mRNA_C-tenellus_contig7884.2.7 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: A0A835YRX0_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX0_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.680e-26 Identity = 99/315 (31.43%), Postives = 142/315 (45.08%), Query Frame = 3 Query: 885 DQVRTNVFAISALK-VSDDSSKIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAHDLIAR------LLAGTGDFAEAASHCEEAVRILEKKYSQG-DVELGQEMFKLAGLYFNAGLLSRCFG 1805 ++V N F ISA+ ++ +S + H+ + V +Y A +NHSCRP F+G + V AT+ I +G+P+TISYGPLA + P + +RR L Y F C C ACI E ++A S G GE S+ + S+ + C C ++ P+ + ALL E +++ A HVE R+ L WRQ A+ +A HD +AR LA F EAA HCE+++ IL + G ELG+E K AGLY A +L C G Sbjct: 39 NRVLYNSFTISAVADTTEAASAFVDVEHVKLGVVVYLHGAAMNHSCRPTAAVHFEGTTLVVTATQAIAEGDPVTISYGPLAWRDP-LDRRRAHLLRRYCFVCCCVACI--------------EEEMAALKPLTDASSSGQSGE--ASQLRCGSRPRVLRCGVCSHSITPAASRALLVAAGEQQAAFKVAAAR--------------------GHVEDLRR--------VLAWRQRSSAPGALAVAETHDALARQVVVIAALAEHDQFDEAAMHCEQSITILTTRQGGGLSAELGREHLKCAGLYM-AEMLRACCG 307
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: A0A6H5L8Y3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Y3_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.580e-25 Identity = 77/173 (44.51%), Postives = 92/173 (53.18%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSS--KIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPAC--------------------------IDADRESSHASAS-SKEVDLAYTTTSLACRSKGCQGELCV 1319 +V TN F IS+L+ SD + + L H VAVGLY A+M+NHSCRPN LA F G EM VVATR I +GEP+TISYGPLASK+ S +R+ L +YFF C C AC D D+E A+ SK D A T S GC G LCV Sbjct: 370 KVSTNAFTISSLRCSDSRAGHNVRPLKHATVAVGLYLVASMINHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASKMSSTSERQAYLSRAYFFRCECIACHPLSEETATTPSRRSRGSEGGDERQLTDRDKEGKAIEATFSKRTDFACTEA----ESGGCPGTLCV 538
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: D7FV15_ECTSI (Set and mynd domain containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV15_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.970e-25 Identity = 61/107 (57.01%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSS--KIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPAC 1202 +V TN F +S+L+ SD + + L H VAVGLY A+M+NHSCRPN LA F G EM VVATR I +GEP+TISYGPLASKI S +R+ L +YFF C C AC Sbjct: 140 KVSTNAFTVSSLRCSDPPAGHNVRPLKHATVAVGLYLVASMMNHSCRPNALASFHGGEMRVVATRAIERGEPVTISYGPLASKISSASERQAYLSRAYFFRCECIAC 246
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: A0A8J9Z4M1_BRALA (SMYD4 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z4M1_BRALA) HSP 1 Score: 103 bits (257), Expect = 5.660e-19 Identity = 94/340 (27.65%), Postives = 148/340 (43.53%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSSKIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTL--QNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTV--CLQADD-PQLQELQDMEHC 1892 Q+R N AI+ L+ D S + + +A ++PT A+LNHSCRPN F G + V A I GE L YGP A ++ +R+ L Q YFF C C AC + D + VD+ A + C + +K + +N NP E D K+ K +++ + A +E + G QCL+ + L + +AR HD +AR A +GD ++ H ++++ +E ++ VEL E+ KLA L FN ++ C ++A LT+ C D P+ +EL+ M+ C Sbjct: 581 QLRCNAQAITTLQEQDSVSLLED-KQVRLATAVFPTEALLNHSCRPNVFVSFQGKTLIVRAVSHIKTGEELLHCYGPHAGRMGRT-ERQAALHVQEQYFFSCRCDACQEEDNPDT--------VDMFS-----AYKCPTCSNAARLQDNKLVCTS---------LNCNPQ-------EDTNDIKTTSKKIQDLFVKSSALLDEGQVQEAVSG-------------LKQCLVLQWKILHPSNKDIARTHDALARCYATSGDCKKSVEHLKKSLSAVELQFGACSVELAHELHKLAQLQFNGQQVAECLDTIERA---LTIFGCHYGDHHPKSKELRAMKDC 873
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: A0A6P4ZFY6_BRABE (SET and MYND domain-containing protein 4 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZFY6_BRABE) HSP 1 Score: 102 bits (253), Expect = 1.580e-18 Identity = 94/337 (27.89%), Postives = 143/337 (42.43%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSSKIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLT-EVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTVCLQADD-PQLQELQDMEHC 1892 Q+R N AIS L+ D S + + +A ++PT A+LNHSCRPN F G + V A I GE L YGP A ++ +R+ L Y+F C C AC + + D ++ C C + HK + C N T E +D AL E V++A S G++ QCL+ + L + +AR HD +AR A TGD ++ H ++++ +E ++ VEL E+ KLA L FN ++ C ++A S+ C D P+ +EL+ M+ C Sbjct: 517 QLRCNTQAISTLQEQDSVSLLED-KQVRLATAVFPTEALLNHSCRPNVFVSFQGKTLIVRAVSHIKAGEELLHCYGPHAGRMGRT-ERQAALLEQYYFSCSCDACQEEE----------DNPDTVDIFSAYKC--PFCSNAAKLQDHK-------LTCTSTTCNTQADTDNIKTTSEKIQDLFIQSCALLEEGQVQEAVS-------GLK----------------QCLVLQWKILHPSNKDIARTHDALARCYATTGDCKKSVEHLKKSLSAVELQFGACSVELAHELHKLAQLQFNGQQVAECLDTIERAL-SIFGCHYGDHHPKTKELKAMKDC 808
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: A0A3B4D161_PYGNA (SET and MYND domain-containing protein 4 n=3 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4D161_PYGNA) HSP 1 Score: 101 bits (252), Expect = 1.930e-18 Identity = 93/351 (26.50%), Postives = 149/351 (42.45%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSS-KIASLTHINVAVGLYPTAAMLNHSCRPNTLARFD-------------GNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLM----WRQSKLIGTAMGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTVCLQADDPQLQELQDME 1886 Q+R N A++A++V +D + S + +A ++P ++LNHSC PNT F G + + + + G+ L YGP S++ V QR+ L YFFHC C C +++L T +LA S G + C +CG +L A A + + ++Q + T+L + + G V+L LD + + L S L+ T D AR+ A G++ +AASH + +V + ++ + VELGQ++FKLA LYFN + A L++ +LQELQ ME Sbjct: 439 QLRCNAQAVTAVRVKEDGGLAVQSSGEVRIATAVFPVLSLLNHSCCPNTSVSFSLGLSSEAPVSSASGVAVTIRTCKDVAAGQELLHCYGPHCSRM-DVGQRQRLLLEQYFFHCHCEVC---------------KMELTAGTRTLATASHGLR------------------CGRCGSSLQ---ARAEVHVCPQSPCNYQ--ISNTELQGRIETLQQRL-----GRAVQLMENDGLDGALRVLQEAATQADSILMKTHPLQGELADATARVFAALGNWRQAASHLKRSVAAVRCQFGEDSVELGQQLFKLAQLYFNGRDMQSALSVIPSAHRLLSLHCDPHCEELQELQQME 745
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: C3ZQQ3_BRAFL (SET and MYND domain-containing protein 4 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZQQ3_BRAFL) HSP 1 Score: 98.2 bits (243), Expect = 2.770e-17 Identity = 90/338 (26.63%), Postives = 154/338 (45.56%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSSKIASLTHINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTV--CLQADD-PQLQELQDMEHC 1892 Q+R N AI+ L+ D S + + +A ++PT A+LNHSCRPN F G + V A I GE L YGP A ++ +R+ L+ YFF C C AC + + ++ ++ AY +C + K K ++ C + +D K+ K ++ DL +++++ +E ++ A+ QCL+ + L + +AR HD +AR A +GD ++ H ++++ +E ++ VEL E+ KLA L FN ++ C ++A LT+ C D P+ +EL+ M+ C Sbjct: 612 QLRCNAQAITTLQEQDSVSLLED-KQVRLATAVFPTEALLNHSCRPNVFVSFQGKTLIVRAVSHIKPGEELLHCYGPHAGRMV-YGERQAALKEQYFFSCSCDAC-----QEQVGNPNTVDMFSAYKCP------------VCNNAAKLQDK--KLVCTSPNCDAQGD---------TDDIKTTSKKIQ--DLFVQSSAF-------LEEGQIQ----EAVSGLKQCLVLQWKILHPSNKDIARTHDALARCYATSGDCKKSVEHLKKSLSTVELQFGACSVELAHELHKLAQLQFNGQQVAECLDTIERA---LTIFGCHYGDHHPKSKELRAMKDC 903
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: UPI001C8A79BE (SET and MYND domain-containing protein 4 isoform X1 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A79BE) HSP 1 Score: 97.1 bits (240), Expect = 5.450e-17 Identity = 92/364 (25.27%), Postives = 154/364 (42.31%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSS-KIASLTHINVAVGLYPTAAMLNHSCRPNTLARFD--------------------GNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKG--CQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKA---LKETDLVEKANSYNPSKEEG---IEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTVCLQADDPQLQELQDMEHC 1892 Q+R N A++A+ V ++S + S I +A ++P ++LNHSC PNT F G + V A++ + G+ + YGP S++ + ++R L+ Y+FHC C AC R+ + S ++ E L C G Q +C L C C +++ + SW + D+ K + +E IE + + A K ++Q S L T D AR+ A TG++ AASH + ++ ++ ++ + +ELGQ++FKLA LYFN G + L++ ++QELQ+ME C Sbjct: 430 QLRCNAQAVTAVMVEEESGVAVQSSNEIRIATAIFPVLSLLNHSCSPNTSISFTTGRHFVRSECDVDRPETSRGGVTVTVRASKDLTPGQEILHCYGPHCSRMEATERQRLLLEQ-YYFHCDCQAC---QRDLTEGSQNATE----NAAPGLKCAKCGKPLQVNICRKAQPVLRCVCLDVCCTFQSHMDRYMC------------SWPSCGHQISSADVQNKLKGFRCLLDEAFHLIERDRFDEALKILKSATSQA----NSILTETHPLQGELADATARVYATTGEWILAASHLKRSIVAIQAQFGEDSIELGQQLFKLAQLYFNGGDCGAALSVIPRVHKLLSLHCGPHSEEVQELQEMERC 769
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: UPI0018993D68 (SET and MYND domain-containing protein 4 n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI0018993D68) HSP 1 Score: 96.3 bits (238), Expect = 9.200e-17 Identity = 102/376 (27.13%), Postives = 157/376 (41.76%), Query Frame = 3 Query: 888 QVRTNVFAISALK-VSDDSSKIASLTHINVAVGLYPTAAMLNHSCRPNTLARF-----------------------DGNE-----MEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPAC-IDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGC----RMWCAQCGVNLNPSIAEALLTEVAEDAKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTAMGLARAH-------DLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTVCLQADDPQLQELQDMEHC 1892 Q+R N AI L+ +++++ S + +A ++P ++LNHSC PNT F D +E + V A R I G+ + YGP +S++ + +R+ LQ Y+F C C AC + R+ + S+ G LC+ + L K C R CG ++ + L EV K + L ET++ ++A V L ++ + RQS LI L H D AR A GD+ AA H E++V +Y + +ELGQ++FKLA L+FNAG +A+ L++ P+LQELQ ME C Sbjct: 425 QLRCNAQAIITLQDTGAENARVQSQQEVRLATAMFPALSLLNHSCCPNTSLVFSTGTAADTCGSHKSADISDGLCEDKHEACEVTVTVRAARAINPGQEILHCYGPHSSRMVTS-ERQRLLQEQYYFLCQCEACSVQEGRQQQDGARGSRNES----------------GLLCLKCKEALKKICEGDFRCMLPTCGHRMSSAEVSHKLQEVRAALKRAVE-LMETEMPDEA---------------VRLLKQ----------IKRQSGLI-----LGETHPLHGELADATARAFASMGDWKNAADHLEQSVVATGFQYGEDSIELGQQLFKLAQLHFNAGARGAALSVIPKARQILSLHCGPHCPELQELQAMEEC 752
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Match: UPI001BB1C5DA (SET and MYND domain-containing protein 4-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1C5DA) HSP 1 Score: 95.1 bits (235), Expect = 2.140e-16 Identity = 89/350 (25.43%), Postives = 154/350 (44.00%), Query Frame = 3 Query: 888 QVRTNVFAISALKVSDDSSKIASLT-------HINVAVGLYPTAAMLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRRTTLQNSYFFHCLCPACIDADRESSHASASSKEVDLAYTTTSLACRSKGCQGELCVSKHKYLSKGCRMWCAQCGVNLNPSIAEALLTEVAED-----AKSWQKALKETDLVEKANSYNPSKEEGIEGNHVELARKRALDLSTQCLMWRQSKLIGTA-MGLARAHDLIARLLAGTGDFAEAASHCEEAVRILEKKYSQGDVELGQEMFKLAGLYFNAGLLSRCFGACQQAKGSLTVCLQADDPQLQELQDMEHCCR 1898 Q+++N AI+ ++ + + A T + +A +YPT +++NH+C+PN +A F + + V AT I G+ + YGP + S R+ L Y F C C AC SH +S KE +G R+ C QCG LN + V D + Q K ++LV + ++ +EG+ A R + T+C + +++ T M LA A+D +A+ A +F EA S +++ ++E KY + +E+ E++KLA +YFN ++ A +A T + ++Q+L M+ C + Sbjct: 458 QLKSNSHAITHVRSPEKGNTAAKSTGIIEEISQVRIATAVYPTVSLMNHACQPNVIASFRKDIISVRATEMIRCGDEIQHCYGPQVGHMTSS-DRQEALLKQYCFTCCCRAC------KSHPKSSEKE------------------------------RGVRIKCPQCGHQLNFETSMCGPCNVRFDLVTLLTMATQAMTKISELVHEFSA--------VEGDK---ALMRDVVSRTKCCIEELEQIVVTPDMKLAEAYDFMAKCHAMLDEFKEAGSWLTKSIPMIEWKYGRDSIEVANELYKLAQIYFNGEEVAPATEAIDRALELFTRHYGNNTCEVQDLMKMKLCLK 759 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7884.2.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7884.2.7 >prot_C-tenellus_contig7884.2.7 ID=prot_C-tenellus_contig7884.2.7|Name=mRNA_C-tenellus_contig7884.2.7|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=305bp MLNHSCRPNTLARFDGNEMEVVATRPIGQGEPLTISYGPLASKIPSVVQRback to top mRNA from alignment at C-tenellus_contig7884:3630..6573+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7884.2.7 ID=mRNA_C-tenellus_contig7884.2.7|Name=mRNA_C-tenellus_contig7884.2.7|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2944bp|location=Sequence derived from alignment at C-tenellus_contig7884:3630..6573+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7884:3630..6573+ >mRNA_C-tenellus_contig7884.2.7 ID=mRNA_C-tenellus_contig7884.2.7|Name=mRNA_C-tenellus_contig7884.2.7|organism=Choristocarpus tenellus KU2346|type=CDS|length=915bp|location=Sequence derived from alignment at C-tenellus_contig7884:3630..6573+ (Choristocarpus tenellus KU2346)back to top |