mRNA_C-tenellus_contig8251.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A7S2SKH2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKH2_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.320e-19 Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSWERKVRSPGEKGAHYDSNMKSLTKAACQDLRDEYKHRMTVEEARKDVEAAKAEVEYIEMKMLFLSLKV---AAAEDEAGTKCPKACERLKLGPGLLEAANGKL 567 QV+SSILW ILGA HPYYMEP GGWEGT P+ HDP+VI Y EEV GT K AIL Q+ ++++ + ++L+ E+++ +T E+A +++ A EVE++ KM +L KV AA + ++ PKA +RL +GP LL A ++ Sbjct: 251 QVVSSILWCILGAMHPYYMEPDFGGWEGTAPADDEEHDPEVIEYDEEVYFGTAKWAILEQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXDLRARLEPVVEELQLEFRNLLTEEQAEEELRIALQEVEFVTQKMAYLRAKVDGCRAAGRDPSSEMPKALQRLGMGPRLLRRAKERV 432
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A7S3KY03_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY03_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.620e-9 Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTE-EVRRGTIKHAILGQLRNPPE---GFEGVIRAHFACKRRMVLSMIDSW 270 QVL SI ILG EHPYY+EPG GGWE ++ + H P + ++ ++R GT+K+A+L + P F+ VI AHF + +L + W Sbjct: 260 QVLVSIQGLILGVEHPYYLEPGFGGWEESIVNHKGAHVPPHVKSSDAKIREGTVKYAMLETCKATPRYLHAFQDVITAHFTHHKESILKEVRGW 353
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A316V045_9BASI (UBC core domain-containing protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316V045_9BASI) HSP 1 Score: 71.2 bits (173), Expect = 1.050e-8 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSW 270 QVL S+ ++ E P EPG W GT S H YT+ +RR T++HA+L L+NPPE +E V++ HF KR +++ +D W Sbjct: 803 QVLLSLSSLVMAEEEPAVNEPGWENWRGTDRSMH---------YTKNLRRQTVRHAMLRTLQNPPEPWEEVVKGHFRQKRGVIVKQLDDW 883
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A2P6ND81_9EUKA (Baculoviral IAP repeat-containing protein 6 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6ND81_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 1.090e-8 Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSWERKVRSPGEKGAHYDSNMKSLTK 339 QVL SI ++ E P++ EPG GT D Y + +R T+K A+L QL+NPP GFE VIR+HF KR VLS ++ W ++ SPG K ++ L K Sbjct: 2941 QVLVSIQ-SLIFVEQPFFNEPGFENLMGTQNGDKQSRD-----YNQNIRLQTLKWAMLHQLKNPPAGFEDVIRSHFKLKRESVLSEVEVWVKE--SPGGKQQQMRDQLEELKK 3045
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A0L0D5I5_THETB (Ubiquitin-conjugating enzyme family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5I5_THETB) HSP 1 Score: 70.5 bits (171), Expect = 2.510e-8 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSWE 273 QVL SI ++ PY+ EPG+ GT PS D + + YT + T++ AILGQLRNPP+GFE VIRAH KR+ +L+M W+ Sbjct: 3993 QVLVSIQ-SLIMVPEPYFNEPGYESSRGT-PSG----DAENLSYTLNIYTYTLQTAILGQLRNPPKGFEDVIRAHLYMKRKEILAMAARWK 4077
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A1X6MTJ1_9APHY (UBC core domain-containing protein n=1 Tax=Postia placenta MAD-698-R-SB12 TaxID=670580 RepID=A0A1X6MTJ1_9APHY) HSP 1 Score: 68.6 bits (166), Expect = 6.920e-8 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSW 270 QVL SI IL E PY EPG G GT P+ Y+ VRR ++ A+LG L+NPPE FE VIR H+ K R ++ +D W Sbjct: 716 QVLISIQSMIL-CEEPYLNEPGWAGSAGT---------PQSRAYSANVRRMVVRTAMLGNLKNPPEPFEDVIRTHYRLKARSIMKQLDEW 795
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A165E931_9APHY (Ubiquitin conjugating enzyme family protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165E931_9APHY) HSP 1 Score: 68.6 bits (166), Expect = 7.090e-8 Identity = 41/90 (45.56%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSW 270 QVL SI IL E PY EPG W A S P+ Y+ VRR +K A+LG L+NPPE FE VIR HF K R +++ +D W Sbjct: 765 QVLISIQSMIL-CEEPYLNEPG---W------AQSAGTPQSRAYSANVRRMVVKTAMLGNLKNPPEPFEDVIRTHFRLKARSIMAQLDDW 844
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A137QSM7_9AGAR (Baculoviral IAP repeat-containing protein 6 (Fragment) n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137QSM7_9AGAR) HSP 1 Score: 68.2 bits (165), Expect = 9.140e-8 Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSW 270 QVL SI IL + PY EPG GT P+ + Y+ VRR +K A+LG LRNPPE FE VIR HF K R + + +D W Sbjct: 732 QVLISIQSMIL-CDEPYLNEPGWASDGGT---------PQSLAYSANVRRMVVKTAMLGNLRNPPEPFEEVIRTHFRLKARSISAQLDEW 811
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A165R518_9APHY (UBC core domain-containing protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165R518_9APHY) HSP 1 Score: 67.8 bits (164), Expect = 1.220e-7 Identity = 39/90 (43.33%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSW 270 QVL SI IL E PY EPG GT P+ Y+ VRR +K A+LG L+NPPE FE VIR HF K + +++ +D+W Sbjct: 757 QVLISIQSMIL-CEEPYLNEPGWANSGGT---------PQSRAYSANVRRMVVKTAMLGNLKNPPEPFEDVIRTHFRLKAKSIIAQLDNW 836
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Match: A0A2R5GBE9_9STRA (Ubiquitin-conjugating enzyme E2 Z n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBE9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.460e-7 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 1 QVLSSILWGILGAEHPYYMEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFEGVIRAHFACKRRMVLSMIDSWERKVRSPGEKGAHYDSNMKSLTK 339 QVL SI ILGAE+PY+ EPG GT + Y E++R TI+HAI+ Q+ +PP FE ++R HF KR + + + W + G AH +N+++L K Sbjct: 590 QVLVSIQSAILGAEYPYFNEPGAEVEWGTARGRRARRLHTNGGY-EKLRESTIRHAIIAQILDPPRFFEDLVREHFRLKRNHIQTTVQGWVAEAEEFGP-SAHL-TNLRALQK 699 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8251.1.1 >prot_C-tenellus_contig8251.1.1 ID=prot_C-tenellus_contig8251.1.1|Name=mRNA_C-tenellus_contig8251.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=192bp MEPGHGGWEGTMPSAHSVHDPKVIWYTEEVRRGTIKHAILGQLRNPPEGFback to top mRNA from alignment at C-tenellus_contig8251:742..6397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8251.1.1 ID=mRNA_C-tenellus_contig8251.1.1|Name=mRNA_C-tenellus_contig8251.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5656bp|location=Sequence derived from alignment at C-tenellus_contig8251:742..6397+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8251:742..6397+ >mRNA_C-tenellus_contig8251.1.1 ID=mRNA_C-tenellus_contig8251.1.1|Name=mRNA_C-tenellus_contig8251.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=576bp|location=Sequence derived from alignment at C-tenellus_contig8251:742..6397+ (Choristocarpus tenellus KU2346)back to top |