mRNA_C-tenellus_contig851.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A7S0SGK9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGK9_9CHLO) HSP 1 Score: 139 bits (349), Expect = 9.760e-36 Identity = 85/223 (38.12%), Postives = 133/223 (59.64%), Query Frame = 1 Query: 40 AAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSS-DCLPENSTLLLLLQVLKVLLRKQVNRKAMGKQGVQAVTNLLKS-----ITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSK-DEKMQASGLGALQSVCFERAGREVARADVGVIRRVVRLL--VSSSPKVRARALGAVHNLSTDPGLIGVIREEGGLAPLVGMLRHPEPQMCGGAA 681 A +RDF+ N DP SPN + + D M +F ++S+ +C + L L+ LK+L RKQ NR++ G++G+ AV LL + + E ANVILN+CY++ENVD L G+ LV + + D +QA+ GA+QS+CF+ GR R D+ + ++RLL + KV+ RA+GA+HN+S+D I +IR + G+ +V +L+ +P +CG AA Sbjct: 45 AMLRDFVTANEDPRVSPNYKDDRP-----DQMDGLFTLMSAPECAADEDLALHALKALKILSRKQENRQSFGRRGLNAVLRLLVAPPSSRVAGEGANVILNVCYEKENVDAILMCGGLEPLVRFLGERTDPDLQANAAGAIQSICFQEKGRARVR-DLDGVPAMLRLLGECRGNVKVQTRAIGAIHNMSSDADSIRLIRAQEGIPLVVALLKSDQPVICGSAA 261
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A5B8MZ58_9CHLO (ARM repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ58_9CHLO) HSP 1 Score: 134 bits (337), Expect = 1.460e-33 Identity = 76/199 (38.19%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 31 GIAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCLPENSTLLLLLQVLKVLLRKQVNRKAMGKQGVQAVTNL------LKSITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQASGLGALQSVCFERAGREVARADVGVIRRVVRLLVSSSPKVRARALGAVHNLSTDPGLIGVIR 609 G+ + F+ N +P++S N ++E DD+ + ++ S + ++ + L LK+L RKQ NR+A+ G + + + + ++ ECANV+LN CY+R+NV LFL GV+ L + S+D +QA+ GALQSV + GR+ A G++ R+V LL S PKVRARA+GA+HNLS++PG I +IR Sbjct: 53 GLTRKLETFVKENAEPSTSSNYKSEEE-----DDLGPLMELVGS-VIDDHDLMSSALTCLKILSRKQRNRRAIVLTGFKHLASCADFVRNVPTLAAECANVLLNFCYERQNVGLFLSCGGVKVLETYLESEDRGVQANAAGALQSVSYHEEGRKELLASEGLLPRIVNLLASQEPKVRARAVGALHNLSSEPGTIRIIR 245
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A7S0IGD7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGD7_MICPS) HSP 1 Score: 124 bits (312), Expect = 2.230e-29 Identity = 96/272 (35.29%), Postives = 137/272 (50.37%), Query Frame = 1 Query: 34 IAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCLPENSTLLLL-LQVLKVLLRKQVNRKAMGKQGVQAVTNLL-------KSITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQ--ASGLGALQSVCFERAGREVARADVGVIRRVV---RLLVSSSPK--------------VRARALGAVHNLSTDPGLIGVIREEGGLAPLVGMLRHPEPQMCGGAAGTIQNLSREMQSRDQLAALGVVGPLSDLL 768 +A +R+F+ N +SPN + E R D++ I +L+ LP + L LL L+ LK+L RK+ NR+ G++ +AV L ++T E ANV+LN CY++ENV+ LE GV LV + E ++ ++ GA+QSVCF+ GR R GV V L +S P+ RAR +GA+HN+ D I IR G+ LV L + +CG AAG QN+SRE SR G V L+ LL Sbjct: 58 VARTLREFVDANEGARASPNLRDERR-----DELGGITSLLTDGDLPGDQDLALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRASHAVTAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCRSAAAGAVQSVCFQAPGRCRVRDCDGVAALVALMKELDRASMPRDGSAGRFTDDERSMCRARVVGALHNVGADDDAIRAIRACDGIPHLVRALGDVDDGVCGSAAGATQNVSRERASRALFRRGGAVEALTKLL 324
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: C1EIP6_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIP6_MICCC) HSP 1 Score: 122 bits (305), Expect = 1.530e-28 Identity = 95/280 (33.93%), Postives = 142/280 (50.71%), Query Frame = 1 Query: 34 IAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCLPENSTLLLL-LQVLKVLLRKQVNRKAMGKQGVQAVTNLL-------KSITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDE--KMQASGLGALQSVCFERAGREVARADVGVIRRVVRLLVSSSPK----------------VRARALGAVHNLSTDPGLIGVIREEGGLAPLVGMLRHPEPQMCGGAAGTIQNLSREMQSRDQLAALGVVGPLSDLLV-GRHLKSQ 792 +A +R+F+ N D +SPN + E R D++ I +L+ LP + L LL L+ LK+L RK+ NR+ G++ +AV L ++T E ANV+LN CY++ENV+ LE GV+ LV + E + +++ GA+QSVCF+ GR R D + +V L+ + RAR +GA+HN+S D I ++R G+ LV L + + AAG QN+SRE SR G V L+ LL GR +Q Sbjct: 31 VARTLREFVDANEDARASPNLRDERR-----DELGGITSLLTDGDLPGDQDLALLALKTLKILSRKEDNRRRFGRELCRAVVRLALTHPRASHAVTAEGANVVLNACYEKENVEHVLECGGVQPLVRRVADTGESWRCRSAAAGAVQSVCFQAPGRCRVR-DCDGVAALVALMKELDRREGGTRDSSFTDDERSMCRARVVGALHNVSADDDAIRLVRLSDGVPHLVRALGDVDDVVVNSAAGATQNVSRERASRALFRRHGAVEALTKLLARGRDPATQ 304
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A7S3XPP0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPP0_HETAK) HSP 1 Score: 108 bits (270), Expect = 1.130e-24 Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 7 EAVENNVNGIAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCLPENSTLLLLLQVLKVLLRKQVNRKAMGKQGVQAVTNLLKS-----ITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQASGLGALQSVCFERAGREVAR 483 +A+E + + AI +FL NLDP++SPN EA DD+ +F V ++ + L+ +L+V KVL+RKQ NR + V ++ +L S E ANV+LNMCYD +NV F++ G RAL+PL S D +Q S LGALQSV +++ GR R Sbjct: 15 QALETRRDKLKEAIDNFLMANLDPSNSPNLLHEAP-----DDIMPLFEVFGTEVFRRSDLLVPMLKVAKVLMRKQANRALIQDAHVLSLIPVLSSPKNVMAAREAANVVLNMCYDSQNVSTFVQNGGARALLPLTQSADIHLQGSALGALQSVSYQKEGRSALR 173
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A150GKR1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKR1_GONPE) HSP 1 Score: 107 bits (268), Expect = 1.670e-23 Identity = 73/212 (34.43%), Postives = 114/212 (53.77%), Query Frame = 1 Query: 13 VENNVNGIAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCL--PENSTLLLLLQVLKVLLRKQVNRKAMGKQGVQAVTNLL-----KSITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQASGLGALQSVCFERAGREVARADVGV------IRRVVRLLVSSSPKVRARALGAVHNLSTDPGLIGVIR 609 +E++ I A+R F+ N +P++S N + D +FV + + + ++S +LLLL+ LK+L RK+ NR A G G++A+ L I E ANV+LN+CY+ +NV LE V+ L+ + DE++QA+ GA+QS+CF+ GR G I + LL S + KV +RA GA+HNLS+ I +R Sbjct: 20 LESSKARIKVALRSFVDANDNPSTSSNYSSTE------PDPIKVFVAMLENSVVQQDSSWMLLLLRALKILSRKRPNRLAFGSAGLRAIAAALVDPVSNKIAAEGANVLLNVCYEPDNVQALLETPCVQQLLLFLMEDDEELQANAAGAIQSICFQEGGRRQGVEGAGHVYAKGGIPALSSLLESCNSKVVSRAAGAIHNLSSSAEAIRDVR 225
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A7S0PQ95_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PQ95_MICPS) HSP 1 Score: 103 bits (256), Expect = 6.190e-23 Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 289 SITCECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQ--ASGLGALQSVCFERAGREVAR------ADVGVIRRVVRLL-VSSSPKV--RARALGAVHNLSTDPGLIGVIREEGGLAPLVGMLRHPEPQMCGGAAGTIQNLSREMQSRDQLAALGVVGPLSDLLV-GRHLKSQ 792 +IT E ANV+LN CY++ENV+ LE GV LV + E ++ ++ GA+QSVCF+ AGR R A V +++ + RL V+ +V RAR +GA+HN+S D I +IR G+ LV +L + +CG AAG QN+SRE SR G V L+ LL GR +Q Sbjct: 10 AITAEGANVVLNACYEKENVEYVLECGGVEPLVRRVADTGETLRCRSAAAGAVQSVCFQAAGRCRVRDCDGVAALVALMKELDRLSNVTDDERVMCRARVVGALHNVSADDDAIRLIRACDGVPHLVRLLSDDDDGVCGSAAGATQNVSRERASRALFRRGGAVHALTKLLARGRDPATQ 189
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A3P3YJC6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJC6_PLABS) HSP 1 Score: 100 bits (248), Expect = 4.060e-21 Identity = 87/268 (32.46%), Postives = 136/268 (50.75%), Query Frame = 1 Query: 34 IAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAA-IFVVLSSDCLPENSTLLLL---LQVLKVLLRKQVNRKAMGKQGVQAVTNLLKSIT-----CECANVILNMCYDRENVDLFLEVDGVRALVPLINSKDEKMQASGLGALQSVCFERAGREVARADVGVIRRVVRLLVSSS----PKVRARALGAVHNLSTDPGLIGVIREEGGLAPLVG-MLRHPEP-QMCGGAAGTIQNLSREMQSRDQLAALGVVGPLSDLLVGRHLKSQ 792 +A A+R F+ N P SSP +L DD+ A + VV+ P++ LL L +LK+L RK NR G + + AV + + T CANV++N C++R VD + ++GV +V L+ K + + G L+SV ER GR+ A I +V LL + P+V ARA+ +HNL+ D IG +R L+ +L+ P ++ AAG +QN++ + + R +L L VV LS L +G + +Q Sbjct: 11 VADAMRAFVHDNALPESSPYLLA----SLPPDDVDAFVSVVVRVWRCPDSVAEDLLQSSLNILKILCRKDCNRFQFGVRAIGAVVAAMSNSTSMEVLAACANVLMNACHNRSCVDHLVALNGVPGIVQLLECKHAGVVCAAAGVLRSVACERTGRQ-AILQTRAIPLLVPLLSAPQEGPIPRVCARAIATLHNLTCDHQAIGQLRACSDALRLIAVLLQSPHDIRLRASAAGVVQNIALDEECRRELQGLAVVEHLSALALGTDVDAQ 273
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A836CNB1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB1_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.910e-19 Identity = 68/174 (39.08%), Postives = 91/174 (52.30%), Query Frame = 1 Query: 43 AIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIF-VVLSSDCLPENSTLLLLLQVLKVLLRKQVNRKAMGKQGVQAVTNLLKS------ITCECANVILNMCYDRENVDLFLEVDGVRALVPLIN-SKDEKMQASGLGALQSVCFERAGREVARADVGVIRRVVRLLVSSSPK 540 A+ FL N DPA SPN VDD ++ V LL LL+VLK L+RK NR+A G V LL + CECANV+LN+CY+ NV LF + G+ L+ +++ S + + LGALQS+CF+ AGRE AR G + V LL+S+ K Sbjct: 26 AVDAFLRCNADPARSPNLNFPE-----VDDTVLLYNAVAVGPGAHSPVRLLSLLRVLKYLMRKPANRRATGPTCAATVAMLLSNEALSADCACECANVVLNLCYETANVGLFCKHGGMAGLLRMLSPSCSVALHVAALGALQSLCFDAAGRERARVS-GAVDLVAALLLSTEAK 193
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Match: A0A1Y1HM36_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HM36_KLENI) HSP 1 Score: 87.8 bits (216), Expect = 1.430e-16 Identity = 67/235 (28.51%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 19 NNVNGIAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVVLSSDCLPENSTLLLL-LQVLKVLLRKQVNRKAMGKQ------GVQAVTNLLK-------SITCECANVILNMCYDRENVDLFLEVDG-VRALVPLINSKDEKMQASGLGALQSVCFERAGREVARADVGVIRRVVRLLVSSSPKVRARALGAVHNLSTDPGLIGVIREEGGLAPLVGMLRHPEPQMCGGA 678 +N+ + + F+ VN DP SP + N D + + +L + ++ L L L+ LK+L RK N M + +QAV L+ SI E ANV++N C+++ENV++ L +G + +V + + DE +QA+ G LQSV R ALGA+HN+S+DP G+IR + G+ P++ +LR P+ + A Sbjct: 19 SNIAALLGRLETFVAVNEDPGRSPYYK-----NQHADSLDRLVSLLKDPGIEQHPGLALAALKALKILSRKTCNHSGMRRDEKKDGNAIQAVLRFLQAPGKVDESIAAEAANVLMNPCFEKENVEVVLLNEGCIPPMVAFLGAADENLQANVAGVLQSV-------------------------------RTGALGALHNISSDPCSTGIIRRKNGIPPIMKLLRSPQAAIAQSA 217 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig851.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig851.1.1 >prot_C-tenellus_contig851.1.1 ID=prot_C-tenellus_contig851.1.1|Name=mRNA_C-tenellus_contig851.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=265bp PFEAVENNVNGIAAAIRDFLGVNLDPASSPNRQTEARINLAVDDMAAIFVback to top mRNA from alignment at C-tenellus_contig851:11..3701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig851.1.1 ID=mRNA_C-tenellus_contig851.1.1|Name=mRNA_C-tenellus_contig851.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3691bp|location=Sequence derived from alignment at C-tenellus_contig851:11..3701- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig851:11..3701- >mRNA_C-tenellus_contig851.1.1 ID=mRNA_C-tenellus_contig851.1.1|Name=mRNA_C-tenellus_contig851.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=795bp|location=Sequence derived from alignment at C-tenellus_contig851:11..3701- (Choristocarpus tenellus KU2346)back to top |