ S + +
Sbjct:  149 ILVDTSTTFQHIVGFGGAFTEASALQFQRLPRHKQDDVLRLYFSPAADGGAAYSVGRVPMNSCDFSPSSYSFDDVDGDTLLEHFDMSVTHDTDAMIPLIQRALSLNPDMKLFLSPWSPPAWMKMPDASGKLDMLGSAQPYGL--NPAFQSSWALYFSKFISAYKGYGINFWGLTPQNEPQQPAPWEACLYDDSTQAA 343
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9329.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFH3_ECTSI1.700e-9169.59Glucosylceramidase, family GH30 n=1 Tax=Ectocarpus... [more]
A0A835Z8L7_9STRA1.100e-8968.53Glucosylceramidase, family GH30 n=1 Tax=Tribonema ... [more]
A0A7S2V2A4_9STRA4.480e-6351.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W4G5S9_9STRA2.760e-6254.59Ricin B-type lectin domain-containing protein n=9 ... [more]
A0A7R9UG94_9STRA9.230e-6149.76Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A6G0WE16_9STRA9.970e-6151.79Ricin B-type lectin domain-containing protein n=1 ... [more]
A0A024TDU2_9STRA2.160e-5953.06Ricin B-type lectin domain-containing protein n=2 ... [more]
A0A6G0WG32_9STRA1.280e-5848.76Ricin B-type lectin domain-containing protein n=1 ... [more]
K3X2V2_GLOUD2.340e-5853.09Ricin B-type lectin domain-containing protein n=2 ... [more]
W4G5G5_9STRA1.340e-5749.75Ricin B-type lectin domain-containing protein n=10... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9329contigC-tenellus_contig9329:929..5844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LFH3
PFAMsGlyco_hydro_30,Glyco_hydro_30C,Ricin_B_lectin
Model size849
Max annot lvl2759|Eukaryota
KEGG rclassRC00059,RC00451
KEGG koko:K01201
KEGG ReactionR01498
KEGG Pathwayko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003008,GO:0003674,GO:0003824,GO:0004348,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006677,GO:0006678,GO:0006680,GO:0006687,GO:0006807,GO:0006950,GO:0006986,GO:0007275,GO:0007568,GO:0007610,GO:0007611,GO:0007613,GO:0007626,GO:0008150,GO:0008152,GO:0008340,GO:0008344,GO:0009056,GO:0009987,GO:0010033,GO:0010259,GO:0016042,GO:0016787,GO:0016798,GO:0019377,GO:0019725,GO:0030149,GO:0030534,GO:0032501,GO:0032502,GO:0033554,GO:0034620,GO:0034641,GO:0035966,GO:0035967,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046466,GO:0046477,GO:0046479,GO:0046514,GO:0048856,GO:0050877,GO:0050890,GO:0050896,GO:0051716,GO:0060249,GO:0065007,GO:0065008,GO:0070050,GO:0070887,GO:0071310,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509
Exons5
Evalue2.78e-92
EggNOG OGsCOG5520@1|root,KOG2566@2759|Eukaryota
EC3.2.1.45
Descriptionglucosylceramidase activity
Cds size849
COG categoryM
CAZyGH30
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790170.7573636-CDS-C-tenellus_contig9329:928..10241680790170.7573636-CDS-C-tenellus_contig9329:928..1024Choristocarpus tenellus KU2346CDSC-tenellus_contig9329 929..1024 -
1680790170.7721536-CDS-C-tenellus_contig9329:2084..22101680790170.7721536-CDS-C-tenellus_contig9329:2084..2210Choristocarpus tenellus KU2346CDSC-tenellus_contig9329 2085..2210 -
1680790170.7876308-CDS-C-tenellus_contig9329:3943..40271680790170.7876308-CDS-C-tenellus_contig9329:3943..4027Choristocarpus tenellus KU2346CDSC-tenellus_contig9329 3944..4027 -
1680790170.797513-CDS-C-tenellus_contig9329:4557..47221680790170.797513-CDS-C-tenellus_contig9329:4557..4722Choristocarpus tenellus KU2346CDSC-tenellus_contig9329 4558..4722 -
1680790170.8074174-CDS-C-tenellus_contig9329:5466..58441680790170.8074174-CDS-C-tenellus_contig9329:5466..5844Choristocarpus tenellus KU2346CDSC-tenellus_contig9329 5467..5844 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9329.1.1prot_C-tenellus_contig9329.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9329 929..5844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9329.1.1

>prot_C-tenellus_contig9329.1.1 ID=prot_C-tenellus_contig9329.1.1|Name=mRNA_C-tenellus_contig9329.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=283bp
EFSHHEISVTVFETSKYGGALLTESVPSVKKDCRKSSHASSDSSSDDSSN
GSSDDSSNGSSEDSSNGSSDESSDDSQDMDSCPLDGRGTVVVDTSTKLQE
ILGFGGAFTDAATINLNKLPPSVQTKVMDAYFGPTGIEYSIGRIPLDSCD
FSVEQYNFDDHPGDYNLLKFDNNITMETYQRIPMIKEAIIREENLNLFTS
PWSPPAWMKVPRDGEQSMIKSAWPQGLLDDPRVKEAWALYFSKFISAYSQ
HGIDLWGLTVQNEPENPGPWEACVFNASFEVS*
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mRNA from alignment at C-tenellus_contig9329:929..5844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9329.1.1 ID=mRNA_C-tenellus_contig9329.1.1|Name=mRNA_C-tenellus_contig9329.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4916bp|location=Sequence derived from alignment at C-tenellus_contig9329:929..5844- (Choristocarpus tenellus KU2346)
GAATTCAGTCATCACGAAATTTCTGTGACAGTATTCGAGACCTCCAAGTA
CGGGGGGGCACTGTTGACAGAATCAGTGCCGTCAGTCAAAAAAGATTGTC
GCAAGTCCTCCCATGCATCATCGGATTCGTCCTCCGACGATTCCTCCAAT
GGATCCTCCGACGATTCCTCTAATGGATCCTCCGAAGATTCCTCCAATGG
ATCCTCGGATGAATCCTCGGATGACTCCCAAGACATGGATTCCTGCCCAC
TGGATGGTCGTGGAACTGTAGTAGTTGACACCAGCACCAAGCTGCAGGAG
ATCCTTGGCTTTGGGGGGGCATTCACCGATGCTGCCACAATCAATCTAAA
CAAGCTCCCTCCAAGTGTACAGACCAAAGTGAGAAAATATGGTATTAAAA
TTTTCGCGAGCTATAGTTTCCAAGTTTATTCAGCTATTGGTTTTATGCAG
GTGGTTGAGTCTCTCATCAGAACCCGACTCAAGTCGCCGTTCGGTCACAA
ACCAAACCTGTTGGTCACACCTTCAAGCAACCTTCAATTACGGTCTGCTT
GGGAAATATAGTGCTTGAGCCGGACATGAAAGTAACTGAAGTACTGTCAG
GTAGTGATACAAATGAAATCCGGTCTGTACTTCACATTTTTGGTGTAGGA
CTTGACTTCTGCCCTAACCTCCTAGTCAAGGAATAGCTCAGGTCTGAGTT
CTTTGCGTGGGTATATCAGGTTCAACCATGACTCTGGTCTAGAAATGGCT
AGCACAGAGTTGTCCGGATCTGTTTCTGTGCCAGTGGCAGGTATAGCCTA
AGGTTTGAGTCTCAGTTCACAAGTTTATGCAGCACTTTGAGCGAAGTGCT
GATTGATTCTGCCTGAAACTGCCAGGGACAACCCTCTCCCCATTTCTTGA
AGAGATGAGCCCACTGTACTACAATAGGCAGAAATCCAAAGTTGAGTACA
CAGAAGAACTAACCCCATCAATGCTTCCAACTTCTATTCTGCTCTCTCCA
AAGGCTGGACCATCCAATACCAAGAACTAACCTGCATAGTTGCTACATGA
AATGTTGATTGTAGTTTTGCAGGTCACTCTGCGAAGGGCCTGACTTTTAC
CTTTCCTGTTTCCTCTCTAAAGGTGATGGATGCCTACTTTGGGCCTACTG
GAATAGAGTACTCAATTGGGCGTATCCCTTTGGACAGCTGTGATTTCAGC
GTAGAGCAGTACAACTTTGATGATCATCCAGGGGACTACAACCTCTTGAA
GTTTGACAACAACATAACAATGGAAACCTACCAAAGGGTGAGTAAGATGC
CTGTAGCGGAGAGGCGTTTTGTTGGAAATATGCCAATTTGAGCGTTGTCA
ACGGGAACAAGGTCGGCACAGCTGGTGTAGGGGGTGGGGCTGTAGGTTTG
TGCTTATGAAGCACTTTGACTTTGATATATATACCACAACACATTTAGTG
TCGGTATTGCATGTGTCGAATTGCATCATAGTAAAAGCTTTTTTTTGTGC
CCCAGCTTTTTTTTCTGTATCCTTGATATTTTTCTTTTCTCATTTATGGA
GCTCTTAGAACAGTGATACTGATTCCGTATGAAAGGGTTGGAAACACTGG
CAATATCTGAGGAGAGAGATGCTATCCCAAAGTCCCTTGAACAGTCACAT
AAACCCTACATGATTAGCACACTACAGCCCTCACCTATGCCTGATCTGTG
TCGGGGCCTGCCCCTCACACCTATGATACTCTCTCATCTCACCAAGCTCC
CATCCCCTCATTTGTTCAATTACATCTGCTCACTCACCTATTGGGACAAA
CACCTCTCTTGGAATAGATACCAATGATCAAAGAGGCCATCATCCGTGAA
GAGAATCTCAACCTCTTCACCTCGCCCTGGAGCCCACCAGCTTGGATGAA
GGTGTGTGTCATTTCTTGTGTTCAATATGCATCAATGCCCTGTTGTGACC
ATTAATCGCTGGAGTGATTCCAGTGCGTATTCTGTAGAGAGGCTAGTATT
TTATCTTTTTTATTTGGTCTCAATCCATTTATTTTATTTTTTTACCAGGT
ATTGGTATGAGGAGGTTTTATTGTTAGTGCAGGACTTGAGGTCGACAGCA
CTCAGTCCTGATGGCAGGCAAAATAACAGATAACCCTTGTGTGAATATTT
GAACTCATCTGAATTGCGTGTCAAGATATTGATGAGGTGCCTCTCTATAT
ATACCAACACAGCAGTACAGCCCCTAGTAAGTGGTACAGAGGTATCTCAA
TATCTTGAAAAGGCCAGAGACCAGCCATCACCCCACCAGTCGCATGTGCT
CTCTCGAGCAGTCATCTCAATCTCCGTGTTTCCCTTAAGAGTCCAATACC
TGGTTCTTCAGTGAGTTTCTACTTTGGGTCTCCCAATGTAGGGAGTCAAG
AAGCCAGACCACCTGGGATTTGAAGCTGTGGCTTCATATTTTCTTTTCTT
TTTTTTGGGGGGGGGGGTGTTTGTAATGCAGATGTGTTGTGCGAAAGAAT
CGTTTAGCGCAATGAAAAGGTCGTTTGATATCAGAACATTTTATCGATGT
GCGTACCACACCAGTGCGGTCTGTTAGTTTCATAGGTGTGTGAGAGCCAT
ATTGATAATGCTCTTTGGGTAGTGCGGGGTCTAGACCTGTTTTTGAATCT
TCGAACATTGATGGTCTTGGATTTGGGTCATGTCGGAGCTCTTGTTGCAA
TCCAGTTTGTTTTTTGGACTGCTGTATCACCTAGGGGTCTGGAGGACACT
TTTAAGGGATGAGGGTTTTGTATTTTGATTGCGTGCGCCCTTGTGCGTGT
ACACTTTTTTCGGGGGGGGGTTGCGAGTGCACGCCTTCCAAATGAAAAAT
TTGCAAAAGGATTGTCATTCACAGTGACAATCATCTGGAAAAATCAGAAT
TGTCACAGAAGATGCCTCGGCACATTCCTTCCCGGCCCCTGATGTAGATC
TCTTGTAGGTACAACCAAGTGAGTGCCATCATATTATGTTTCCTTTTTTT
CTCTCGGGGTTGCACTGGCTCTTTCGTTCTGCCAATTAAAGTTCAGGACC
AGAACTCTCTCATCCGTTTTGATTGGACGGTCACCAACTTTAAGACAATG
AGTGGCCTGGCGTTGTTGCCTTTGTTTATTTTTTATGTACAGCTGGAGTT
GAAGATTCGGAGGCGGAGCATTTTTGTTGTTTTTTTTAGGGTTAGGGTCA
TCAGGTCATCAGCTTTGTATTCCCCACAGATTGTTGTTGGCAAGAACGGG
AAGGATGTGGTGGTTGTACGAAGTGTCCCTTGTTGTATTTTTTCAGGTGT
GCAATAGCTTGGCTCTTCACATTGTACCCATTTCAGAGAGGACGAGGGGA
GATGCAAACGCCTGCATCATTTCAAAACTCTTCTAAGACAAGGTTGATCT
ATGTGCTTCATATGTTCCTGTCCACCTCCATTGCAAATTTTAATTTTCTC
GTTTGAGTTGAAAGGGGTTTAGAGTTTCCCATGATAGCGTTATTCGTGGT
ATTGTAATGTACAACTTCTCGCCCGCTTACCCCTCCACCCCCGCCCACGC
CCCCCCACTTCCTTCTCCTCCGTGACTCCTCTGATGTGGTTTGTGAAACA
ACACATCCTTAACGGTTTCTAAACTTTTTGAAAGGTGCCAAGGGATGGGG
AGCAGAGCATGATCAAGAGTGCATGGCCCCAAGGGCTGCTGGATGACCCA
CGGGTGAAGGAGGCCTGGGCACTGTACTTCAGCAAGTTCATCAGTGCTTA
CAGTCAACATGTATGAGGAGGGGAAGGAGAAGTGGGAAGGCGATATTCGA
GATTTTGAGTGTGATGAGTATGGTACATTCGCTATGAGGGAGTGGGTTGG
GTGAACTAGGATAGTGTGGTTGAGGAATCCTTCCTATTCAGATTAACCAG
GTAGGATTTCGTGGGGATAGGGTGGGGGATCCTCTGGAAATGTAACTGTG
TGAGCATGCCATGAATGCATTTGGAAGCTCGCAGGACCCTCCCCAACCTT
CCTTCACTCCCCTTTGTATGTGTTGTGCCAAGTCCTTTACGATGCTGTCC
TTTGGACAAGAGAGTATAGTGGTAAATGCTTGAGATGATCAAGGTCAAAG
GGGTCGTAGTATAACAAGATATATATCAAGGTCAAAGGGGTCGTAGTATG
CCATAATGAGAATGCTTAGTACCCCCTGCCTTTTTGTCTGTAGCCCCACA
CTCTGGGTGTGTCTTGAGTGCTTTATACTAGTAACCCATACATACTGGTG
CACCTGTGATTGGTAGAAGATTCTCTTCCCTCTTTGTGTTCGTATTACCT
TTGTGCCAAGCCTCTTGAGGTAGGTATGCAGCGTGTACTCCTCACATTGT
CAGTATATTTATCTGCGAGAGTGGTACTGATGATGCTGCTGTTGTAAAGT
GGTGTAGGAGTCTGCGTGTGGCGCATATTTCCTTGGTTCAAGAGTGACAC
CAACATGTAGTTTTCTCACAGGTGTCCTGCAGATCTTGATATAGGGCTGT
CTATCCAACCAGACTGTAAAGGGTATCTCTAAACTGTAGGTGCTGTGCAT
ACATCCGTGTCAAATTAAGCCCTAAGCTGTTACTCAAAGAGGACTTCTTT
TGGGAGGGGGGATTGTAGTCTCGTTGCTCTTGACTCTCTCTCTCTCTCTC
TTTGTTCACTGTGACCCAAGAATGTTCAGTCACCTCTAACCTCGTTGCGT
TATTTAATCCTAATGATATTGATTGTTATTTTTTTGTGGAAGGTGGGTAT
TGGTCATCACTTAGGCATCCTATTCTCCAACTCCTTTCCTATCTTTTCCT
CCTCCTCTTTGATCCTTCAGGGGATTGACCTGTGGGGACTGACTGTTCAG
AATGAGCCGGAGAACCCTGGTCCATGGGAGGCGTGTGTTTTCAATGCCAG
CTTTGAGGTGAGTTAG
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Coding sequence (CDS) from alignment at C-tenellus_contig9329:929..5844-

>mRNA_C-tenellus_contig9329.1.1 ID=mRNA_C-tenellus_contig9329.1.1|Name=mRNA_C-tenellus_contig9329.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=849bp|location=Sequence derived from alignment at C-tenellus_contig9329:929..5844- (Choristocarpus tenellus KU2346)
GAATTCAGTCATCACGAAATTTCTGTGACAGTATTCGAGACCTCCAAGTA
CGGGGGGGCACTGTTGACAGAATCAGTGCCGTCAGTCAAAAAAGATTGTC
GCAAGTCCTCCCATGCATCATCGGATTCGTCCTCCGACGATTCCTCCAAT
GGATCCTCCGACGATTCCTCTAATGGATCCTCCGAAGATTCCTCCAATGG
ATCCTCGGATGAATCCTCGGATGACTCCCAAGACATGGATTCCTGCCCAC
TGGATGGTCGTGGAACTGTAGTAGTTGACACCAGCACCAAGCTGCAGGAG
ATCCTTGGCTTTGGGGGGGCATTCACCGATGCTGCCACAATCAATCTAAA
CAAGCTCCCTCCAAGTGTACAGACCAAAGTGATGGATGCCTACTTTGGGC
CTACTGGAATAGAGTACTCAATTGGGCGTATCCCTTTGGACAGCTGTGAT
TTCAGCGTAGAGCAGTACAACTTTGATGATCATCCAGGGGACTACAACCT
CTTGAAGTTTGACAACAACATAACAATGGAAACCTACCAAAGGATACCAA
TGATCAAAGAGGCCATCATCCGTGAAGAGAATCTCAACCTCTTCACCTCG
CCCTGGAGCCCACCAGCTTGGATGAAGGTGCCAAGGGATGGGGAGCAGAG
CATGATCAAGAGTGCATGGCCCCAAGGGCTGCTGGATGACCCACGGGTGA
AGGAGGCCTGGGCACTGTACTTCAGCAAGTTCATCAGTGCTTACAGTCAA
CATGGGATTGACCTGTGGGGACTGACTGTTCAGAATGAGCCGGAGAACCC
TGGTCCATGGGAGGCGTGTGTTTTCAATGCCAGCTTTGAGGTGAGTTAG
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