prot_C-tenellus_contig8216.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8216.1.1
Unique Nameprot_C-tenellus_contig8216.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length217
Homology
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: D7FJ53_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ53_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 3.170e-61
Identity = 111/196 (56.63%), Postives = 147/196 (75.00%), Query Frame = 0
Query:    3 NVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEEAVFEQA 198
            NV NYL EQ V   + +S+R+HM +V   RSA NE+ IL R+ P L+ RVL+ VH DA+ IIP+ K++PP FV+AIL++LRP+ Y QGEVV+++   SQGVYFV +GIAEAYV+V   G A   EEKV  IV TG+FFGYTRF+A+ L +D+A++AFT L VYLLSNSSI ++L +HP L + LR+ LE A+F+QA
Sbjct:  873 NVENYLEEQKVGAHLGDSVRTHMMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPVLKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVT--GGAGTEEEKVKGIVSTGKFFGYTRFLASFLEEDMAVKAFTQLYVYLLSNSSIRYLLQYHPFLAEELRMGLEAAIFQQA 1066          
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A6H5L5H5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H5_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.990e-58
Identity = 102/174 (58.62%), Postives = 133/174 (76.44%), Query Frame = 0
Query:   25 MAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEEAVFEQA 198
            M +V   RSA NE+ IL R+ P L+ RVL+ VH DA+ IIPI K++PP FV+AIL++LRP+ Y QGEVV+++   SQGVYFV +GIAEAYV+V   G A   EEKV  IV TG+FFGYTRF+A+ L +D+A++AFT L VYLLSNSSI ++L +HP L + LR+ LEEA+F+QA
Sbjct:    1 MMFVTGARSAWNEDHILSRLPPRLQERVLEHVHRDAVLIIPILKTRPPSFVSAILKNLRPRQYSQGEVVFQSLHMSQGVYFVTKGIAEAYVRVT--GGAGSEEEKVKGIVSTGKFFGYTRFLASFLEEDMAVKAFTQLYVYLLSNSSIRYLLQYHPFLAEELRMGLEEAIFQQA 172          
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A7S3URQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URQ1_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 1.820e-11
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 0
Query:   45 APNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVK----------------------VPVVGQADET-EEKVVAIVPTGRFFGYTRFMAA 148
            A  LR  VL Q+H+D I  I +F ++   F+  +LQ++ P  + +G+ VY     SQG+Y V+RG+AE YV+                             +ET ++K+++IVP G+ FGY  F+ A
Sbjct:    4 AARLRQEVLLQIHEDHIPKIVLFNNKDASFIAKVLQYMVPVKFSEGDEVYGPDEGSQGLYCVVRGVAEVYVEERPRRIFGHHGSSGSVXXXXXXXXXXXXXNETVQQKLLSIVPEGKLFGYVDFLLA 130          
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A7S1CDH6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.580e-10
Identity = 48/192 (25.00%), Postives = 89/192 (46.35%), Query Frame = 0
Query:    1 MVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEE 192
            M  V  YL ++     +   +R +  Y ++ RS  +E  IL  ++ NLR++V+ Q + D I  I   + Q  GFVTA++Q ++P   + GE +       + +YF++RG  E    +    + D+T    + +   G +FG    ++ ++R   A  A  H   + L+   +   +   P   + L  A +E
Sbjct:  424 MDEVKEYLRDRRFPVPLAKRVRKYFEYYMDRRSIFDENVILSELSNNLRSQVVMQSNHDTISRIHFLREQDKGFVTAVMQRIKPMFVVAGERIMMEGDVGKEMYFLLRGTVEISCNLRENVKHDDT----IGLFTEGHYFGEDALLSGNVRPYNAT-AVGHCDTFSLAKEDLEMSIFHFPDSRRVLEEAAKE 610          
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A250WRH6_9CHLO (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRH6_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 4.960e-9
Identity = 33/106 (31.13%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    7 YLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAE 112
            +L E+G+  ++   IR +  YV       +E+DI++ +   LR+RVL  ++ D I+ +P FK Q P  +  ++ ++R + YM+G++V       QG+YF+  G  E
Sbjct:  490 FLKERGIPKKLATRIRKYFHYVSMREVRADEKDIVEELPVKLRSRVLYHMYKDTIEKVPGFKDQHPDLLAMVVNNIRLEYYMKGDIVSCQGDPPQGMYFIGEGKLE 595          
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Match: A0A7S1TYD3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYD3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.230e-5
Identity = 44/184 (23.91%), Postives = 79/184 (42.93%), Query Frame = 0
Query:    1 MVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRARVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRSQGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHLRDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGK 184
            ++ V +YL EQG    +  ++R  +   L  R+A +E+ +L  M   LR +VL   +   I  + +F+ Q   F+  ++  L       G   +  S  S G YF+  GI E           ++ + K+  I+     FG+    +    D    RAFT++   +L ++ +  +     HL K
Sbjct:  877 LMEVQDYLKEQGCGVDLQRAVRVQVQSQLRHRTAMDEDGVLAEMPYGLRRQVLSSAYRGLIPKLGLFRGQEISFIIELVTELSSVFTYTGAYYWLPSVGSDGTYFITDGIVERVTH-------EDNKIKIKGILDRSGMFGHEWLNSEP--DIYGYRAFTNVTCMVLYDNRLKELTDQRRHLAK 1051          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8216.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJ53_ECTSI3.170e-6156.63Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5L5H5_9PHAE1.990e-5858.62Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3URQ1_HETAK1.820e-1132.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1CDH6_9STRA4.580e-1025.00Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A250WRH6_9CHLO4.960e-931.13Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S1TYD3_9STRA2.230e-523.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 34..213
e-value: 9.2E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR45638CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT Acoord: 1..194
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 66..176
score: 11.514
IPR000595Cyclic nucleotide-binding domainCDDcd00038CAP_EDcoord: 66..186
e-value: 9.03314E-10
score: 52.7134
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 1..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8216contigC-tenellus_contig8216:1559..4941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8216.1.1mRNA_C-tenellus_contig8216.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8216 540..4941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8216.1.1 ID=prot_C-tenellus_contig8216.1.1|Name=mRNA_C-tenellus_contig8216.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=217bp
MVNVNNYLGEQGVTGQMYNSIRSHMAYVLNWRSACNEEDILQRMAPNLRA
RVLKQVHDDAIKIIPIFKSQPPGFVTAILQHLRPQLYMQGEVVYEASSRS
QGVYFVIRGIAEAYVKVPVVGQADETEEKVVAIVPTGRFFGYTRFMAAHL
RDDLAIRAFTHLQVYLLSNSSICFILHFHPHLGKTLRLALEEAVFEQASE
ETEEEDKKAAARKALYG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like