mRNA_C-tenellus_contig8242.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.040e-68 Identity = 108/147 (73.47%), Postives = 124/147 (84.35%), Query Frame = 1 Query: 1 SRHFIQDETMRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGASPQV 441 +RH+I+DETMRTLFGLVPFYGG +GPMD MVK+TLASV+ IDVR++ G+TLLIL CQH CEDLVEPILAKGA+P A N VG+ ALHY C+ DS S DA EALLWRGA+ ST ETTYGCTPLHYAA SGD E+CALL+EHGA P+ Sbjct: 53 NRHYIKDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEDLVEPILAKGANPTAVNAVGICALHYTCFADSLSYDAAEALLWRGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKT 199
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE) HSP 1 Score: 214 bits (546), Expect = 9.090e-62 Identity = 107/181 (59.12%), Postives = 123/181 (67.96%), Query Frame = 1 Query: 4 RHFIQDETMRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACE-----------------------------------DLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGASPQV 441 RH+I+DETMRTLFGLVPFYGG +GPMD MVK+TLASV+ IDVR++ G+TLLIL CQH CE DLVEPILAKGA+P A N VG+ ALHY C+ DS S DA EALLW+GA+ ST ETTYGCTPLHYAA SGD E+CALL+EHGA P+ Sbjct: 4 RHYIKDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEVRLVETYRLRQPHAGLKTTLCSSVLECGFHKFQALDLVEPILAKGANPTAVNAVGICALHYTCFADSLSYDAAEALLWKGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKA 184
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A482SRH0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRH0_9ARCH) HSP 1 Score: 149 bits (376), Expect = 4.550e-39 Identity = 69/136 (50.74%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 22 ETMRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGA 429 E + L +PFYG G+ D +V+S L+S+ +ID +D+ GNTLL+L CQ+ CEDL ++ KGA+P A N G S LH+ACY DSSS + LL GA+P E+ YGCTPLHY AGSGD E C L+L++GA Sbjct: 102 EPVDVLLQFIPFYGQGDPANDSIVRSALSSLSIEDIDAKDEYGNTLLLLACQYRCEDLARIMINKGANPNAVNTAGASCLHFACYQDSSSLPIAKVLLQNGANPDVAESNYGCTPLHYCAGSGDLEFCKLILQYGA 237
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI) HSP 1 Score: 132 bits (333), Expect = 4.570e-33 Identity = 67/141 (47.52%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 16 QDETMRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPL---ATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGA 429 Q++ ++ L +P+ G G+ D MV+S L++ A + RD GNTLLIL CQ+ C+ LV ILA+G + A N G ALH+ACY DS LL RGA+P +E TYGCTPLHYAAG+GD LC L+E GA Sbjct: 113 QEDKLKLLVEFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGA 253
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.720e-31 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 100 TLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGA 429 TL+++ +ID +D+ GNTLL+L CQ+ CEDLV +L KGAD A N G LH+ACY +S+S + LL GADP E+T+GCTPLHY AG+GD E C LLL +GA Sbjct: 1 TLSALSVEDIDSQDEYGNTLLLLACQYRCEDLVRIMLNKGADANAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGA 110
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: X0X1N5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0X1N5_9ZZZZ) HSP 1 Score: 111 bits (278), Expect = 2.240e-27 Identity = 56/142 (39.44%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 19 DETMRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQH---ACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGASP 435 ++ + L ++P++ G+ +D +VK T+ + N++ RD++GN+LL L+C H ACE L+ +++KG+DP A N G + LH+ Y D+ S + + L+ GA+ E +GCT LHYAA GD +LC +LLE GASP Sbjct: 59 EQMVEILQEIIPYFNQGDVNIDEIVKDTIERLPLDNLENRDKDGNSLL-LICSHFSGACE-LIPLLISKGSDPNAQNTFGETCLHFTSYTDTYSPETAKVLVLNGANAEVQEIRFGCTALHYAASIGDTDLCRILLEGGASP 198
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A7S0XEW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEW9_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.320e-26 Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 1 Query: 163 ILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGA 429 +L CQ+ CEDLV ++ KGADP A N +GVS+LH+ACY +SSS + + LL GA+P E+TYGCTPLHY AG+GD C LL+ +GA Sbjct: 1 LLACQYKCEDLVRIMINKGADPNAVNNLGVSSLHFACYRESSSINIAKLLLQFGANPEVKESTYGCTPLHYCAGTGDLPFCKLLITYGA 89
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A835YY32_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY32_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.510e-25 Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 37 LFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGA-DPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGASPQVC 444 LF +P+YG G+ +D V++ + + + D GNTLLIL Q+ +L+ ILAK D A N G ALH+AC+ S AL+ G+ +E TYGCTPLHYAAGSG +LC L+ GA C Sbjct: 1 LFDFIPYYGAGDASVDGRVRAMVQAAGQEELCGIDHYGNTLLILAAQYKAGELMHAILAKDCIDVNAVNDAGACALHFACFSASLDVLVARALIANGSKVRVVERTYGCTPLHYAAGSGHVDLCKDLVAAGAIVATC 137
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: A0A835YP16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP16_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.040e-22 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 16 QDETMRTLFGLVPFYGGGEG-----------PMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPSTIETTYGCTPLHYAAGSGDEELCALLLEHGA 429 +D+ + LF L+P G G+G LA+++ + ID RD+ G TLL CQH C DLV P+LA+GA A +G G + LHYA Y ++ AV ALL GADP+ E Y E CALLL HGA Sbjct: 182 RDDGLCALFELLPLCGDGDGGXXXXXXXXXXXXXXXXXXXLATLRPTAIDTRDEGGGTLLTRACQHHCWDLVAPLLARGAAAAAADGAGAAPLHYAAYAGAAGAPAVRALLRAGADPAAREPAYXXXXXXXXXXXXXXEACALLLAHGA 330
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Match: UPI000C71969A (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71969A) HSP 1 Score: 65.5 bits (158), Expect = 1.470e-9 Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 64 GGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQHACEDLVEPILAKGADPLATNGVGVSALHYACYVDSSSRDAVEALLWRGADPST-----IETTYGCTPLHYAAGSGDEELCALLLEHGASPQV 441 G E ++++ + + + +DV+D+ GNT L CE+L+E +L K A+P N G++ LH C +S++ D V L + ++ G TPLHYAA E L LLL A+P + Sbjct: 297 GDEDSVNMLFELSNGKYQPVQVDVQDKLGNTPLHYAAYEFCENLMELLLRKDANPNLANVEGLTPLHIVCIGNSNNIDLVNMLFELSNEKYQPVQVDVQDKLGNTPLHYAAYEFCENLMELLLRKDANPNL 427 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8242.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8242.1.1 >prot_C-tenellus_contig8242.1.1 ID=prot_C-tenellus_contig8242.1.1|Name=mRNA_C-tenellus_contig8242.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp MRTLFGLVPFYGGGEGPMDLMVKSTLASVKASNIDVRDQEGNTLLILVCQback to top mRNA from alignment at C-tenellus_contig8242:5050..6383+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8242.1.1 ID=mRNA_C-tenellus_contig8242.1.1|Name=mRNA_C-tenellus_contig8242.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1334bp|location=Sequence derived from alignment at C-tenellus_contig8242:5050..6383+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8242:5050..6383+ >mRNA_C-tenellus_contig8242.1.1 ID=mRNA_C-tenellus_contig8242.1.1|Name=mRNA_C-tenellus_contig8242.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=420bp|location=Sequence derived from alignment at C-tenellus_contig8242:5050..6383+ (Choristocarpus tenellus KU2346)back to top |