mRNA_C-tenellus_contig8216.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: D7FJ53_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ53_ECTSI) HSP 1 Score: 234 bits (597), Expect = 4.180e-63 Identity = 119/210 (56.67%), Postives = 158/210 (75.24%), Query Frame = 3 Query: 984 NPAGGHVRRDAEMVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEEAVFEQA 1613 NP GG+VRR+ E+ NV NYL EQ V + +S+R+HM +V RSA NE+ IL R+ P L+ RVL+ VH DA+ IIP+ K++PP FV+AIL++LRP+ Y QGEVV+++ SQGVYFV +GIAEAYV+V G A EEKV IV TG+FFGYTRF+A+ L +D+A++AFT L VYLLSNSSI ++L +HP L + LR+ LE A+F+QA Sbjct: 859 NPTGGNVRRNLELKNVENYLEEQKVGAHLGDSVRTHMMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPVLKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVT--GGAGTEEEKVKGIVSTGKFFGYTRFLASFLEEDMAVKAFTQLYVYLLSNSSIRYLLQYHPFLAEELRMGLEAAIFQQA 1066
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A6H5L5H5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H5_9PHAE) HSP 1 Score: 199 bits (506), Expect = 2.920e-54 Identity = 102/174 (58.62%), Postives = 133/174 (76.44%), Query Frame = 3 Query: 1092 MAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEEAVFEQA 1613 M +V RSA NE+ IL R+ P L+ RVL+ VH DA+ IIPI K++PP FV+AIL++LRP+ Y QGEVV+++ SQGVYFV +GIAEAYV+V G A EEKV IV TG+FFGYTRF+A+ L +D+A++AFT L VYLLSNSSI ++L +HP L + LR+ LEEA+F+QA Sbjct: 1 MMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVT--GGAGSEEEKVKGIVSTGKFFGYTRFLASFLEEDMAVKAFTQLYVYLLSNSSIRYLLQYHPFLAEELRMGLEEAIFQQA 172
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A7S3URQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URQ1_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 2.010e-10 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 3 Query: 1152 APNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVK----------------------VPVVGQADET-EEKVVAIVPTGRFFGYTRFMAA 1463 A LR VL Q+H+D I I +F ++ F+ +LQ++ P + +G+ VY SQG+Y V+RG+AE YV+ +ET ++K+++IVP G+ FGY F+ A Sbjct: 4 AARLRQEVLLQIHEDHIPKIVLFNNKDASFIAKVLQYMVPVKFSEGDEVYGPDEGSQGLYCVVRGVAEVYVEERPRRIFGHHGSSGSVXXXXXXXXXXXXXNETVQQKLLSIVPEGKLFGYVDFLLA 130
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A7S1CDH6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.790e-9 Identity = 48/193 (24.87%), Postives = 90/193 (46.63%), Query Frame = 3 Query: 1017 EMVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEE 1595 +M V YL ++ + +R + Y ++ RS +E IL ++ NLR++V+ Q + D I I + Q GFVTA++Q ++P + GE + + +YF++RG E + + D+T + + G +FG ++ ++R A A H + L+ + + P + L A +E Sbjct: 423 KMDEVKEYLRDRRFPVPLAKRVRKYFEYYMDRRSIFDENVILSELSNNLRSQVVMQSNHDTISRIHFLREQDKGFVTAVMQRIKPMFVVAGERIMMEGDVGKEMYFLLRGTVEISCNLRENVKHDDT----IGLFTEGHYFGEDALLSGNVRPYNAT-AVGHCDTFSLAKEDLEMSIFHFPDSRRVLEEAAKE 610
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A6H5KGH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH2_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.290e-8 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 1 VGYGDIKPLSDQERAIACFTMVCGTTMFSYVIGSVSNLV 117 VGYGD+ P +D ER IAC TMVCGTTMFSYVIGSVS LV Sbjct: 913 VGYGDLVPTNDLERMIACLTMVCGTTMFSYVIGSVSTLV 951
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A250WRH6_9CHLO (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRH6_9CHLO) HSP 1 Score: 67.4 bits (163), Expect = 5.710e-8 Identity = 35/115 (30.43%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 1011 DAEMVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAE 1355 D + V +L E+G+ ++ IR + YV +E+DI++ + LR+RVL ++ D I+ +P FK Q P + ++ ++R + YM+G++V QG+YF+ G E Sbjct: 481 DTKRHQVRVFLKERGIPKKLATRIRKYFHYVSMREVRADEKDIVEELPVKLRSRVLYHMYKDTIEKVPGFKDQHPDLLAMVVNNIRLEYYMKGDIVSCQGDPPQGMYFIGEGKLE 595 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8216.1.1 >prot_C-tenellus_contig8216.1.1 ID=prot_C-tenellus_contig8216.1.1|Name=mRNA_C-tenellus_contig8216.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=217bp MVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRAback to top mRNA from alignment at C-tenellus_contig8216:540..4941+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8216.1.1 ID=mRNA_C-tenellus_contig8216.1.1|Name=mRNA_C-tenellus_contig8216.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4402bp|location=Sequence derived from alignment at C-tenellus_contig8216:540..4941+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8216:540..4941+ >mRNA_C-tenellus_contig8216.1.1 ID=mRNA_C-tenellus_contig8216.1.1|Name=mRNA_C-tenellus_contig8216.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=651bp|location=Sequence derived from alignment at C-tenellus_contig8216:540..4941+ (Choristocarpus tenellus KU2346)back to top |