mRNA_C-tenellus_contig8090.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig8090.1.1
Unique NamemRNA_C-tenellus_contig8090.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A6H5LDU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDU4_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.570e-84
Identity = 220/537 (40.97%), Postives = 270/537 (50.28%), Query Frame = 1 
Query:  286 PPRSLALDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLDSMKPVRTTSKSNPTAVAAANAISPKTRRSTAQAAVNVGIVPLEDTSVSGEG-------------------------------------STGRSQALEGTTTRRQVSRSPSPTKHGPHSVYDDSAPHPEGSPS---NSWDRDSQEGGYGQYDLMDQSPTSSTSSHDDISSGPMGYTGGG--------------GDIHARGTCRFTTCAYNVSSEYGHEDSTDFNYQQYHTHXXXXXXXXXXXGGRGFRHSQQQSCSKGKHQPSKRHGAPDYRQ----GVPNTDGMG---PYPTSSQTKSFSTGCMLGSSAPTRRSRSG---PLHNQPRPIPESSEISDQDAGGLLLDFFRSVHEKVQTASEEMENKDEVPTRERTSMELPPA--HPMLATKRGIRSISSPALTQFAQYAENLPRLEAPAFKRRRSVESLL 1698
            P  +  LDP+ PVRKGKWTPEEE YTT+IINDF +GLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGA+CIGKRVF   ERTPENL E+ RSRREL++MARKFH RL+SM+P  + + S+                                                                            S GR        T    SRSPSP  HGPHS  DDSAPHPEGSP    +SW+ +    GYG YD MDQSP+ + +  D   S P   +  G              G+ H  G   +++C Y+ S   G E     N +                GG      +    S G+  P  R            G+ +  G G   P PT +  ++     +  ++     S SG   P    PR IPE SEISDQDAGGLL+DFF+SVH+KV+TAS+E+  +        +  E      HP++A+KRG RSISSPALTQFA YAE LPRL+ P FKRR+SV S +
Sbjct:  122 PLETSQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLESMRPGASRTSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGR--------TXXXSSRSPSPGAHGPHSACDDSAPHPEGSPGGRPSSWEEE----GYGHYDPMDQSPSGADTDGDSNDSPPHTASFAGRXXXXXXXXXXXXXGEGHTMG---YSSCRYDGSGG-GREGLGQDNAE----------------GG-----GEXXXASSGRMSPLGRXXXXXXXXXTWGGLGSPSGAGFAAPSPTGAP-RTLPPAALAAAAVIREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQXXXXXPASPEETGKGAMHPLMASKRGFRSISSPALTQFANYAEQLPRLQTPPFKRRKSVASFV 620
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.980e-54
Identity = 159/467 (34.05%), Postives = 184/467 (39.40%), Query Frame = 1 
Query:  304 LDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLDSMKPVRTTSKSNPTAVAAANAISPKTRRSTAQAAVNVGIVPLEDTSVSGEGSTGRSQALEGTTTRRQVSRSPSPTKHGPHSVYDDSAPHPEGSPSNSWDRDSQEGGYGQYDLMDQSPTSSTSSHDDISSGPMGYTGGGGDIHARGTCRFTTCAYNVSSEYGHEDSTDFNYQQYHTHXXXXXXXXXXXGGRGFRHSQQQSCSKGKHQPSKRHGAPDYRQGVPNTDGMGPYPTSSQTKSFSTGCMLGSSAPTRRSRSGPLHNQPRPIPESSEISDQDAGGLLLDFFRSVHEKVQTASEEMENKDEVPTRERTSMELPPA--HPMLATKRGIRSISSPALTQFAQYAENLPRLEAPAFKRRRSVESLL 1698
            LDP+ PVRKGKWTPEEE YTT+IINDF +GLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGA+CIGKRVF   ERTPENL E+ RSRREL++MARKFH RL+SM+                                             G GS  RS                 PT                      W                                                                                                                                                              PL   PR IPE SEISDQDAGGLL+DFF+SVH+KV+TAS+E+  + +   +  +         HP++A+KRG RSISSPALTQFA YAE LPRL+ P FKRR+SV S +
Sbjct:  247 LDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLESME---------------------------------------------GSGSGARS-----------------PT----------------------W--------------------------------------------------------------------------------------------------------------------------------------------------------------PL---PRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDATGKGGMHPLMASKRGFRSISSPALTQFAHYAEQLPRLQTPPFKRRKSVASFV 468
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A7S1XJQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.700e-32
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 1 
Query:  322 VRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLDSMKPVR 627
            +RKGKWT EEE YT R+I+DF  GLL +A GTTLRSYLSEKLNCDPMRITKK+AG++CIGKR+F   ERTPEN+   ++S +EL D+   F A+L+S +  R
Sbjct:   26 LRKGKWTAEEEAYTERVIHDFNEGLLQVAAGTTLRSYLSEKLNCDPMRITKKYAGSSCIGKRIFAPCERTPENIERGRQSAKELADLEAAFRAKLESSRSSR 127
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A835YQC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.850e-31
Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 1 
Query:  322 VRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELD 576
            VRKGKWTPEEE YT+RII DF  G LPL PGTTLR+YLS+KL+CDPMRITKKFAGAACIGKRVF   E+TP+N++    S+R+ D
Sbjct:  144 VRKGKWTPEEEAYTSRIIRDFNNGYLPLPPGTTLRTYLSDKLSCDPMRITKKFAGAACIGKRVFAPCEKTPDNMAMVTASKRDCD 228
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A4D9DAS8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAS8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.530e-28
Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1 
Query:  274 VAPPPPRSLALDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKF 594
             A P     +  P+ P+R+GKWT +EE Y +RII DF  GLLPLA GTTLR+YLS+ LNCDPMRITKKFAGAACIGKRVFQ  +  PE L   +R++ EL+ + ++F
Sbjct:  140 AAAPSATGTSGGPRPPLRRGKWTFQEEAYVSRIIYDFNHGLLPLAAGTTLRAYLSDTLNCDPMRITKKFAGAACIGKRVFQPCDSHPETLERRRRAQAELEVLRKEF 246
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A836CGH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGH4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.620e-28
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 1 
Query:  322 VRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAA-------------CIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLDSMK 618
            VRKGKWTPEEE +T+RII DF  G LPL PGTTLR+YLS+KLNCDPMRI K FAGAA             CIGKRVF   ERTPENL+    S+R+L D+  +F  R++ +K
Sbjct:   42 VRKGKWTPEEEAFTSRIIRDFNNGYLPLPPGTTLRTYLSDKLNCDPMRIAKNFAGAAXXXXXXXXXXXXACIGKRVFAPCERTPENLAMVLASKRDLADLEERFQQRMNGIK 153
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A836CQN8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQN8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.230e-27
Identity = 53/96 (55.21%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:  322 VRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLD 609
            +R+GKW+PEEE YT RII+ F  G+L L  GTTLR +L+EKL CDPMRITKKF G+AC+GKRV+ + ERTP   +E Q S+ +L ++ ++F ++L+
Sbjct:   17 LRRGKWSPEEEAYTARIIHYFNTGVLQLPEGTTLRVFLAEKLRCDPMRITKKFTGSACLGKRVYHSCERTPATKAEIQESKEDLANLEQRFLSQLE 112
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A8J2SN29_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN29_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.390e-27
Identity = 64/105 (60.95%), Postives = 75/105 (71.43%), Query Frame = 1 
Query:  292 RSLALDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARL 606
            R  A   K P+RKGKWT EEE +T  +I +F RG+L    GTTLRSYLSEKL+CDPMRITKKFAG A IGKRVF   ++TPE   E++R R EL DM R+F A L
Sbjct:  139 RVAAQREKAPLRKGKWTQEEELFTAAVIREFERGMLACPAGTTLRSYLSEKLHCDPMRITKKFAGDASIGKRVFTPCKQTPELQEEARRVRAELRDMERRFAAHL 243
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BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A1Z5J646_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J646_FISSO)

HSP 1 Score: 129 bits (323), Expect = 1.790e-27
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:  271 LVAPPPPRSLALDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLD 609
            L  P   + ++   +  +RKGKWTPEEE+YT+RII+ F+ GLL L  G TLRSYL+EKLNCDPMRITKK+AGAAC+G+R +Q  E  P  + E Q +R +LDD+  +F  R++
Sbjct:   79 LKLPKKKKGISAKERSMLRKGKWTPEEEEYTSRIIHYFSTGLLILPEGHTLRSYLAEKLNCDPMRITKKYAGAACLGRRAYQYREHAPPTIGEIQLARTQLDDLEHRFRMRVE 191
[Close]
BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Match: A0A1Z5K1V9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V9_FISSO)

HSP 1 Score: 129 bits (323), Expect = 2.230e-27
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:  271 LVAPPPPRSLALDPKGPVRKGKWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLD 609
            L  P   + ++   +  +RKGKWTPEEE+YT+RII+ F+ GLL L  G TLRSYL+EKLNCDPMRITKK+AGAAC+G+R +Q  E  P  + E Q +R +LDD+  +F  R++
Sbjct:  116 LKLPKKKKGISAKERSMLRKGKWTPEEEEYTSRIIHYFSTGLLILPEGYTLRSYLAEKLNCDPMRITKKYAGAACLGRRAYQYREHAPPTIGEIQLARTQLDDLEHRFRMRVE 228
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8090.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDU4_9PHAE1.570e-8440.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI3.980e-5434.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XJQ1_9STRA4.700e-3262.75Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YQC6_9STRA2.850e-3171.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DAS8_9STRA4.530e-2857.94Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CGH4_9STRA4.620e-2858.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQN8_9STRA1.230e-2755.21Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A8J2SN29_9STRA1.390e-2760.95Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5J646_FISSO1.790e-2753.10Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5K1V9_FISSO2.230e-2753.10Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8090contigC-tenellus_contig8090:91..3080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR84
Preferred nameDCAF7
PFAMsWD40
Model size2264
Max annot lvl2759|Eukaryota
KEGG koko:K11805
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0007346,GO:0007399,GO:0007517,GO:0008150,GO:0008152,GO:0008361,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010564,GO:0010646,GO:0010648,GO:0010769,GO:0010975,GO:0016043,GO:0016363,GO:0016604,GO:0017016,GO:0017048,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023057,GO:0030100,GO:0030154,GO:0030274,GO:0030334,GO:0030336,GO:0030516,GO:0031267,GO:0031323,GO:0031326,GO:0031344,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032991,GO:0033262,GO:0034399,GO:0035330,GO:0035331,GO:0036211,GO:0040008,GO:0040012,GO:0040013,GO:0042692,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045445,GO:0045595,GO:0045664,GO:0045806,GO:0045927,GO:0048365,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048627,GO:0048638,GO:0048699,GO:0048731,GO:0048747,GO:0048856,GO:0048869,GO:0050764,GO:0050765,GO:0050767,GO:0050770,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051052,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051239,GO:0051270,GO:0051271,GO:0051336,GO:0051726,GO:0051960,GO:0055001,GO:0055002,GO:0060099,GO:0060101,GO:0060255,GO:0060284,GO:0060627,GO:0061061,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0090329,GO:0120035,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1903463,GO:1905153,GO:1905154,GO:1990234,GO:2000026,GO:2000112,GO:2000145,GO:2000146
Exons3
Evalue2.63e-56
EggNOG OGsKOG0290@1|root,KOG0290@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-06_003520.3
Descriptionepidermal cell fate specification
Cds size1689
COG categoryM
BRITEko00000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790079.4939432-UTR-C-tenellus_contig8090:90..6321680790079.4939432-UTR-C-tenellus_contig8090:90..632Choristocarpus tenellus KU2346UTRC-tenellus_contig8090 91..632 -
1680790079.5452323-UTR-C-tenellus_contig8090:3047..30801680790079.5452323-UTR-C-tenellus_contig8090:3047..3080Choristocarpus tenellus KU2346UTRC-tenellus_contig8090 3048..3080 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790079.5114315-CDS-C-tenellus_contig8090:632..8421680790079.5114315-CDS-C-tenellus_contig8090:632..842Choristocarpus tenellus KU2346CDSC-tenellus_contig8090 633..842 -
1680790079.5228164-CDS-C-tenellus_contig8090:1210..22701680790079.5228164-CDS-C-tenellus_contig8090:1210..2270Choristocarpus tenellus KU2346CDSC-tenellus_contig8090 1211..2270 -
1680790079.5338602-CDS-C-tenellus_contig8090:2628..30471680790079.5338602-CDS-C-tenellus_contig8090:2628..3047Choristocarpus tenellus KU2346CDSC-tenellus_contig8090 2629..3047 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8090.1.1prot_C-tenellus_contig8090.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig8090 633..3047 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig8090.1.1

>prot_C-tenellus_contig8090.1.1 ID=prot_C-tenellus_contig8090.1.1|Name=mRNA_C-tenellus_contig8090.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=563bp
MSPALSVHQNQEVVSEFFQRGTPTFGSYGPGDVGVPEDDNGCSRSAGNSV
DTGVKPAAMKEDNCNMESSSDSWRVEDEPLVAPPPPRSLALDPKGPVRKG
KWTPEEEKYTTRIINDFTRGLLPLAPGTTLRSYLSEKLNCDPMRITKKFA
GAACIGKRVFQTAERTPENLSESQRSRRELDDMARKFHARLDSMKPVRTT
SKSNPTAVAAANAISPKTRRSTAQAAVNVGIVPLEDTSVSGEGSTGRSQA
LEGTTTRRQVSRSPSPTKHGPHSVYDDSAPHPEGSPSNSWDRDSQEGGYG
QYDLMDQSPTSSTSSHDDISSGPMGYTGGGGDIHARGTCRFTTCAYNVSS
EYGHEDSTDFNYQQYHTHRNHHSHAVHSRGGRGFRHSQQQSCSKGKHQPS
KRHGAPDYRQGVPNTDGMGPYPTSSQTKSFSTGCMLGSSAPTRRSRSGPL
HNQPRPIPESSEISDQDAGGLLLDFFRSVHEKVQTASEEMENKDEVPTRE
RTSMELPPAHPMLATKRGIRSISSPALTQFAQYAENLPRLEAPAFKRRRS
VESLLCNSVEMA*
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mRNA from alignment at C-tenellus_contig8090:91..3080-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig8090.1.1 ID=mRNA_C-tenellus_contig8090.1.1|Name=mRNA_C-tenellus_contig8090.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2990bp|location=Sequence derived from alignment at C-tenellus_contig8090:91..3080- (Choristocarpus tenellus KU2346)
GTGGTGCAGTTGGCGTAGGTGCTGATCCCAAGAATGTCGCCAGCACTTTC
TGTCCATCAGAACCAAGAGGTCGTCTCCGAATTTTTTCAGAGGGGAACCC
CAACGTTTGGGTCATACGGTCCTGGCGACGTTGGCGTTCCTGAGGACGAT
AACGGTTGCTCCCGCAGTGCTGGTAATTCAGTAGATACTGGGGTGAAACC
GGCTGCCATGAAGGAGGACAATTGTAACATGGAATCTTCGTCGGATTCAT
GGAGGGTGGAAGACGAGCCATTAGTGGCTCCACCGCCCCCACGTTCTTTA
GCACTCGATCCTAAGGGCCCTGTCAGGAAAGGAAAATGGACCCCAGAGGA
GGAGAAGTACACTACCCGTATCATCAACGACTTCACGAGGGGATTGCTCC
CTCTGGCCCCCGGTACAACCCTCCGATCGTACCTCAGCGAGAAGTTGAAC
TGGTGAGCAACTGATAAAGAACATTTTTCACGGCTAGAGTTGGTAGTTGA
AGTTCTCGCTGCCCAAAGCACAGCATGCTCCAGTGTATGTTTTTCGCTTT
TCATGTGCTAATGGTCACATCTACCGGAGTACTACGTAGTACTTCTGTTC
ATAGGACTTCAACTTTGTTCGTTCTGAAGGAACAACAAAATCCACCCTTC
AATCATGAACAAGTACACCTGAAGTTCTATCACTCTGCGTCAACCCTTCA
CCCGTGATGAATCCTTCTCAAGAGTGCTATCCCATTTCATCTTCTGCCCC
ATTCAACTGACCCTGCAATACAACACGTCATCGCTATCCCATTGTGACCG
TCATCATTAGTGACCCTATGCGCATCACCAAGAAGTTTGCGGGAGCTGCT
TGCATCGGCAAGAGGGTCTTCCAGACAGCAGAGCGAACACCTGAGAATCT
GTCCGAGTCACAACGCAGTCGCCGTGAGCTAGATGACATGGCACGCAAGT
TCCACGCTCGACTGGACAGTATGAAACCAGTACGAACCACGTCCAAATCT
AACCCTACTGCAGTGGCCGCCGCCAACGCCATTAGCCCTAAAACGCGACG
TTCTACGGCGCAGGCAGCAGTCAATGTGGGTATAGTACCTCTTGAAGATA
CGTCGGTTAGTGGGGAGGGGTCGACAGGGAGGTCCCAGGCACTTGAGGGG
ACAACAACGAGGCGTCAAGTGTCAAGATCCCCATCTCCAACAAAACATGG
CCCACACTCCGTCTACGATGACTCTGCACCGCATCCAGAGGGCTCTCCTT
CCAATTCCTGGGACCGTGATAGTCAAGAGGGGGGTTATGGGCAATACGAT
CTCATGGATCAGAGCCCTACATCAAGCACTTCCTCGCATGATGACATAAG
CTCAGGCCCCATGGGCTACACAGGGGGCGGGGGGGACATACATGCCCGAG
GCACTTGTCGCTTCACTACCTGTGCATACAATGTGTCATCAGAGTATGGG
CATGAAGATTCAACTGACTTCAATTACCAACAGTATCACACCCACCGCAA
CCACCACTCTCACGCCGTTCACTCTAGAGGCGGTAGGGGGTTCAGGCACT
CTCAACAACAATCTTGTAGCAAGGGGAAACACCAGCCTTCCAAACGTCAC
GGGGCACCAGATTACCGTCAAGGTGTGCCGAATACTGATGGAATGGGACC
ATACCCTACCTCATCACAGACAAAATCTTTCTCCACTGGATGTATGTTGG
GCTCCTCTGCACCAACAAGGCGTAGTAGGTCTGGGCCCCTTCACAATCAG
CCACGACCAATCCCTGAAAGTTCTGAAATATCGGATCAGGACGCGGGGGG
TTTGCTGTTGGATTTCTTCCGCTCGGTGCATGAAAAGGTTCAAACTGCTT
CAGAAGAGATGGAAAATAAGGTGCGATATTGGAGTTGCTGCTTCTACATG
TTGAGCATGATTATGTATTAGCTCCAACTTAAATAAGAAGACGAAAGGCT
ATGCAGGAGCTCTGTATGAAATTTATTGTGGTAATTTCTGGTGTCTTGTT
TGCCAGAAAAATTTACCACTCAAAATGTGACCAATAAATACGTATCAAGG
TGTGCTTCCTTTGTGCAGTTTTCCAGTATAGAAATATTTTGGTATTTTTT
GTGAGCATGAGAATGCAAATGTGATACATCTTGGAGAAGTACATATCAAG
ACTGGGGCCATTTTGTATGTTTGTTTTGTATACTATTTAATAATCATCTG
CCTACTTCTGCCACTTGCTGCAATACTTGGTTGTGCAGGATGAGGTGCCA
ACGAGGGAGAGGACATCTATGGAGCTCCCACCTGCCCACCCAATGCTTGC
CACAAAACGAGGAATCAGATCTATTTCTTCCCCTGCACTCACTCAGTTTG
CTCAATACGCTGAGAATCTCCCCAGGCTAGAGGCTCCTGCTTTCAAGCGG
AGGAGGAGTGTAGAGAGTCTTCTGTGCAATAGTGTAGAAATGGCGTGAGG
CAGCTTTGTGTTAGCGGTTGGTGATCACAGTGGGAGGGGGATGGAGAATA
GAGGATGGAGGTGTGGTGGACTTTAAGGTGAATGCTCTTGATGAGGTTCC
ATTGAAGAAAAAACCTTGATATCTGGTCTGGTCTGGTCTGGTCTGTTCCA
GTAGTCGTGACAGTGTTGGTGTGGTATGTGTATGGGTTTTGGAATGTTGG
GATCTCTGTGAATTCTATGAATGGGAAGAATGGGGATAGGAAAGGGAGAT
GGAGATCGGTGGAAGTGGCACTGCCGTCATGTTCTTGCCAGAACAGAGGG
AAAACAGGACGGCGCACCTCGCCATCCATTGTTGTCAGGGAATACATCCA
TTGTTGTCAGGGAATACATCTACCTGTTTCTGCTGTGATGCTTGAGTGGC
AGGATTCTTGCTGGTTCTGTAGTGGTTTCACCTGTGCAAACCTACCTGTG
GTATATGTAAAGATTTTCTTTTGGGTGTGAGGGTGTCTCTCGTTATCTTC
CCTGGCCCTAACAGGGCGTGTGTTTAGGGGTGTGATTGGG
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Coding sequence (CDS) from alignment at C-tenellus_contig8090:91..3080-

>mRNA_C-tenellus_contig8090.1.1 ID=mRNA_C-tenellus_contig8090.1.1|Name=mRNA_C-tenellus_contig8090.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1689bp|location=Sequence derived from alignment at C-tenellus_contig8090:91..3080- (Choristocarpus tenellus KU2346)
ATGTCGCCAGCACTTTCTGTCCATCAGAACCAAGAGGTCGTCTCCGAATT
TTTTCAGAGGGGAACCCCAACGTTTGGGTCATACGGTCCTGGCGACGTTG
GCGTTCCTGAGGACGATAACGGTTGCTCCCGCAGTGCTGGTAATTCAGTA
GATACTGGGGTGAAACCGGCTGCCATGAAGGAGGACAATTGTAACATGGA
ATCTTCGTCGGATTCATGGAGGGTGGAAGACGAGCCATTAGTGGCTCCAC
CGCCCCCACGTTCTTTAGCACTCGATCCTAAGGGCCCTGTCAGGAAAGGA
AAATGGACCCCAGAGGAGGAGAAGTACACTACCCGTATCATCAACGACTT
CACGAGGGGATTGCTCCCTCTGGCCCCCGGTACAACCCTCCGATCGTACC
TCAGCGAGAAGTTGAACTGTGACCCTATGCGCATCACCAAGAAGTTTGCG
GGAGCTGCTTGCATCGGCAAGAGGGTCTTCCAGACAGCAGAGCGAACACC
TGAGAATCTGTCCGAGTCACAACGCAGTCGCCGTGAGCTAGATGACATGG
CACGCAAGTTCCACGCTCGACTGGACAGTATGAAACCAGTACGAACCACG
TCCAAATCTAACCCTACTGCAGTGGCCGCCGCCAACGCCATTAGCCCTAA
AACGCGACGTTCTACGGCGCAGGCAGCAGTCAATGTGGGTATAGTACCTC
TTGAAGATACGTCGGTTAGTGGGGAGGGGTCGACAGGGAGGTCCCAGGCA
CTTGAGGGGACAACAACGAGGCGTCAAGTGTCAAGATCCCCATCTCCAAC
AAAACATGGCCCACACTCCGTCTACGATGACTCTGCACCGCATCCAGAGG
GCTCTCCTTCCAATTCCTGGGACCGTGATAGTCAAGAGGGGGGTTATGGG
CAATACGATCTCATGGATCAGAGCCCTACATCAAGCACTTCCTCGCATGA
TGACATAAGCTCAGGCCCCATGGGCTACACAGGGGGCGGGGGGGACATAC
ATGCCCGAGGCACTTGTCGCTTCACTACCTGTGCATACAATGTGTCATCA
GAGTATGGGCATGAAGATTCAACTGACTTCAATTACCAACAGTATCACAC
CCACCGCAACCACCACTCTCACGCCGTTCACTCTAGAGGCGGTAGGGGGT
TCAGGCACTCTCAACAACAATCTTGTAGCAAGGGGAAACACCAGCCTTCC
AAACGTCACGGGGCACCAGATTACCGTCAAGGTGTGCCGAATACTGATGG
AATGGGACCATACCCTACCTCATCACAGACAAAATCTTTCTCCACTGGAT
GTATGTTGGGCTCCTCTGCACCAACAAGGCGTAGTAGGTCTGGGCCCCTT
CACAATCAGCCACGACCAATCCCTGAAAGTTCTGAAATATCGGATCAGGA
CGCGGGGGGTTTGCTGTTGGATTTCTTCCGCTCGGTGCATGAAAAGGTTC
AAACTGCTTCAGAAGAGATGGAAAATAAGGATGAGGTGCCAACGAGGGAG
AGGACATCTATGGAGCTCCCACCTGCCCACCCAATGCTTGCCACAAAACG
AGGAATCAGATCTATTTCTTCCCCTGCACTCACTCAGTTTGCTCAATACG
CTGAGAATCTCCCCAGGCTAGAGGCTCCTGCTTTCAAGCGGAGGAGGAGT
GTAGAGAGTCTTCTGTGCAATAGTGTAGAAATGGCGTGA
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