mRNA_C-tenellus_contig8250.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: D7FRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN7_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.200e-47 Identity = 91/187 (48.66%), Postives = 131/187 (70.05%), Query Frame = 1 Query: 1 KLMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVN---ALDTFLASSINAEPKRAGVADVTVTTKSLRPVLVNLKGYPLAS-FGTISYFLVVMEEV 549 +LMC+W+M+T+NA +CGA +V+ +GML+A FSP NRI LE V+DVMS MQQLQRA G G+ R+VPNT+ A QPS Q R++ A PP+ I HT++ W+ LMG+TAEEA+ P +L+ G E N AL+T + + I + KRA + D++V T+ LR + V ++ YPL + G ++ L+VMEE+ Sbjct: 40 QLMCQWLMKTDNATECGALCDVFSHGMLRAHFSPDNRIKRLEIVFDVMSLMQQLQRAVGQGELRMVPNTLALATQPSQQARLVLSAVPPYGITHTNEAWTALMGHTAEEAKMFPFTLMNG-PAEANNGDALETLVQTCIGSNVKRAEMVDLSVVTRDLRQLAVAVQAYPLGTPDGATTHLLLVMEEI 225
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A6H5KUH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH5_9PHAE) HSP 1 Score: 179 bits (453), Expect = 6.280e-44 Identity = 91/186 (48.92%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVN---ALDTFLASSINAEPKRAGVADVTVTTKSLRPVLVNLKGYPLAS-FGTISYFLVVMEEV 549 LMC+W+M+T+NA +CGA +V+ +GML+A FSP NRI LE V+DVMS MQQLQRA G G+ R+VPNT+ A QPS Q R++ A PP+ I HT++ W+ LMG+TAEEA+ P +L+ G E N AL+T + + I + KRA + D++V T+ LR + V ++ YPL + G ++ L+VMEE+ Sbjct: 392 LMCQWLMKTDNATECGALCDVFSHGMLRAHFSPDNRIKRLEIVFDVMSLMQQLQRAVGQGELRMVPNTLALATQPSQQARLVLSAVPPYGITHTNEAWTALMGHTAEEAKMFPFTLMNG-PAEANNGDALETLVQTCIGSNVKRAEMVDLSVVTRDLRRLAVAVQAYPLGTPDGATTHLLLVMEEI 576
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.090e-31 Identity = 77/180 (42.78%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSD-QMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVNALDTFLASSINAEPKRAGVADVTVTTKSLRPVLVNLKGYPLASFGTISYFLVVM 540 L CRWM+RTENAA CGA E + GML+A++SP +++ LE +DVM FMQQLQRA G DFRVVPNT+ A P D R I AEPP+ I H S W L GY +EEA G +LL+G + A+ F+ + + +V TK+ P + YPL++ G ++++L + Sbjct: 272 LSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASGLEDFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGA---VRARHCCSMEVVNYTKAGVPFANYIVAYPLSTDGRVTHYLATI 448
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A7S3UTR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTR3_HETAK) HSP 1 Score: 125 bits (314), Expect = 1.120e-26 Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQN---------RITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGG 363 LMCRWM+RT NA QCG E+Y +GML+A+F + ++ L V+DVMSFMQQLQR G F +VPNTV A Q +D+ R++C A+PP+ + H + W L G EE G PL+ L GG Sbjct: 286 LMCRWMLRTVNAVQCGGLCELYNHGMLRAEFGEPSSDGPPGGGCKLRRLRLVFDVMSFMQQLQRCSGKACFHIVPNTVAMAKQGADEARLVCAAQPPYAVAHVNRAWQALFGQGLEEVYGRPLAFLDGG 414
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A7R9ZM03_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM03_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.010e-23 Identity = 64/186 (34.41%), Postives = 100/186 (53.76%), Query Frame = 1 Query: 1 KLMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARG-CPLSLLKGGDLEVNALDTFLASSINAEPKRAGVADVTVTTKSLRPVLVNLKGYPLASFGTISYFLVVMEEVHP 555 ++M RW+M TENAAQCGA EV K GML KF+ ++I LE ++DVM+ M QL++A GS F VVPNTV+ + D ++ LA+ P+ I + W + Y AE+ G +L+G + A++ + P A V T + R + +PL++ I+++L++ V P Sbjct: 135 QMMARWVMTTENAAQCGARMEVTKQGMLCCKFNSAHKIIGLELMFDVMALMLQLKQAAGSDTFSVVPNTVQTCQRNFDMPMLMMLADEPYTIVQVNKLWENMSNYQAEQVVGKSSCRILEGEATDPTAVEALINEIRYKRPASAMVVHYKKTGERFRNFFL---AFPLSTDSRITHYLMLSTHVEP 317
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.830e-22 Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 7 MCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLE-VNALDTFLASSINAEPKRAGVADVTVT-TKSLRPVLVNLKGYPLASFGTISYFLVVMEE 546 M RW M T NA GA E GMLKA F+ +N I+S++ ++DVMSFMQQL ACG G F VVPN++ QPS + RVIC A P I + W + G+T EARG +++G + + V D L S+ A+ + + TV KS +P L ++ +P+ + +++FL V+EE Sbjct: 407 MTRWTMSTTNAMSKGALAECSLEGMLKATFADENTISSVDLIFDVMSFMQQLPEACG-GPFEVVPNSMFMLSQPSKEARVICSANAPFNIEQANQPWLDICGFTEAEARGKTFKIIQGDETDFVKVAD--LMRSVQAKLPHSML---TVNYKKSGQPFLNFVRVFPICTGSEVTHFLSVIEE 582
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A7S2D3Z7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3Z7_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.490e-21 Identity = 68/185 (36.76%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQN-RITSLEFVYDVMSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVNALDTFLASSINAEPKRAGVADVTVT-TKSLRPVLVNLKGYPLASFGTISYFLVVMEEVH 552 +MCR +M T NA GA E GMLK F+ N ++ S+E V+DVM+FMQQL +ACG G F V+PN+V + SD+ RV+ A P I H + W L G++ +E G PL + G N T L ++++ ++ + +TV KS +P + ++ +PL + +++FL V EE H Sbjct: 8 IMCRVVMSTTNAIAKGAVVECSLEGMLKVFFTEDNTQLRSVELVFDVMNFMQQLSQACG-GSFEVIPNSVGMLSKESDEARVVISALQPFRIEHVNQSWMNLCGFSHKEVYGQPLRAIHQGIETDNEKITELMNTMH---RKLSHSILTVNYKKSGQPFMNFVRVFPLCTGPDVTHFLYVAEEQH 188
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A835Z9E6_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 8.080e-19 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 142 MSFMQQLQRACGSGDFRVVPNTVENAHQPSDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVNALDTFLASSINAEPKRAGVADVTVTTKSLRPVLVNLKGYPLASFGTISYFLVVM 540 M F+QQLQRA G+ +FRV+PNT+ A PSD+ R + A+ PH I H S W+ GY A+EA G +LL+G + AL F+ + A DV TK+ P + YPL + G + ++L + Sbjct: 1 MGFIQQLQRASGAEEFRVIPNTLAMAQAPSDEARFVVTADAPHVIVHVSPAWTAACGYAADEAVGRTPALLQGPLTDAAALARFMEG---VRRRHAAAMDVVNYTKAGAPFAARVVAYPLVTDGRVMHYLAAL 130
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: A0A1E7FV49_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV49_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.130e-19 Identity = 56/141 (39.72%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGSG-DFRVVPNTVENAHQPS-DQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGDLEVNALDTFLASSINAEP 420 LMC ++ RT+NA CGA + GML+A FS N++ S+E V+D M FMQQL A G + +V+P ++E A P ++ RVI A P+ + H +++W+ L YT EA G PL L GD + D L N P Sbjct: 100 LMCPFVFRTQNAVLCGALTDCVVPGMLRANFSKNNKLLSMELVFDAMGFMQQLDGANGGNINAQVIPGSLEMALVPCPNEARVITEATSPYRVVHVNEQWTRLTSYTQTEAEGKPLLHLLLGDSSGSGADESLEDVTNGRP 240
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Match: B7FWL4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWL4_PHATC) HSP 1 Score: 96.7 bits (239), Expect = 9.670e-17 Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 4 LMCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQQLQRACGS-GDFRVVPNTVENAHQP-SDQMRVICLAEPPHCICHTSDRWSMLMGYTAEEARGCPLSLLKGGD 366 LMC ++ R+++A CGA E GML+A FSP+N++ S+E VYD M FMQ L+RA G+ G F+++P ++E A P + + RVI LAE P I + + ++ GYT EA G L GG+ Sbjct: 670 LMCPFIFRSQDAVLCGALSECVMPGMLRAHFSPRNKLVSVEMVYDAMGFMQLLERASGNEGTFQIIPGSLEMALAPINTEARVITLAEAPFLIVNVNAEFTKTTGYTQLEAEGKEYLSLLGGE 792 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8250.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8250.2.1 >prot_C-tenellus_contig8250.2.1 ID=prot_C-tenellus_contig8250.2.1|Name=mRNA_C-tenellus_contig8250.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=202bp MCRWMMRTENAAQCGAPFEVYKYGMLKAKFSPQNRITSLEFVYDVMSFMQback to top mRNA from alignment at C-tenellus_contig8250:795..4973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8250.2.1 ID=mRNA_C-tenellus_contig8250.2.1|Name=mRNA_C-tenellus_contig8250.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4179bp|location=Sequence derived from alignment at C-tenellus_contig8250:795..4973+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8250:795..4973+ >mRNA_C-tenellus_contig8250.2.1 ID=mRNA_C-tenellus_contig8250.2.1|Name=mRNA_C-tenellus_contig8250.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=606bp|location=Sequence derived from alignment at C-tenellus_contig8250:795..4973+ (Choristocarpus tenellus KU2346)back to top |