mRNA_C-tenellus_contig7823.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: D7G0L8_ECTSI (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L8_ECTSI) HSP 1 Score: 308 bits (789), Expect = 3.070e-98 Identity = 163/190 (85.79%), Postives = 177/190 (93.16%), Query Frame = 1 Query: 1 MMSKVEATSSGNKETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 M++K A S ETDVS IRNFSIVAHIDHGKSTLADRLLE+ ++VA+R+MKKQLLDSMDLERERGITIKLNAARIEY A+DG+TYVLNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQGVEAQTLANVYLA+ENDLEIITVLNKIDLPAADP RIAEEVEATIGLDCT+AI SAKTGVGI++ILE Sbjct: 103 MLAKATA-SREETETDVSLIRNFSIVAHIDHGKSTLADRLLEYCDAVAKREMKKQLLDSMDLERERGITIKLNAARIEYPAEDGKTYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIITVLNKIDLPAADPYRIAEEVEATIGLDCTEAIPASAKTGVGIQEILE 291
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A836CDX2_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX2_9STRA) HSP 1 Score: 291 bits (745), Expect = 1.170e-92 Identity = 151/181 (83.43%), Postives = 164/181 (90.61%), Query Frame = 1 Query: 43 TDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQG-----VEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 +DVS IRNF I+AHIDHGKSTLADRLLEFT +V++RDMK QLLDSMDLERERGITIKLNAARI Y ADDGETY LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQG VEAQTLAN YLA+EN+LEII VLNKIDLPAADP+RIAEEVEATIGLDCT+ + CSAK G+GIK+ILE Sbjct: 13 SDVSNIRNFCIIAHIDHGKSTLADRLLEFTQTVSKRDMKAQLLDSMDLERERGITIKLNAARIMYTADDGETYQLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGKLGTRVEAQTLANCYLALENNLEIIPVLNKIDLPAADPERIAEEVEATIGLDCTEPLLCSAKAGIGIKEILE 193
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A7S3JTY0_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTY0_9STRA) HSP 1 Score: 292 bits (747), Expect = 4.000e-92 Identity = 143/179 (79.89%), Postives = 167/179 (93.30%), Query Frame = 1 Query: 34 NKETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 +K DVSR+RNF+I+AHIDHGKSTLADR+LE T +VA+R+M+ QLLDSMDLERERGITIKLNAAR+ Y A DGETY+LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDA+QGV+AQTLANVYLA+ENDLEII VLNKIDLP A+P+R+AEE+EATIGLDC+DA+ CSAK+G+GI D+LE Sbjct: 48 DKAPDVSRVRNFAIIAHIDHGKSTLADRMLEVTGTVAKREMQAQLLDSMDLERERGITIKLNAARMNYQAKDGETYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVQAQTLANVYLAIENDLEIIPVLNKIDLPQAEPERVAEEIEATIGLDCSDAVLCSAKSGLGIHDVLE 226
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A7S0UKX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKX5_9STRA) HSP 1 Score: 277 bits (708), Expect = 4.900e-92 Identity = 139/178 (78.09%), Postives = 159/178 (89.33%), Query Frame = 1 Query: 40 ETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGAD-DGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 E + RIRNFSI+AHIDHGKSTLADR+LE T +VA RDM++QLLD+MD+ERERGITIKL AAR+ Y + DGE Y LNL DTPGHVDFSYEVSRSLAACEGA+LVVDASQG+EAQTLANVYLA+ENDLEII VLNKIDLPAADPDR+AEE+E TIGLDC++ +H SAK+G+GI DILE Sbjct: 48 EYNAERIRNFSIIAHIDHGKSTLADRILESTQTVAARDMEEQLLDNMDIERERGITIKLQAARVLYKSKKDGEIYTLNLCDTPGHVDFSYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEIIPVLNKIDLPAADPDRVAEEIEDTIGLDCSEIVHASAKSGIGIDDILE 225
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A4D9CYR1_9STRA (Tr-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYR1_9STRA) HSP 1 Score: 291 bits (745), Expect = 3.420e-91 Identity = 147/184 (79.89%), Postives = 165/184 (89.67%), Query Frame = 1 Query: 19 ATSSGNKETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 AT++ + DV R+RNFSI+AHIDHGKSTLADRLLE T +VA RDMK QLLDSMD+ERERGITIKLNAAR+ Y A DGE Y+LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQGVEAQTLANVYLA+ENDLEII VLNKIDLPAADPDR+ EE+E T+GLDCT+A+ SAK+G+GI DILE Sbjct: 163 ATAAELGKYDVKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPAADPDRVQEEIEQTVGLDCTEAVRASAKSGIGIDDILE 346
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A7S2V3K4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3K4_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.450e-90 Identity = 137/162 (84.57%), Postives = 152/162 (93.83%), Query Frame = 1 Query: 85 IDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 IDHGKSTLADRLLE T +V +RDMK Q+LDSMD+ERERGITIK+ AAR+EY A DGETY+LNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLA+++DLEII VLNKIDLPAADPDRIAEEVE T+GLDCT+AI CSAKTG+GI+D+LE Sbjct: 1 IDHGKSTLADRLLEDTGTVQKRDMKSQVLDSMDIERERGITIKMQAARMEYKAKDGETYILNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAIDSDLEIIPVLNKIDLPAADPDRIAEEVEGTVGLDCTEAIFCSAKTGLGIEDLLE 162
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: GUF1_PHATC (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=GUF1_PHATC) HSP 1 Score: 287 bits (735), Expect = 1.980e-90 Identity = 143/175 (81.71%), Postives = 159/175 (90.86%), Query Frame = 1 Query: 46 DVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 D +IRNFSI+AHIDHGKSTLADRLLE T +VAQRDM+ QLLD+MDLERERGITIKL AAR+ Y A DGE Y LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQG+EAQTLANVYLA+ENDLEII +LNKIDLPAADP+R+AEE+EATIGLDC+ +H SAKTG+GI DILE Sbjct: 86 DAQKIRNFSIIAHIDHGKSTLADRLLETTQTVAQRDMEAQLLDNMDLERERGITIKLQAARVLYQARDGEMYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEIIPILNKIDLPAADPERVAEEIEATIGLDCSGIVHASAKTGIGIDDILE 260
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A7S3P6M7_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6M7_9STRA) HSP 1 Score: 286 bits (732), Expect = 3.950e-90 Identity = 144/175 (82.29%), Postives = 156/175 (89.14%), Query Frame = 1 Query: 46 DVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 D +IRNFSI+AHIDHGKSTLADRLLE T +VA RDM +QLLDSMDLERERGITIKL AAR+ Y A DGE Y LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQG+EAQTLANVYLA+ENDLEII VLNKIDLPAADPDR+A E+E TIGLDCTD + CSAK G+GI DILE Sbjct: 65 DSKKIRNFSIIAHIDHGKSTLADRLLESTQTVAARDMSEQLLDSMDLERERGITIKLQAARVLYKAKDGEIYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEIIPVLNKIDLPAADPDRVAAEIEETIGLDCTDIVKCSAKAGIGIDDILE 239
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: A0A1Z5K0C5_FISSO (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0C5_FISSO) HSP 1 Score: 284 bits (726), Expect = 1.090e-89 Identity = 141/187 (75.40%), Postives = 162/187 (86.63%), Query Frame = 1 Query: 10 KVEATSSGNKETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 + T+S D +IRNFSI+AHIDHGKSTLADRLLE T +V++RDM QLLD+MDLERERGITIKL AAR+ Y A DGETY LNLIDTPGHVDFSYEVSRSLAACEGA+LVVDASQG+EAQTLANVYLA+ENDLE+I VLNKIDLPAA+P+R+A E+E TIGLDC+D +H SAK G+GI+DILE Sbjct: 45 EASTTTSNGLTYDAKKIRNFSIIAHIDHGKSTLADRLLESTKTVSERDMTNQLLDNMDLERERGITIKLQAARVLYTAKDGETYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEVIPVLNKIDLPAAEPERVALEIEETIGLDCSDIVHASAKAGIGIEDILE 231
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Match: UPI000E6B80DD (GTP-binding protein n=1 Tax=Listeria monocytogenes TaxID=1639 RepID=UPI000E6B80DD) HSP 1 Score: 268 bits (686), Expect = 5.940e-89 Identity = 130/172 (75.58%), Postives = 156/172 (90.70%), Query Frame = 1 Query: 55 RIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRDMKKQLLDSMDLERERGITIKLNAARIEYGADDGETYVLNLIDTPGHVDFSYEVSRSLAACEGAILVVDASQGVEAQTLANVYLAMENDLEIITVLNKIDLPAADPDRIAEEVEATIGLDCTDAIHCSAKTGVGIKDILE 570 +IRNFSI+AHIDHGKSTLADR+LE T ++ R+MK QLLDSMDLERERGITIKLNA +++Y A DGETY+ +LIDTPGHVDF+YEVSRSLAACEGAILVVDA+QG+EAQTLANVYLA++NDLEI+ V+NKIDLPAADP+R+ EE+E IGLD +DA+ SAK+G+GI+DILE Sbjct: 12 KIRNFSIIAHIDHGKSTLADRILEQTGALTHREMKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVIGLDASDAVLASAKSGIGIEDILE 183 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7823.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7823.2.1 >prot_C-tenellus_contig7823.2.1 ID=prot_C-tenellus_contig7823.2.1|Name=mRNA_C-tenellus_contig7823.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=190bp MMSKVEATSSGNKETDVSRIRNFSIVAHIDHGKSTLADRLLEFTNSVAQRback to top mRNA from alignment at C-tenellus_contig7823:3813..6153+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7823.2.1 ID=mRNA_C-tenellus_contig7823.2.1|Name=mRNA_C-tenellus_contig7823.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2341bp|location=Sequence derived from alignment at C-tenellus_contig7823:3813..6153+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7823:3813..6153+ >mRNA_C-tenellus_contig7823.2.1 ID=mRNA_C-tenellus_contig7823.2.1|Name=mRNA_C-tenellus_contig7823.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=570bp|location=Sequence derived from alignment at C-tenellus_contig7823:3813..6153+ (Choristocarpus tenellus KU2346)back to top |