mRNA_C-tenellus_contig8163.6.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: A0A0J1H124_9GAMM (Uncharacterized protein n=1 Tax=Photobacterium aquae TaxID=1195763 RepID=A0A0J1H124_9GAMM) HSP 1 Score: 63.9 bits (154), Expect = 1.930e-9 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 10 QGPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVDLDDGVRIGGGRLSISMSSTNG 315 Q P ++G D L + +DQGN+G GGP V I+V+PVNDPPVI + P +EDT L +S ++V DVD ++ G +++S+++ NG Sbjct: 3474 QPDPNFNGDDSLQMVSNDQGNTGTGGPLQDSDDVPITVLPVNDPPVI-----SDVPDQTT----EEDTALVISGIAVSDVDFNEAGS--SGVMTVSLTAGNG 3564
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: A0A1Y1R2C4_9GAMM (Uncharacterized protein n=1 Tax=Oceanospirillales bacterium LUC14_002_19_P2 TaxID=1940822 RepID=A0A1Y1R2C4_9GAMM) HSP 1 Score: 55.8 bits (133), Expect = 1.310e-6 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 10 QGPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILA----ALGASR-----PGMRQPVVMDEDTILPL-SFLSVMDV--DLDDGVRIGGGRLSISMSS 306 QG +++G D L+I V DQG+ G T ++AI V+PVNDPPV++ LG S P P+ +DE P SF ++V LDD G+L++S SS Sbjct: 1669 QGNQDYNGPDQLTIVVDDQGHHGDQPAKTDSQTIAIDVLPVNDPPVLVVPGVQTLGTSASLIFSPANGNPITVDEPADKPYPSFTDQVEVALTLDDA----SGQLNLSASS 1775
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: UPI001CA749D7 (Ig-like domain-containing protein n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA749D7) HSP 1 Score: 55.8 bits (133), Expect = 1.310e-6 Identity = 32/95 (33.68%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 31 GKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVDLDDGVRIGGGRLSISMSSTNG 315 G D++++ V+D GN+G+GGP + +++A++V P+N P+I +L + G +EDT + +S +S+ D+D G GG +++S+S+ NG Sbjct: 693 GVDVINLSVTDNGNTGEGGPLSDTATIAVAVSPINQAPII--SLPPTPTG-------NEDTNVFISGISITDID---GF---GGNVTVSLSAVNG 772
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: UPI001F1AC7D4 (Ig-like domain-containing protein n=1 Tax=Methylobacterium sp. C25 TaxID=2721622 RepID=UPI001F1AC7D4) HSP 1 Score: 53.5 bits (127), Expect = 8.430e-6 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 1 Query: 25 WSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVDLDDGVRIGGGRLSISMSSTNG 315 ++G D L+I D GN+G GG + ++AI+VIPVNDPP + PG Q +DEDT L S + + D G L++++SS G Sbjct: 1102 YNGADTLTIVTDDNGNTGAGGAKSDTDTLAITVIPVNDPPA------NTVPGPTQ--ALDEDTSLVFSAAGGNGISVSDP---DDGTLTVTLSSAQG 1187
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: UPI000E6AA3C5 (DUF4347 domain-containing protein n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AA3C5) HSP 1 Score: 53.5 bits (127), Expect = 8.480e-6 Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 19 PEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVD 252 P+ + +L++ V DQGNSG GG + S+VA++V PVND PVI A G + + ED L+ +S DVD Sbjct: 3757 PDSTAALVLTVAVDDQGNSGTGGAKSASSTVALTVTPVNDAPVITAPSG---------ITVTEDVASALTGISFADVD 3825
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: UPI001F11D242 (Ig-like domain-containing protein n=1 Tax=Aeromonas media TaxID=651 RepID=UPI001F11D242) HSP 1 Score: 51.2 bits (121), Expect = 1.760e-5 Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 1 Query: 10 QGPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVD 252 QG +++G+D L++ D+GN+G GG + I V PVND PV P Q + ED LPLS +SV DVD Sbjct: 14 QGEQDFNGQDALTMVTBDRGNTGSGGALXDTDVLPIEVQPVNDAPV------TQVPDAMQ---VKEDGSLPLSGISVKDVD 85
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: UPI0019E56639 (Tandem-95 repeat protein n=1 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=UPI0019E56639) HSP 1 Score: 52.0 bits (123), Expect = 2.910e-5 Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 13 GPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVDLDDGVRIGGGRLSISMSSTNG 315 G ++SG D L+I VSD N+ G PF+ ++AI+V P ND P++ PG + ++E+T L + +SV DVD G L++++SS++G Sbjct: 1045 GDRDFSGSDTLTISVSDSLNNTNGIPFSDTETIAITVTPQNDAPILTV------PGAQ---TVNENTDLRILGISVSDVDAT-------GDLTVNLSSSSG 1129
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Match: A0A5C8UCW7_9HYPH (Tandem-95 repeat protein n=2 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A5C8UCW7_9HYPH) HSP 1 Score: 51.6 bits (122), Expect = 3.980e-5 Identity = 32/102 (31.37%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 10 QGPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVILAALGASRPGMRQPVVMDEDTILPLSFLSVMDVDLDDGVRIGGGRLSISMSSTNG 315 +G ++G D L+I D+GN+G GG + ++A++V+PV DPP A +G EDT L S + V + D + G L++++S+T G Sbjct: 869 RGMANYNGADTLTITTDDKGNTGTGGAKSDTDTIALTVVPVADPPRHTAPVGTQS--------ATEDTTLVFSSTNGNAVSVTD---VDGSGLTVTLSTTQG 959 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8163.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8163.6.1 >prot_C-tenellus_contig8163.6.1 ID=prot_C-tenellus_contig8163.6.1|Name=mRNA_C-tenellus_contig8163.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=117bp MLMQGPPEWSGKDLLSIFVSDQGNSGQGGPFTVQSSVAISVIPVNDPPVIback to top mRNA from alignment at C-tenellus_contig8163:6041..6391+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8163.6.1 ID=mRNA_C-tenellus_contig8163.6.1|Name=mRNA_C-tenellus_contig8163.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=351bp|location=Sequence derived from alignment at C-tenellus_contig8163:6041..6391+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8163:6041..6391+ >mRNA_C-tenellus_contig8163.6.1 ID=mRNA_C-tenellus_contig8163.6.1|Name=mRNA_C-tenellus_contig8163.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=351bp|location=Sequence derived from alignment at C-tenellus_contig8163:6041..6391+ (Choristocarpus tenellus KU2346)back to top |