mRNA_C-tenellus_contig7890.1.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A7S1TX98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX98_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.240e-28 Identity = 112/345 (32.46%), Postives = 158/345 (45.80%), Query Frame = 3 Query: 51 KEVWYDEACQQLVVRDGNFYLSVSLKEG---GKDSPRINLGGAGREVLLARFSLGNRALLALQLNSTTVEVVDV---RDGVDDVGVVPGSGSRKVWSIECKHPNVNSI-----------------LSGGVIWSEHGGNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAG-----LSHLLLLERG---MTKVELKHTV---------RMPFW-------------SPPIC------SVVDNLLCLHFPESEVSVAYDI 908 + VWYD Q V+R G Y SV G + SP + L ARFSL LA+Q+ + V V DV RDG G + + W I+ + +++ L+ GV+WS+HGG SQDLVLVTR GLE K++AK++ CK + I ++ FW+ P RL+LL TG +G M GY+L F+ D +L +P P S P F + L + +E L+ ++ YC+ + G +++L +ER +T V HT PF SP + SVVDNLL LH SVA+DI Sbjct: 81 ESVWYDGVQQHFVLRRGAAYHSVGCVGGRAAARVSPGVLLPHEAARAQYARFSLDG-CYLAVQVGAAEVHVFDVSAARDG--------GGRATQQWRIDVRSLGQSALSKLKSQSGGAAMAPPVLLTDGVLWSDHGGTSQDLVLVTRRGLEFFKVNAKKNSCK-HYRSIYNATSAFWFSPTSRLVLLSTGPTGTRMCGYFLPFDTSDMPKLEIPPPHSAPIFDLGLHGAPSLQARE-VGLVTLYNYDYCLQLLPGGGKADNPVAYLYRVERERITLTHVLALHTALHWGAPGSGTAPFPGGGQSGGQSGQAPSPSLFRAGMTHSVVDNLLVLHSGGMRESVAFDI 414
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A7S2HM34_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HM34_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.570e-26 Identity = 73/193 (37.82%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 372 IWSEHGGNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRL--RLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPI-CSVVDNLLCLHFPESEVSVAYDIHGAVNPPSRGG 941 IWS+HGGNSQDL+++T G E +K+S KR QCKLS +L + + Y P QRLLLL TG G +R ++L + L +L LP P+ VP F + R G H L+C++ +VYC ++ I + + R ++ T+ + SVVDNL+C H ES++S+ YDI P GG Sbjct: 1 IWSDHGGNSQDLIILTPRGAEFYKVSTKRGQCKLSRSLSYTTTA-WCYCPEQRLLLLATGVDGQELRAWFLKSTSSSDLPFKLELPPPDKVPKFHV---PHRIRAGNLH--LVCVYNKVYCCLLDSITATVYAYEVTRD-DGIQPAQTLNLYIRGDAFKVSVVDNLICFHSTESKISMLYDIRAPTADPITGG 186
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: F0YL77_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL77_AURAN) HSP 1 Score: 115 bits (287), Expect = 1.510e-23 Identity = 100/324 (30.86%), Postives = 142/324 (43.83%), Query Frame = 3 Query: 60 WYDEACQQLVVRDGNFYLSVSLKEGGKDSPRINLGGAGREVLLARFSLGNRALLALQLNSTTVEVVDVRDG-----VDDVGVVPGSGS---RKVWSIECKHPNVNSILSGGVIWSEHGGNSQDLVLVTRIGLELHKISAKRDQCKL----SHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKII-LPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKH----------------------TVRMPFWSPPICSVVDNLLCLHFPESEVSVAYDIHGAVNP 926 +YDEA Q+VV+ +++ L G P + LA SL +LLA+Q++ T V V + DG V+ G PG G+ R ++ GGV+WS+HGG SQDL++VT G +L+K+S+ R QCKL HA C F Y P RLL+L TG G+ +R Y+L + D R LP PE VP + AGR + HA L + R + A LLL + L H T+ F P S D+LL +H ++ + +D+ G P Sbjct: 55 FYDEALGQVVVQRKATFVAYGLGRGAAAPPPRGVLVGATACRLAVSSLDG-SLLAVQVSETLVLVAEA-DGPRRWRVEVRGGAPGVGAFLERLAGGXXXXXDGAPRVVPGGVLWSDHGGTSQDLIVVTTRGADLYKVSSARGQCKLVRTLGHATRC-----FRYAPAHRLLVLATGPDGSELRCYFLRRDVGDLPRFELPPPERVPPLALAGYGAGRGGTRERHAQLQRLLSRPFSTRAGGPALDPRDLLLAAAYGEPLLLHRRPGARALDVFAVRRDGCAPLRTLEPGFPGPYGVSATDDLLLVHGAKARATAVFDVRGPRGP 371
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A482SV28_9ARCH (Mic1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV28_9ARCH) HSP 1 Score: 115 bits (289), Expect = 1.290e-22 Identity = 92/297 (30.98%), Postives = 145/297 (48.82%), Query Frame = 3 Query: 60 WYDEACQQ-LVVRDGNFYLSVSLKEGGKDSPRINLGGAGREVLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHGGNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNH----------MRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPIC---SVVDNLLCLHFPESEVSVAYDI 908 W+D A L+ DG+ Y+ +E + +++L+R SL ++ LLA+Q++ TT +V+V S + W++E K P IL GGV+WS+HGGNSQDLVLVT GLEL KISAK++ CKLS + S FWY R++LL + + + M G++L + L LP P+ +P F++ G V + +L ++GR+ + V AG L + + +TK ++ +P S DNL+ H + S +D+ Sbjct: 25 WFDPAHNHCLLYNDGSIYVLWLNEEHPTPKLLYHKADMTSDIILSRVSL-DKELLAIQISLTTCWIVEV-------------SSNRTWTVEVKLPAETIILKGGVMWSDHGGNSQDLVLVTSKGLELFKISAKKNVCKLSRVVAQPSFA-FWYNAHHRMILLASYSKPSRFGKAKKDVLLMDGFFLKTDRSAVPTLELPPPDRIPRFEL----GPGV-SSDSIHVLSVYGRLLTL-VQYSAGTEDFLTVYQ-LTKTSVERIYCLPLGGVVNALRVSTHDNLVICHNLPDKSSRVFDL 299
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: K3X8P4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8P4_GLOUD) HSP 1 Score: 90.5 bits (223), Expect = 1.060e-15 Identity = 74/250 (29.60%), Postives = 118/250 (47.20%), Query Frame = 3 Query: 159 LGGAGREVLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHG---GNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPICSVVDNLLCLHFPESEVSVA 899 +GG G V+ + GN +AL S + + V+ +V V+ + K W I CK N IL+ G++W+ H G+SQDL L+T++G+E +++S KR C L H I + FWY +L++ TG+ N + Y L + ++L P V + + GK L ++G+VY V + + L L+ER + +P + SVVDNLL H + VS+A Sbjct: 114 VGGRGDHVVAEKE--GNMEPVALMKLSLDKQFLAVQTSDIEVQVIRLTTREKFW-IMCKPNAGNRILTDGIVWNVHASTPGSSQDLFLITKMGIEQYRVSIKRRNCAL-HRSIGVYIHTFWYTASHSVLIISTGSRANEIVPYLLRGSSVEKL------PRLVFSSSV---------GKNDLYLASLYGQVYAVYGDTRSTKLLLYLVERNKVSCTRSLNLLLPPGTALEYSVVDNLLVCHSLDFNVSLA 344
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A0W8C5I3_PHYNI (Mic1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C5I3_PHYNI) HSP 1 Score: 90.9 bits (224), Expect = 5.760e-15 Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 3 Query: 180 VLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHG---GNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPICSVVDNLLCLHFPESEVSVAYDI 908 ++L + S+ ++ LA+Q + V+V+D G+R + + CK N IL GG+IW+ H +SQDL LVT++GLE H++S+KR C L H + V FWY +LL+ +G+ N + + L ++L PE V + + K+ L+ ++G +Y V + + L L+ R V +P + SVVDNLL H E VS+ +DI Sbjct: 91 IILLQLSVDSQ-FLAIQRSDIEVQVLD-------------RGTRASYWVLCKSKAGNRILHGGIIWNTHSLKATSSQDLFLVTKLGLEHHRVSSKRRSCAL-HRTVGLYVHEFWYAASHGVLLVSSGSRANEVVSFLLHGTNAEKL------PELVFSTSV---------SKQDLHLVTLYGDLYVVYSDTRSTKLLLYLVGRAKVTCVRSLNVMLPPGTALEYSVVDNLLVCHSMEFNVSMFFDI 306
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: W2R2V3_PHYPN (Mic1 domain-containing protein n=10 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R2V3_PHYPN) HSP 1 Score: 90.9 bits (224), Expect = 5.880e-15 Identity = 73/246 (29.67%), Postives = 117/246 (47.56%), Query Frame = 3 Query: 180 VLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHG---GNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPICSVVDNLLCLHFPESEVSVAYDI 908 ++L + S+ ++ LA+Q + V+V+D G+R + + CK N IL GG+IW+ H +SQDL LVT++GLE H++S+KR C L H + V FWY +LL+ +G+ N + + L ++L PE V + + K+ L+ ++G +Y V + + L L+ R V +P + SVVDNLL H E VS+ +DI Sbjct: 91 IILLQLSVDSQ-FLAIQRSDIEVQVLD-------------RGTRASYWVLCKSKAGNRILHGGIIWNTHSLKATSSQDLFLVTKLGLEHHRVSSKRRSCAL-HRTVGLYVHEFWYAASHGVLLVSSGSRANEVVSFLLHGTNAEKL------PELVFSTSV---------SKQDLHLVTLYGDLYVVYSDTRSTKLLLYLVGRAKVTCVRSLNVMLPPGTALEYSVVDNLLVCHSMEFNVSMFFDI 306
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A2D4BW57_PYTIN (Mic1 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW57_PYTIN) HSP 1 Score: 90.5 bits (223), Expect = 8.770e-15 Identity = 83/256 (32.42%), Postives = 121/256 (47.27%), Query Frame = 3 Query: 162 GGAGREVL-LARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHGGNSQ---DLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRL-RLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHT--VRMPFWSPPICSVVDNLLCLHFPESEVSVAYDI 908 G A E L L R S+ +R LA+Q + V+V+ + G W I CK + N I+S GV+WS H SQ DL L+T++G+E +++S KR C L H I V FWY +L++ TGA N + + LC ++L RL P + P RE+ L ++G ++ V + A LLL G +KV + V +P + SVVDNLL H E VS+ +D+ Sbjct: 89 GAAVHEPLALLRLSV-DRGFLAVQKSDIEVQVLSLATG------------ESHW-IVCKPTSGNRIVSDGVVWSTHATGSQRSQDLFLLTKLGIEQYRVSRKRGDCAL-HRTIAVFVHTFWYSAAHSVLIVSTGARANELVPFQLCASNVEKLPRLVFSTP--------VRP--RELF------LASLYGELFAVYSD--ARSMRLLLYLIGRSKVSCVRSLHVELPPGTALEFSVVDNLLVCHGVEFNVSLFFDV 311
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A8J5J2T4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J2T4_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.820e-14 Identity = 77/257 (29.96%), Postives = 124/257 (48.25%), Query Frame = 3 Query: 180 VLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEHG---GNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHT--VRMPFWSPPICSVVDNLLCLHFPESEVSVAYDIH--GAVNPP 929 ++L + S+ ++ LA+Q + V+V+ +R + + CK N L GGVIW+ H +SQDL L+T++GLE H++S KR C L H + V FWY +LL+ +G+ N + + L ++L PE V + + GK+ L+ ++G +Y V + + + LLL G TKV + V +P + SVVDNLL H E VS+ +DI G+++ P Sbjct: 91 IMLLQLSVDSQ-FLAIQRSDIEVQVLH-------------RATRASYWVLCKSKAGNRTLHGGVIWNTHSVKSTSSQDLFLITKLGLEHHRVSYKRRSCAL-HRTVGLYVHEFWYAASHGVLLVSSGSRANEVVPFLLHGTNAEKL------PELVFSTSV---------GKQDLHLVTLYGDLYVVYTDTRS--TKLLLYLVGRTKVTCVRSLNVMLPPGTALEYSVVDNLLVCHSMEFNVSLFFDIKCVGSISDP 315
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Match: A0A3M6VRF5_9STRA (Mic1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRF5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.980e-14 Identity = 92/314 (29.30%), Postives = 143/314 (45.54%), Query Frame = 3 Query: 48 NKEVWYDEACQQLVV----------RDGNFYLSVSLKEGGK---DSPRINLGGAGREVLLARFSLGNRALLALQLNSTTVEVVDVRDGVDDVGVVPGSGSRKVWSIECKHPNVNSILSGGVIWSEH---GGNSQDLVLVTRIGLELHKISAKRDQCKLSHALICDSVQNFWYEPVQRLLLLGTGASGNHMRGYWLCFEAPDRLRLALPKPESVPNFKIILPAGREVLGKEHASLLCIHGRVYCVCVNEIAGLSHLLLLERGMTKVELKHTVRMPFWSPPIC--SVVDNLLCLHFPESEVSVAYDI--HGAVNPP 929 N W+D A Q +++ D + L+ S E D G RE + R ++ LQL S + + ++ +V V+ + W ++C N IL GGVIW +H +SQDL LVT++GLE H++S KR C L H ++ V FWYE + +L L +G+ N + P L A E++P K++ +GK+ L+ ++G VY V N + LLL G TKV ++ + + SVVDNLL H + VS +DI +G+++ P Sbjct: 19 NHRAWHDAAHQSVLLLFSTSVKILPMDASLNLTTSSSENLMTLYDFSEPEASGDHREAVQQRKMT---PIMLLQL-SVDGQFLAIQRSDIEVQVLHRATRVSNW-MQCLSKAGNRILHGGVIWRKHFAKSSSSQDLFLVTKLGLEHHRVSLKRRTCFL-HKIVGLYVHAFWYEALHGVLFLSSGSRANEI--------VPFLLHGA--NVETLP--KLMFSTS---VGKQDLHLVTLYGDVYAVYHNPCT--TKLLLYLVGRTKVTCVRSLNLMLSPGTVFEYSVVDNLLVCHSLDFNVSFFFDIKCNGSISDP 309 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7890.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7890.1.3 >prot_C-tenellus_contig7890.1.3 ID=prot_C-tenellus_contig7890.1.3|Name=mRNA_C-tenellus_contig7890.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=790bp MIDLCRPIPLDILSNKEVWYDEACQQLVVRDGNFYLSVSLKEGGKDSPRIback to top mRNA from alignment at C-tenellus_contig7890:16..3817- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7890.1.3 ID=mRNA_C-tenellus_contig7890.1.3|Name=mRNA_C-tenellus_contig7890.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3802bp|location=Sequence derived from alignment at C-tenellus_contig7890:16..3817- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7890:16..3817- >mRNA_C-tenellus_contig7890.1.3 ID=mRNA_C-tenellus_contig7890.1.3|Name=mRNA_C-tenellus_contig7890.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=2370bp|location=Sequence derived from alignment at C-tenellus_contig7890:16..3817- (Choristocarpus tenellus KU2346)back to top |