mRNA_C-tenellus_contig7844.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: D8LT25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT25_ECTSI) HSP 1 Score: 302 bits (774), Expect = 5.170e-91 Identity = 135/179 (75.42%), Postives = 154/179 (86.03%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWCE LQ ES IG+ L INRRGFLTINSQPAVN APS+HP FGWGG GGRVYQKAYVEFF+S+ L VL+AC SRP LNYYAV +G T S G+KGTTAL+WGVFPN+EVQQPT+FDPETYMVWK EAFRLW+DLWAS+YDDESKSA LLH+IHD+Y+LVA+VDN++I GNLWE+ Sbjct: 133 PWCEVSLQQESSTIGKELAVINRRGFLTINSQPAVNAAPSDHPVFGWGGAGGRVYQKAYVEFFTSEALLDEVLEACASRPELNYYAVDVKGRTRSRGVKGTTALSWGVFPNREVQQPTVFDPETYMVWKGEAFRLWVDLWASLYDDESKSAELLHDIHDSYYLVAVVDNNFIDGNLWEI 311
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A6H5KKX8_9PHAE (Methylenetetrahydrofolate reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX8_9PHAE) HSP 1 Score: 307 bits (786), Expect = 2.830e-89 Identity = 137/179 (76.54%), Postives = 157/179 (87.71%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWCE LQ ES IG+ L AINRRGFLTINSQPAVNGAPS+HP FGWGGGGGRVYQKAYVEFF+S+ L VL+AC SRP LNYYAV +G T S G+KGTTAL+WGVFPN+EVQQPT+FDPETYMVWK EAFRLW+DLWAS+YD+ESKSA LLH+IHD+Y+LVA+VDN++I GNLWE+ Sbjct: 418 PWCEVSLQQESSTIGKELAAINRRGFLTINSQPAVNGAPSDHPVFGWGGGGGRVYQKAYVEFFTSEALLDEVLEACASRPELNYYAVDVKGRTRSRGVKGTTALSWGVFPNREVQQPTVFDPETYMVWKGEAFRLWVDLWASLYDEESKSAELLHDIHDSYYLVAVVDNNFIDGNLWEI 596
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: W7TSL1_9STRA (Methylenetetrahydrofolate reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSL1_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.030e-69 Identity = 116/180 (64.44%), Postives = 142/180 (78.89%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYIS-GNLWEV 1444 PWCE LQ E+G I L IN+ GFLTINSQPAVNGA S+ FGWGG GGRVYQKAYVE F+SQ+NL+ +++ C +P+L+YYAV GNTYS+G K TALTWGVFP E+ QPTIFDP T++VWK+EAF+LW +WAS+YDDES S AL+H+IHDTYFLVAI+DND+ S ++W V Sbjct: 424 PWCEVPLQAETGTISADLVKINKAGFLTINSQPAVNGALSDDAVFGWGGAGGRVYQKAYVECFTSQENLKLLMELCEKKPNLHYYAVDVAGNTYSNGSKKATALTWGVFPQCEILQPTIFDPNTFLVWKNEAFQLWTSIWASIYDDESASNALIHKIHDTYFLVAIIDNDFSSTASMWSV 603
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A835YII2_9STRA (Methylenetetrahydrofolate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII2_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.650e-66 Identity = 111/178 (62.36%), Postives = 135/178 (75.84%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWE 1441 PW E+ L ES +I L INR G+LTINSQP NG S+ FGWGG GGRVYQKAYVEFF+S + L VL C RPHL+YYAV EG+ S G +GTTALTWGVFP+KEV QPTIFD ET++VW++EAF LW LWA+ Y ++S+SAALLH++HDTY+LVAI+DND+ +LWE Sbjct: 402 PWSESPLHLESALIRARLARINRAGYLTINSQPRANGEKSDDAAFGWGGPGGRVYQKAYVEFFTSPEGLERVLSVCEGRPHLSYYAVDAEGDCRSRGGRGTTALTWGVFPDKEVLQPTIFDVETFLVWRNEAFNLWTHLWATAYLEDSRSAALLHDVHDTYYLVAIIDNDFFQDDLWE 579
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A662WW66_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW66_9STRA) HSP 1 Score: 234 bits (597), Expect = 2.910e-66 Identity = 102/179 (56.98%), Postives = 137/179 (76.54%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWC+A L E+ + Q L A N GFLTINSQP VNGA S+ P FGWGG GGRVYQKAYVE F S +N++ +++ +P L Y+AV+ G++YS+ K A+TWGVFPNKE+ QPTI D +++VWKDEAF LW+ LWAS+Y++ S+SA LL EIHD+YFLV+IVDND+++G++W++ Sbjct: 106 PWCDAALHAETSTVQQELAAANAAGFLTINSQPRVNGALSDDPLFGWGGPGGRVYQKAYVECFVSPENMKLIIENAAKKPSLQYHAVNLNGHSYSNASKSAVAVTWGVFPNKEILQPTIVDSSSFLVWKDEAFALWLKLWASLYEEASQSARLLREIHDSYFLVSIVDNDFVNGSIWDL 284
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A485LAE6_9STRA (Methylenetetrahydrofolate reductase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAE6_9STRA) HSP 1 Score: 242 bits (618), Expect = 8.260e-66 Identity = 104/178 (58.43%), Postives = 138/178 (77.53%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWE 1441 PWC+ L E+ I + L A+NR GFLTINSQP VN APS+ P FGWGG GG VYQKAYVE F S +NL+ +++ C H+ Y+AV GN+YS+ KGTTA+TWG FPNKE+ QPTI D +++M WKDEAF LW+ +WAS+Y+DES + AL+H+IHDT+FLV+IVDN++++GN+W+ Sbjct: 398 PWCDTPLHLETKSIQERLAAVNRAGFLTINSQPRVNAAPSDDPMFGWGGPGGHVYQKAYVECFVSPENLKRIIEKCNKMKHVQYHAVDVHGNSYSNCGKGTTAVTWGSFPNKEILQPTIVDTDSFMTWKDEAFSLWLSMWASLYNDESAAHALIHQIHDTFFLVSIVDNNFVNGNIWD 575
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A8K1CJB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJB9_PYTOL) HSP 1 Score: 239 bits (611), Expect = 7.240e-65 Identity = 103/179 (57.54%), Postives = 134/179 (74.86%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWC+ L E+ I L +N+ GFLTINSQP VN APSN P FGWGG GG VYQKAYVE F S +NL+ ++D T ++ YYA+ GN+YS+ K A+TWGVFPNKE+ QPTI D +++ WKDEAF LW+ LWAS+YDD+S ++ LLHEIHD+YFLV+IVDND+++GN+W++ Sbjct: 401 PWCDEALHLETKSIQNQLEKVNQAGFLTINSQPRVNAAPSNDPVFGWGGAGGHVYQKAYVECFVSPENLKKIIDNATKTRYIQYYAIDARGNSYSNAGKSAIAVTWGVFPNKEILQPTIVDSTSFVAWKDEAFSLWLKLWASLYDDDSTASELLHEIHDSYFLVSIVDNDFVNGNIWDI 579
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: H3GAC2_PHYRM (Methylenetetrahydrofolate reductase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GAC2_PHYRM) HSP 1 Score: 239 bits (609), Expect = 1.490e-64 Identity = 104/179 (58.10%), Postives = 137/179 (76.54%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWC+A L E+ + Q L A N GFLTINSQP VNGA S+ P FGWGG GGRVYQKAYVE F S +N++ +++ +P + Y+AV+ G++YS+ K A+TWGVFPNKE+ QPTI D +++VWKDEAF LW+ LWAS+Y D S+SA LLHE+HDTYFLV+IVDND+++GN+W++ Sbjct: 402 PWCDAALHAETSTVQQELAAANSAGFLTINSQPRVNGALSDDPMFGWGGPGGRVYQKAYVECFVSPENMKIIIENAAKKPSVQYHAVNLNGHSYSNASKSAVAVTWGVFPNKEILQPTIVDSSSFLVWKDEAFALWLKLWASLYADGSQSAKLLHEVHDTYFLVSIVDNDFVNGNIWDL 580
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: M4BR52_HYAAE (Methylenetetrahydrofolate reductase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BR52_HYAAE) HSP 1 Score: 233 bits (595), Expect = 1.830e-63 Identity = 101/179 (56.42%), Postives = 135/179 (75.42%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWC+A L E+ + Q L N GFLTINSQP VNGA S+ P FGWGG GGRVYQKAYVE F S +N+++++ +P + Y+AV+ G++YS+ K A+TWGVFPNKE+QQPTI D +++VWKDEAF LW+ LWAS+Y+ S S LLHEIHDTYFLV++VDND+++G++W++ Sbjct: 318 PWCDAALHDETSTVQQELANANAAGFLTINSQPRVNGAVSDDPMFGWGGPGGRVYQKAYVECFVSPENMKTIITNAAKKPSVQYHAVNLNGHSYSNASKSAVAVTWGVFPNKEIQQPTIVDSSSFLVWKDEAFALWLKLWASLYEPSSPSFKLLHEIHDTYFLVSVVDNDFMNGHIWDL 496
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Match: A0A484DUI1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUI1_BRELC) HSP 1 Score: 227 bits (579), Expect = 2.410e-63 Identity = 99/179 (55.31%), Postives = 134/179 (74.86%), Query Frame = 2 Query: 908 PWCEAKLQPESGMIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFFSSQKNLRSVLDACTSRPHLNYYAVSDEGNTYSSGIKGTTALTWGVFPNKEVQQPTIFDPETYMVWKDEAFRLWIDLWASVYDDESKSAALLHEIHDTYFLVAIVDNDYISGNLWEV 1444 PWC+A L E+ I Q L N GF+TINSQP VNG S P FGWGG GGRVYQKAYVE F S +N++ ++D+ + + Y+AV+ +G++YS+ K A+TWGVFPNKE+ QPTI D +++VWKDEAF LW+ +WAS+Y +S+SA LLHEI+ TYFLV+IVDND+++GN+W++ Sbjct: 140 PWCDAALHAETSTIQQELADANAAGFMTINSQPRVNGVMSGDPMFGWGGPGGRVYQKAYVECFVSPENMKIIIDSAAKKTSVQYHAVNLQGHSYSNARKSAVAVTWGVFPNKEILQPTIVDCNSFLVWKDEAFALWMKMWASLYTKDSQSAMLLHEIYTTYFLVSIVDNDFVNGNIWDL 318 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7844.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7844.1.2 >prot_C-tenellus_contig7844.1.2 ID=prot_C-tenellus_contig7844.1.2|Name=mRNA_C-tenellus_contig7844.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=170bp MIGQVLGAINRRGFLTINSQPAVNGAPSNHPTFGWGGGGGRVYQKAYVEFback to top mRNA from alignment at C-tenellus_contig7844:602..5478- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7844.1.2 ID=mRNA_C-tenellus_contig7844.1.2|Name=mRNA_C-tenellus_contig7844.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4877bp|location=Sequence derived from alignment at C-tenellus_contig7844:602..5478- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7844:602..5478- >mRNA_C-tenellus_contig7844.1.2 ID=mRNA_C-tenellus_contig7844.1.2|Name=mRNA_C-tenellus_contig7844.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=510bp|location=Sequence derived from alignment at C-tenellus_contig7844:602..5478- (Choristocarpus tenellus KU2346)back to top |