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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1381 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Ec32 ortholog | Ec-27_002300.2 |
| Cds size | 1110 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790077.176511-UTR-C-tenellus_contig8046:3570..3650 | 1680790077.176511-UTR-C-tenellus_contig8046:3570..3650 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig8046 3571..3650 + |
| 1680790077.235734-UTR-C-tenellus_contig8046:6252..6443 | 1680790077.235734-UTR-C-tenellus_contig8046:6252..6443 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig8046 6253..6443 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790077.1886384-CDS-C-tenellus_contig8046:3650..3775 | 1680790077.1886384-CDS-C-tenellus_contig8046:3650..3775 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig8046 3651..3775 + |
| 1680790077.2015116-CDS-C-tenellus_contig8046:4270..4802 | 1680790077.2015116-CDS-C-tenellus_contig8046:4270..4802 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig8046 4271..4802 + |
| 1680790077.2159061-CDS-C-tenellus_contig8046:5055..5179 | 1680790077.2159061-CDS-C-tenellus_contig8046:5055..5179 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig8046 5056..5179 + |
| 1680790077.2256112-CDS-C-tenellus_contig8046:5923..6252 | 1680790077.2256112-CDS-C-tenellus_contig8046:5923..6252 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig8046 5924..6252 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8046.2.1 >prot_C-tenellus_contig8046.2.1 ID=prot_C-tenellus_contig8046.2.1|Name=mRNA_C-tenellus_contig8046.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=370bp
MEGGSGGNIGGDGRPEQHTHTIINSIASEGPLRSISSPPFGGPVDFRNTG
PLAHTNAAHHAPTGHPTHSSGMSAPQTTLNQSMVHSVTPVATNSPTTGRQ
ACPLPISPPHQPQPSDAHAPASIAPPAVEPAFSQPAVYAQPSPEKGPFAG
NQPPPTELLAPRMTTTDPLGLGSNSHVVQNAPPWSSAASVGAGVEVSSAL
NGPSASMPRSGVSLGGGVESSMPSMMVRPPPPPIPVAPPVTQEPQQLPMP
ALPPPPPGASPPFPVAALIPEPVTKDILTPKRDTLDDLVDDFLAPSTAIP
PGPLELKVELGLLGAGGGWVEDLRRLAKLRAWDVFVSTTEGIMEAYAQGR
AGEMSPSQVRKADAVKIKE* back to topmRNA from alignment at C-tenellus_contig8046:3571..6443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig8046.2.1 ID=mRNA_C-tenellus_contig8046.2.1|Name=mRNA_C-tenellus_contig8046.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2873bp|location=Sequence derived from alignment at C-tenellus_contig8046:3571..6443+ (Choristocarpus tenellus KU2346)
TGTATCGTAGGTTCCTGAGAGGGGTGTGTGTTGTGGATGAAATAAGTAGA
ACGGATTGGGAAAGGCAACGATTTGGAGCCATGGAGGGAGGAAGCGGGGG
AAACATTGGAGGTGATGGAAGGCCGGAGCAGCACACTCATACTATCATCA
ACAGCATCGCTTCTGAAGGCCCTCTCCGTAGTATTTCCAGCCCACCCTTT
GGAGGGTGAGTTTTTGTACTCAAGTAGTAGCACCTGTTCAGATTGAATGC
TCCAAGTCAATACTTCCACAATGATGGATGAGACGACCTTCTGCAATCAA
ATTATAATTTCGATCGCCGACCTGGATGATGGCCTCTAAGTCCCCTCCTG
ATAATGACGAAGAAAACTGGCACAACTTCCTCTCTGCACTACATCCTGTT
GCCCTAGATGTGTGATGGAGTCATCATTCGAAGAGAAAAAAGGATGTAGA
GTATCTTCCGTCAGTTTTCGTATTAGAAGTACGGCGGGTGTTGGTGACAG
TGACACTTTGCACATTGTTCTCTTAGGTGGATTGTTGAAGAACGATTTTG
CACACAGAACAACGATGCAGACTCCTGCTTTTCGTTATCGTCATCTGCAT
GGTGAATGTATGCAATCGCATTTGGGAACAGTCAATGGAAATTTCGCCCC
CCACCCTGTTGCCTTCACACCATTGTGCCATTGAACACGTTCCCACACAG
GCCTGTAGACTTCAGGAACACTGGCCCCCTCGCCCATACCAATGCGGCAC
ATCACGCTCCAACAGGTCATCCTACGCATTCCTCCGGCATGAGCGCCCCC
CAGACCACATTGAATCAATCAATGGTGCATTCCGTGACCCCGGTCGCCAC
CAACTCACCCACCACTGGAAGGCAGGCTTGCCCACTACCGATTAGCCCAC
CTCACCAGCCACAACCGTCAGATGCACACGCCCCTGCCTCAATTGCGCCC
CCTGCTGTAGAACCTGCCTTCTCCCAGCCAGCAGTGTATGCGCAACCCTC
TCCCGAGAAGGGGCCTTTCGCCGGCAATCAACCGCCTCCAACAGAACTGT
TGGCACCAAGAATGACCACTACAGACCCCCTAGGTTTGGGTTCGAATTCT
CACGTGGTGCAAAATGCTCCACCATGGAGCAGTGCTGCTTCAGTTGGGGC
GGGAGTGGAGGTATCTAGCGCGCTTAATGGGCCTAGTGCATCAATGCCCA
GATCCGGGGTGTCACTGGGAGGTGGGGTGGAGGTGAGCACACTTGTAAAC
AAATAGCTCCGAACGAAAAAAGGCGGCTCAGATAGCCCTGACATTATTGG
TATTTCGTGTTCAGGTCACAAGGCCTCTGTGGTGTTAGGGAATACCTTCC
AGCAGCATCATAGAGCCTTCCTTGGTATCTGGATATAACCCTTAATGAGA
ATGTGAAGTAGTGAGTACAAGAGTATCATTGATGCACAATATACTTCAGT
TCTCCTGACGAAACACTCCTTCCCAACTGCCACAGAGCTCAATGCCCTCG
ATGATGGTCCGGCCACCGCCGCCCCCTATACCAGTAGCTCCACCTGTGAC
CCAAGAACCACAGCAGTTGCCAATGCCAGCACTCCCACCCCCACCTCCTG
GAGCATCACGTGAGGATGGAAGGATTGCAATGTTGATGTTGGTACTCTTT
CCCTGTTTTGGTAGCCTTCCGCCTTTGAAGGTGTTTGATTTCTGTGGGTA
ACAAGCATGTCTGAGATAGAAGTCTTCAGTAATGTTTTTCTAAGTGCATG
TTCTTTGTCTACGTGCGATTCCTTTCTGTGATGAGGTTTTGTGAGAGTTG
GATAGACTGTTTAGTTGATATCGGAGAACTGGTGTACTGTTCAAAATTTT
CCTCCCAATTGTTGTTTTGATGCTATTGATTTGAGTGGTGATTCTGAAGA
TGGTTGTGCAGTGTCGAGTGCTGTTTTACACTTCACCACTTGCTTCTCGA
CGATTCCATTCAGCATATTGTGATTGTGGTGTATTGTGGGAGTATGGAAG
GTGCCTCTTCCTACAGTATGAATCAGTGAGGGAAGGCAGATTGTTGAACC
ACCGCCTATGTTGGAATACACACAGTGTAGGAATGATAGAGGGTGAACCA
TTACAATTCTTCCGTGTAGTAGTAAAGATCCCAAGTGAAAATTTTACCCC
ATTTTTCTTAACGAGGTGAAAGAGAACCATTATTATTCTTCCCTTGCTGT
CCAAGAACAGTCTTCCACATGCAAACCGAGCACCAAATAAAAACTCACTA
CTCACTCACTACATTTTCCTCCCCTCCAATTCATCCTCTCATTCCCCGCT
CTGTTTCCCTCCCCCCTCTGCATGTATGTTTTGTTGCTATGTTTGAGTAA
CAGCTCCTTTTCCAGTTGCTGCATTGATCCCAGAACCTGTCACAAAGGAT
ATCCTTACCCCAAAGAGAGACACGTTGGATGATCTTGTTGATGACTTCTT
AGCCCCATCCACTGCCATACCTCCTGGCCCCTTGGAGCTGAAAGTGGAAC
TGGGGCTGTTGGGGGCTGGAGGGGGTTGGGTGGAAGACCTTCGGCGACTA
GCTAAACTACGGGCTTGGGATGTGTTTGTTTCAACCACTGAGGGCATCAT
GGAGGCGTATGCACAGGGCAGGGCAGGAGAGATGTCGCCTTCCCAGGTGA
GAAAAGCTGATGCCGTTAAGATTAAGGAATGAGTGTATCAATCAACATAT
TTTAAGGGGGCAGAACCGAGAAGGCGAGCAAAGCAGATTGTGACTAACTA
GGTGCTGTCTTGGGTGCAGGGAAAGAGGGCGGAGAAGTAAGGGTGACGAC
AAGTTAAGCTTGTGTTTGCAGCAAGGCATCCATGAGCGTGAGTGTCCTTC
ACCAGCAAGAGAGTTGTCCTGGG back to topCoding sequence (CDS) from alignment at C-tenellus_contig8046:3571..6443+ >mRNA_C-tenellus_contig8046.2.1 ID=mRNA_C-tenellus_contig8046.2.1|Name=mRNA_C-tenellus_contig8046.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1110bp|location=Sequence derived from alignment at C-tenellus_contig8046:3571..6443+ (Choristocarpus tenellus KU2346)
ATGGAGGGAGGAAGCGGGGGAAACATTGGAGGTGATGGAAGGCCGGAGCA
GCACACTCATACTATCATCAACAGCATCGCTTCTGAAGGCCCTCTCCGTA
GTATTTCCAGCCCACCCTTTGGAGGGCCTGTAGACTTCAGGAACACTGGC
CCCCTCGCCCATACCAATGCGGCACATCACGCTCCAACAGGTCATCCTAC
GCATTCCTCCGGCATGAGCGCCCCCCAGACCACATTGAATCAATCAATGG
TGCATTCCGTGACCCCGGTCGCCACCAACTCACCCACCACTGGAAGGCAG
GCTTGCCCACTACCGATTAGCCCACCTCACCAGCCACAACCGTCAGATGC
ACACGCCCCTGCCTCAATTGCGCCCCCTGCTGTAGAACCTGCCTTCTCCC
AGCCAGCAGTGTATGCGCAACCCTCTCCCGAGAAGGGGCCTTTCGCCGGC
AATCAACCGCCTCCAACAGAACTGTTGGCACCAAGAATGACCACTACAGA
CCCCCTAGGTTTGGGTTCGAATTCTCACGTGGTGCAAAATGCTCCACCAT
GGAGCAGTGCTGCTTCAGTTGGGGCGGGAGTGGAGGTATCTAGCGCGCTT
AATGGGCCTAGTGCATCAATGCCCAGATCCGGGGTGTCACTGGGAGGTGG
GGTGGAGAGCTCAATGCCCTCGATGATGGTCCGGCCACCGCCGCCCCCTA
TACCAGTAGCTCCACCTGTGACCCAAGAACCACAGCAGTTGCCAATGCCA
GCACTCCCACCCCCACCTCCTGGAGCATCACCTCCTTTTCCAGTTGCTGC
ATTGATCCCAGAACCTGTCACAAAGGATATCCTTACCCCAAAGAGAGACA
CGTTGGATGATCTTGTTGATGACTTCTTAGCCCCATCCACTGCCATACCT
CCTGGCCCCTTGGAGCTGAAAGTGGAACTGGGGCTGTTGGGGGCTGGAGG
GGGTTGGGTGGAAGACCTTCGGCGACTAGCTAAACTACGGGCTTGGGATG
TGTTTGTTTCAACCACTGAGGGCATCATGGAGGCGTATGCACAGGGCAGG
GCAGGAGAGATGTCGCCTTCCCAGGTGAGAAAAGCTGATGCCGTTAAGAT
TAAGGAATGA back to top
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