mRNA_C-tenellus_contig7976.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: D8LCW6_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW6_ECTSI) HSP 1 Score: 155 bits (392), Expect = 9.050e-40 Identity = 88/186 (47.31%), Postives = 114/186 (61.29%), Query Frame = 1 Query: 376 NMDKHSFEEDMKGMAVCAKCLEEGR---SLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASASVVPAPSTLPPETPLLPQRSGDPSPSVDATETYVSVCDGTGVFSVLGMFWK------GGSKAKLCCLTIRLGQGVSASLVVDLPDWMYRTRAAAIKTLTVRTMADFVRVSPQVASAI 906 MD+ FE++M+ +AVC KCL+E + SL CTGCRMVLYC EHQ HW +HK +CK +K GA V S +PP L G + E YVSVCD TGVFS+LGMFWK S ++LC L ++LG+G A L L DW RTR AA+KTLTV+ AD+VRV+ +A+++ Sbjct: 51 TMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAGAFP--VSRDSWVPP----LSSPHGGAGIAKRECEVYVSVCDATGVFSILGMFWKEDEKDRASSSSRLCSLMVQLGKGPVACLESKLQDWEPRTRWAALKTLTVQGSADYVRVTRAMAASL 230
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A482S2J0_9ARCH (Zinc finger MYND domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J0_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 2.970e-7 Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 1 Query: 418 AVCAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASASVVPAPSTLPPET 612 +VCA C +E RS+L+C+ C+ V YCC HQ HW EHKG C+E C A A+ T+ P++ Sbjct: 293 SVCAVCSQE-RSVLRCSRCKAVCYCCAAHQQQHWKEHKGVCREPAACVAAVAAQSVICDTVDPDS 356
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A835SZQ8_9CHLO (MYND-type domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SZQ8_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 1.020e-6 Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 412 GMAVCAKCLEE----GRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASASV 579 G CA C +E GRSL+KC GC+ V YC + Q HWP+HK CKE+R+ A+ S Sbjct: 244 GKRKCALCSKEQQADGRSLMKCGGCKSVRYCSTDCQAAHWPQHKSACKELRQQLAAAQST 303
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A443I0S6_BYSSP (MYND-type zinc finger protein samB n=1 Tax=Byssochlamys spectabilis TaxID=264951 RepID=A0A443I0S6_BYSSP) HSP 1 Score: 59.7 bits (143), Expect = 2.940e-6 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 424 CAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASA 573 CA+C GR LL+C+GCR V YC +EHQ VH+ HK CK+++K A Sbjct: 22 CAQCSATGRKLLRCSGCRAVHYCNREHQTVHFILHKSVCKQIKKARAILA 71
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: W9XLC5_9EURO (MYND-type zinc finger protein samB n=1 Tax=Capronia epimyces CBS 606.96 TaxID=1182542 RepID=W9XLC5_9EURO) HSP 1 Score: 58.9 bits (141), Expect = 5.280e-6 Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 1 Query: 424 CAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKC 558 C CLE L KCTGCR V YCC+EHQV P HK C +++C Sbjct: 31 CGFCLEPKSKLSKCTGCRAVRYCCREHQVQDRPGHKSVCNRIKRC 75
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A1Y1HNB4_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HNB4_KLENI) HSP 1 Score: 53.9 bits (128), Expect = 2.100e-5 Identity = 22/49 (44.90%), Postives = 26/49 (53.06%), Query Frame = 1 Query: 436 LEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASASVV 582 L GR KC C + LYCCKEHQ +HW HK +CK K S + Sbjct: 63 LNAGRPFSKCADCSLALYCCKEHQKLHWKTHKKHCKYDTKSVDRSGKMT 111
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A2G5HQ80_CERBT (MYND-type zinc finger protein samB n=1 Tax=Cercospora beticola TaxID=122368 RepID=A0A2G5HQ80_CERBT) HSP 1 Score: 54.3 bits (129), Expect = 2.570e-5 Identity = 21/46 (45.65%), Postives = 26/46 (56.52%), Query Frame = 1 Query: 418 AVCAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRK 555 A C C +L C GC++V YCCKEHQ WP HK C ++K Sbjct: 9 AQCNHCKTAAGNLSTCAGCKVVKYCCKEHQAADWPTHKAQCTPVKK 54
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A084R259_STAC4 (MYND-type zinc finger protein samB n=1 Tax=Stachybotrys chlorohalonata (strain IBT 40285) TaxID=1283841 RepID=A0A084R259_STAC4) HSP 1 Score: 56.6 bits (135), Expect = 2.960e-5 Identity = 24/62 (38.71%), Postives = 33/62 (53.23%), Query Frame = 1 Query: 424 CAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRKCEGASASVVPAPSTLPPE 609 C +C G LL+C+GCR V YC +EHQ H P+HK C ++K A +PP+ Sbjct: 22 CPECSATGPQLLRCSGCRAVRYCSREHQAAHRPKHKSACNMIKKARAKVAEEEDRVRNMPPD 83
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A8H4P1K2_9HYPO (MYND-type zinc finger protein samB n=1 Tax=Fusarium albosuccineum TaxID=1237068 RepID=A0A8H4P1K2_9HYPO) HSP 1 Score: 56.2 bits (134), Expect = 5.220e-5 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 424 CAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMRK 555 C +C G LL+C+ CR V YC +EHQV H PEHK C ++RK Sbjct: 400 CPQCSATGPQLLRCSACRAVRYCSREHQVAHRPEHKTACTKIRK 443
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Match: A0A1E7FZT3_9STRA (MYND-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZT3_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 7.670e-5 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 454 LLKCTGCRMVLYCCKEHQVVHWPEHKGYCKEMR 552 LLKC GC+MV YCCK+HQ WP HK +CK+ + Sbjct: 220 LLKCAGCKMVYYCCKDHQRKDWPLHKKFCKDKK 252 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7976.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7976.1.1 >prot_C-tenellus_contig7976.1.1 ID=prot_C-tenellus_contig7976.1.1|Name=mRNA_C-tenellus_contig7976.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=211bp MDKHSFEEDMKGMAVCAKCLEEGRSLLKCTGCRMVLYCCKEHQVVHWPEHback to top mRNA from alignment at C-tenellus_contig7976:1629..6521+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7976.1.1 ID=mRNA_C-tenellus_contig7976.1.1|Name=mRNA_C-tenellus_contig7976.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4893bp|location=Sequence derived from alignment at C-tenellus_contig7976:1629..6521+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7976:1629..6521+ >mRNA_C-tenellus_contig7976.1.1 ID=mRNA_C-tenellus_contig7976.1.1|Name=mRNA_C-tenellus_contig7976.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=633bp|location=Sequence derived from alignment at C-tenellus_contig7976:1629..6521+ (Choristocarpus tenellus KU2346)back to top |