mRNA_C-tenellus_contig8262.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: D7G183_ECTSI (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G183_ECTSI) HSP 1 Score: 262 bits (669), Expect = 6.740e-84 Identity = 149/258 (57.75%), Postives = 180/258 (69.77%), Query Frame = 1 Query: 1 PLRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQKGPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLHPKHG-LLTMKDLQDAGVVNHIKYGVRLVASSFAPTMQSITDG-KVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTVCFF 768 PLRLNN+APN+GA R RKRVGRG GS HKGSKAR K GFEGGQTP RRIPKRGFKNG D+SFETVSV+RI ++AMGRL P L++MKDLQDAG+V IK+GVRLVA + ++ ++T +GD + E + A+ E + A+ +LP +HLEVSRAS AI AVEA GGTVTC HFN LALR+LLKPEKF LPRRARPPPRLMP+FLD+G+RGYL+P+V+ + F Sbjct: 48 PLRLNNLAPNDGARRDRKRVGRGNGSGTGKTCGKGHKGSKARKGTKRIGFEGGQTPFHRRIPKRGFKNGADESFETVSVDRIYMYIAMGRLRPNDACLISMKDLQDAGIVQDIKFGVRLVAGAKKNSVLGHNSPHRLTGATGDATGAENEVARAASEATKGAK-----------SLPPVHLEVSRASAGAIEAVEAQGGTVTCAHFNRLALRALLKPEKFEELPRRARPPPRLMPFFLDHGRRGYLAPDVQMRNLKLF 294
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A836CA06_9STRA (Ribosomal protein L18e/L15P (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA06_9STRA) HSP 1 Score: 207 bits (526), Expect = 4.670e-63 Identity = 131/266 (49.25%), Postives = 158/266 (59.40%), Query Frame = 1 Query: 1 PLRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQKGP-GFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLH---PKHG----LLTMKDLQDAGVVNHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFV--ILPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTVCFF 768 PL+LN + PN GA ++RVGRG GS +KG++AR P GFEGGQTPL RR+PKRGFKNG D SF+ VS++++ +VAMGRL P+ G +LTMKDLQDAGV+ IK+G++LV + DG + V E A P +HLEVS AS AIAAVEA GGTVTC HFN LALR+LLKP KF +LPRRARPPPRLM FL KRGYLSPEV+ + F Sbjct: 3 PLKLNTLVPNPGAVSQKRRVGRGIGSGRGKTSKRGNKGTRARQGGSVPLGFEGGQTPLHRRLPKRGFKNGADTSFDIVSIDKVFEYVAMGRLRVPVPEPGAPPRMLTMKDLQDAGVIGRIKFGLKLVGGR-----RQTADGDAP---------------MARAVPESAYAAP------------LHLEVSGASAGAIAAVEARGGTVTCAHFNRLALRALLKPHKFAPGLLPRRARPPPRLMARFLSGDKRGYLSPEVQLRNLRLF 236
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A4D9D510_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D510_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.780e-46 Identity = 115/273 (42.12%), Postives = 141/273 (51.65%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQKGP-GFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLH-PKHGLLTMKDLQDAGV--VNHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVI--------------LPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTVCFF 768 L L+++ N GA R RKRVGRG GS G K R + P GFEGGQTP+ RR+PK GFKN + + V + ++ MGRL P L+TMKDL DAG+ N +K+G++L+A G E V+ H+EVSRAS AI AVE AGGTVTCVHFN LALR+LLKPE F + LPRRARPPPRLMP +LD+ +RGYLSPEV+ F Sbjct: 19 LSLSDLHDNPGAKRERKRVGRGIGSGSGKTSGRGMNGQKKRSSVNIPQGFEGGQTPMHRRLPKTGFKNIWAEPLTPLFVGTVQNWIDMGRLVVPADRLMTMKDLVDAGIFKANRVKHGIKLLAR-------------------------------------------GGEHVHTP----FHIEVSRASLGAIDAVEKAGGTVTCVHFNRLALRALLKPEAFRVPVLGEDGQVEETLQLPRRARPPPRLMPLYLDSDRRGYLSPEVQRRNKGLF 244
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: W7U3I7_9STRA (Ribosomal protein L18e/L15P n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3I7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.050e-45 Identity = 115/273 (42.12%), Postives = 141/273 (51.65%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQKGP-GFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLH-PKHGLLTMKDLQDAGV--VNHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVI--------------LPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTVCFF 768 L L+++ N GA R RKRVGRG GS G K R + P GFEGGQTP+ RR+PK GFKN + + V + ++ MGRL P L+TMKDL DAG+ N +K+G++L+A G E V+ H+EVSRAS AI AVE AGGTVTCVHFN LALR+LLKPE F + LPRRARPPPRLMP +LD+ +RGYLSPEV+ F Sbjct: 109 LSLSDLHDNPGAKRERKRVGRGIGSGSGKTSGRGMNGQKKRSSVNIPQGFEGGQTPMHRRLPKTGFKNIWAEPLTPLHVGTVQNWIDMGRLVVPADRLMTMKDLVDAGIFKANRVKHGIKLLAR-------------------------------------------GGEHVHTP----FHIEVSRASLGAIDAVEKAGGTVTCVHFNRLALRALLKPEAFRVPMLGEDGQVEETLQLPRRARPPPRLMPLYLDSDRRGYLSPEVQRRNKDLF 334
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: K3X7J1_GLOUD (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7J1_GLOUD) HSP 1 Score: 161 bits (407), Expect = 4.630e-45 Identity = 106/254 (41.73%), Postives = 148/254 (58.27%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKAR---GTQKGPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLHPKHGLLTMKDLQDAGVV--NHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVKS 750 +RLN + NEGA + KR+GRG GS XX XXX HKG KAR G+ +GPGFEGGQTP+ +R+PKRGF N E V+++++ FV MGRL +TMK+L D+G+V + +K+G++L+ G+H S+ +EVS+AS SAI A+EAAGG++T V+ N LALR+LLKP KF ++P+ ARP P+ + Y+ D KRGYLSPE+++ Sbjct: 43 VRLNTLQDNEGAHKRGKRLGRGIGSGKXXTXXXGHKGQKARSGGGSGRGPGFEGGQTPIYQRVPKRGFNNKFATPMEPVNLDKLQLFVDMGRLDASK-TITMKELVDSGMVTCSRVKHGIKLLGKG-----------------GEH------------------------------LTTSLTIEVSQASKSAIQAIEAAGGSITSVYHNRLALRALLKPHKFELIPQFARPNPKKLTYYTDYEKRGYLSPEIQA 248
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A7S2V348_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V348_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.760e-45 Identity = 100/257 (38.91%), Postives = 142/257 (55.25%), Query Frame = 1 Query: 1 PLRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQKGPGFEGGQTPLIRRIPKRGFKNGP-DKSFETVSVERIARFVAMGRLHPKHGL-LTMKDLQDAGVVNHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKF--VILPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTV 759 PL LNN++PN G+ + R+RVGRG GS HKG K R KG GF GGQTPL R +PKRGF N K E +++ R+ ++ MGRL PK +T++D++++G+++ IK+GV+L+A E + +P +++EV+RAS AI AVE GG+V C +FN L LR+ L P KF ++PRRA PPP++MPY+LD RGYLSPE++ + Sbjct: 40 PLCLNNLSPNPGSKKQRRRVGRGIGSGRGKTCGRGHKGQKKRKPAKGGGFIGGQTPLHRSLPKRGFSNKRFQKPLEQLNLGRLQLWIDMGRLIPKPDQPITLRDIKESGLISRIKHGVKLLAK----------------------------------------------EKDLVHMP-LNIEVTRASKEAIKAVEEKGGSVVCSYFNRLGLRAHLFPHKFHPALVPRRAAPPPKIMPYYLDYNNRGYLSPEIQLKKI 249
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A6U0WPW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0WPW9_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.980e-45 Identity = 104/251 (41.43%), Postives = 135/251 (53.78%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKAR-GTQKGPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMG--RLHPKHGLLTMKDLQDAGVVNHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVK 747 L LN + N GA RPRKR GRG GS HKG KAR G GFEGGQTPL R +PKRGF N K + +++V I + G R+ LTM+DL G+ ++ GV+L+ +GK R T P +H+EVSRAS SAI A+E AGG++TCV++N +ALRSL+ PEKF + PR ARPPP+LMP++LD RG+LSPE++ Sbjct: 37 LTLNMLRDNAGANRPRKRKGRGVGSGLGKTSGRGHKGQKARAGRNPFLGFEGGQTPLYRILPKRGFTNKFAKEYASINVGAIQDKIDAGALRVPTDSNPLTMRDLVRCGLTTRLRSGVKLLG-----------EGK-----------------------------------ERVTTP-LHVEVSRASQSAITAIEGAGGSITCVYYNPIALRSLMFPEKFQLAPRIARPPPKLMPFYLDYQNRGFLSPEIQ 240
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: F0WVJ0_9STRA (50S ribosomal protein L15 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVJ0_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.940e-44 Identity = 102/257 (39.69%), Postives = 145/257 (56.42%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKARGTQK---GPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLHPKHGLLTMKDLQDAGVVN--HIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVKSPTV 759 +RLNN+A NEG+ + KRVGRG GS HKG KAR K GPGFEGGQTP+ +R+PKRGF N ++++++ F+ MGR+ H + T+K+L D G+V +K+G++L+ GK G+E + T P + +EV++AST AI AVEA GG++T V++N L LR+LLKP KF +LPR ARP P+ M Y+ + KRGYLSPE+++ + Sbjct: 50 VRLNNLADNEGSHKRSKRVGRGIGSGKGKTCGRGHKGQKARAGGKAGRGPGFEGGQTPIYQRVPKRGFNNRFATPMTVINLDKLQLFIDMGRIDANHKI-TLKELVDCGMVTCCKVKFGIKLL-------------GK------------------------------GAEHL---TTP-VEIEVTQASTCAIKAVEAVGGSITAVYYNRLGLRALLKPHKFDVLPRFARPNPKKMRYYTNYEKRGYLSPEMQAKKL 258
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A484EHX2_BRELC (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHX2_BRELC) HSP 1 Score: 158 bits (399), Expect = 5.370e-44 Identity = 106/253 (41.90%), Postives = 144/253 (56.92%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKAR---GTQKGPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLHPKHGLLTMKDLQDAGVV--NHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVK 747 +RLN + N+GA + KR+GRG GS XX XXX HKG KAR G+ +GPGFEGGQTPL +R+PKRGF N ETV+++++ FV MGRL +T+K L D+G+ + +K+G++L+ + G H I +EVS+AS SAI AVEA GGT+T V+ N LALR+LLKP KF ILP+ ARP P+ + Y+ + KRGYLSP+++ Sbjct: 34 VRLNTLRDNDGAHKRGKRLGRGIGSGKXXTXXXGHKGQKARSGGGSGRGPGFEGGQTPLYQRVPKRGFNNNFATPMETVNLDKLQLFVDMGRLDANK-TITIKSLVDSGLATCSRVKHGIKLLGNG-----------------GQH------------------------------LTAKIDIEVSQASKSAIKAVEAVGGTITSVYHNRLALRALLKPHKFEILPQPARPNPKKLTYYTNYDKRGYLSPKIQ 238
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Match: A0A3F2RRV0_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRV0_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.590e-44 Identity = 99/253 (39.13%), Postives = 143/253 (56.52%), Query Frame = 1 Query: 4 LRLNNIAPNEGATRPRKRVGRGKGSXXXXXXXXXHKGSKAR---GTQKGPGFEGGQTPLIRRIPKRGFKNGPDKSFETVSVERIARFVAMGRLHPKHGLLTMKDLQDAGVV--NHIKYGVRLVASSFAPTMQSITDGKVTDTSGDHSENAVEASEASVEVEEDAEGEPGSEEVNRATLPSIHLEVSRASTSAIAAVEAAGGTVTCVHFNTLALRSLLKPEKFVILPRRARPPPRLMPYFLDNGKRGYLSPEVK 747 +RLN + N+GA + KR+GRG GS HKG KAR G+ +GPGFEGGQTPL +R+PKRGF N ETV+++++ FV MGRL + + T+KDL D+G+V + +K+G++L+ + Q++T + +EVS+AS +AI AVEA GG +T V+ N LALR+LLKP KF ++P+ ARP P+ + Y+ + KRGYLSPE++ Sbjct: 28 VRLNTLRDNDGAHKRSKRLGRGIGSGKGKTCGRGHKGQKARSGGGSGRGPGFEGGQTPLYQRVPKRGFNNKFATPMETVNLDKLQLFVDMGRLDASNKI-TIKDLVDSGIVTCSRVKHGIKLLGNGG----QNLT-------------------------------------------AKLDIEVSQASETAIKAVEAVGGNITSVYHNRLALRALLKPHKFEMIPQAARPNPKKLKYYTNYEKRGYLSPEIQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8262.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8262.2.1 >prot_C-tenellus_contig8262.2.1 ID=prot_C-tenellus_contig8262.2.1|Name=mRNA_C-tenellus_contig8262.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=257bp PLRLNNIAPNEGATRPRKRVGRGKGSGRGKTCGKGHKGSKARGTQKGPGFback to top mRNA from alignment at C-tenellus_contig8262:3850..5727+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8262.2.1 ID=mRNA_C-tenellus_contig8262.2.1|Name=mRNA_C-tenellus_contig8262.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1878bp|location=Sequence derived from alignment at C-tenellus_contig8262:3850..5727+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8262:3850..5727+ >mRNA_C-tenellus_contig8262.2.1 ID=mRNA_C-tenellus_contig8262.2.1|Name=mRNA_C-tenellus_contig8262.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=771bp|location=Sequence derived from alignment at C-tenellus_contig8262:3850..5727+ (Choristocarpus tenellus KU2346)back to top |