mRNA_C-tenellus_contig781.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.930e-36 Identity = 76/128 (59.38%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMS-LSGKVAVRDVVQFVPFNDFQGRDSTSQHALAKHVLQEIPSQFLSFMKSKNILPSPRRRL-SPLTGAG 378 GQKY VLCI+TDG I+D++ T AIV+A+ PLSIV+VGVG DFT M LD D ++L S +GKVA RD+VQFVPF DF G S +QHALAKHVL EIP QF+S+M+S I P+ +R S +TG G Sbjct: 468 GQKYHVLCIMTDGIINDMDATVSAIVDAADAPLSIVIVGVGQGDFTAMDHLDGDRQRLTSPFTGKVASRDMVQFVPFRDFNGFGSAAQHALAKHVLAEIPGQFISYMQSNGIDPANKRPPGSIVTGGG 595
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: A0A8J4YX13_9CHEL (Copine-8 n=2 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4YX13_9CHEL) HSP 1 Score: 129 bits (323), Expect = 2.100e-33 Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDST----SQHALAKHVLQEIPSQFLSFMKSKNILPSP 345 G +Y +L I+TDG I D+ +T++AIV ASSLPLSI++VGVGN DF M +LD D+++L S +G++AVRD+VQFVPF F +S SQ LAK VL EIP Q +SFMKSKNI+P+P Sbjct: 245 GSQYFILLILTDGIISDMAQTKEAIVNASSLPLSIIIVGVGNVDFEAMEELDGDDQRL-SYNGRLAVRDIVQFVPFRKFISSNSMNFQRSQALLAKEVLAEIPYQIISFMKSKNIVPNP 362
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: A0A2G8LHY6_STIJA (Putative copine-8 isoform X2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LHY6_STIJA) HSP 1 Score: 129 bits (325), Expect = 4.180e-33 Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDST--SQHALAKHVLQEIPSQFLSFMKSKNILPSPRR 351 G +Y +L IITDG I D+ +T+ IV A+SLP+SI++VGVGN DFT M +LD D +L S GKVA RD+VQFVPF DF+ ++ SQ LAK VL EIP QFLS+M+S + P PRR Sbjct: 331 GSEYFILLIITDGIITDMQKTKKEIVRAASLPMSIIIVGVGNEDFTAMEELDGDEVRL-SFQGKVAERDIVQFVPFRDFENANNAVISQAQLAKEVLAEIPDQFLSYMRSNGVKPRPRR 448
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: A0A8J4YUZ1_9CHEL (Copine-8 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4YUZ1_9CHEL) HSP 1 Score: 129 bits (323), Expect = 8.600e-33 Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDST----SQHALAKHVLQEIPSQFLSFMKSKNILPSP 345 G +Y +L I+TDG I D+ +T++AIV ASSLPLSI++VGVGN DF M +LD D+++L S +G++AVRD+VQFVPF F +S SQ LAK VL EIP Q +SFMKSKNI+P+P Sbjct: 342 GSQYFILLILTDGIISDMAQTKEAIVNASSLPLSIIIVGVGNVDFEAMEELDGDDQRL-SYNGRLAVRDIVQFVPFRKFISSNSMNFQRSQALLAKEVLAEIPYQIISFMKSKNIVPNP 459
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: UPI0018F4C624 (copine-6-like n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F4C624) HSP 1 Score: 124 bits (310), Expect = 6.990e-32 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDSTSQHALAKHVLQEIPSQFLSFMKSKNILPSPRRRLSP 363 KY +L I+TDG + DI ETRDAIVEAS LP+SI++VGVGN DFT MR LD D+ L+S + A RD+VQFVPF DF+ T ALAK VL E+P Q + F S+ I P P++ P Sbjct: 189 ASKYYILLILTDGVVTDIGETRDAIVEASHLPMSIIIVGVGNADFTDMRTLDGDDGILLSTRDRAAARDIVQFVPFRDFK---KTPASALAKCVLAEVPKQVVEFYASQGIGPEPKQSDGP 306
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: A0A161MJS2_TRIIF (Copine-8-like protein isoform x1 (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MJS2_TRIIF) HSP 1 Score: 119 bits (298), Expect = 7.510e-32 Identity = 63/116 (54.31%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDSTS-QHALAKHVLQEIPSQFLSFMKSKNILPSP 345 G Y +L I+TDG I D+ +T AIV+ASSLPLSI++VG+GN DFT M LD D L S G A RD+VQFVPF+ + + S +H LA+ VL EIP QF+S+MKS+NI+P P Sbjct: 44 GSSYFILLILTDGVITDMPQTCQAIVKASSLPLSIIIVGIGNADFTAMEQLDGDTVALTS-GGMRAERDIVQFVPFSKYSSNATLSARHLLAREVLAEIPGQFVSYMKSRNIVPKP 158
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: R7UYG1_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UYG1_CAPTE) HSP 1 Score: 127 bits (319), Expect = 7.620e-32 Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRD----STSQHALAKHVLQEIPSQFLSFMKSKNILPSP 345 G Y VL I+TDG I D +T+DAIV+ASSLP+SI++VGVGN DF M +LD+DN +LMS GK A RD+VQFVPF +F GR + S+ LAK VL EIP Q + +MK + ILP P Sbjct: 429 GSNYFVLLILTDGVITDFPQTKDAIVQASSLPVSIIIVGVGNADFDAMEELDADNHRLMS-HGKAAERDIVQFVPFREFLGRHGNDLAASEAHLAKEVLAEIPDQIVGYMKKRGILPKP 546
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: UPI001CB8702E (copine-7-like n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB8702E) HSP 1 Score: 118 bits (296), Expect = 1.350e-31 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 4 QKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDSTSQHALAKHVLQEIPSQFLSFMKSKNILPSPRRR 354 QKY +L I+TDG + DI+ETRDAIVEAS LP+SI++VGVGN DF+ MR LD ++ L+S G+ A RD+V+FVPF +F+ ++ ALAK+VL E+P Q + F S+ + P P ++ Sbjct: 11 QKYYMLLILTDGVVTDISETRDAIVEASCLPMSIIIVGVGNADFSDMRALDGEDGILLSSYGQEAARDIVKFVPFREFKKAPTS---ALAKYVLAEVPKQVVEFYASQGLPPEPHKQ 124
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: UPI001B7E425B (LOW QUALITY PROTEIN: copine-6-like n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E425B) HSP 1 Score: 124 bits (312), Expect = 2.400e-31 Identity = 64/118 (54.24%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRDSTSQHALAKHVLQEIPSQFLSFMKSKNILPSPRRR 354 KY +L I+TDG + DI ETRDAIVEAS LP+S++VVGVGN DFT MR LDSD+ L+S G+ A RD+VQFVPF DF+ ++ ALAK VL E+P Q + F S+ + P P ++ Sbjct: 302 ASKYYILLILTDGVVTDIGETRDAIVEASRLPMSVIVVGVGNADFTDMRTLDSDDGILLSTHGQCAARDIVQFVPFRDFKKAPAS---ALAKCVLAEVPKQVVEFYASQGVGPEPHKQ 416
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Match: UPI000B45C43F (copine-8-like isoform X1 n=4 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45C43F) HSP 1 Score: 124 bits (312), Expect = 3.030e-31 Identity = 71/131 (54.20%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 1 GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDLDSDNEKLMSLSGKVAVRDVVQFVPFNDFQGRD-----STSQHALAKHVLQEIPSQFLSFMKSKNILPSPRRRLSPLTGAG 378 G Y VL I+TDG I D+ T +AIV +S LPLSI++VGVGN +F M LD+DN+KL S GK AVRD+VQFVPF DF G SQ ALAK VL EIP QFL +MK+ NI P P + + G G Sbjct: 276 GNNYFVLLILTDGVITDLPNTIEAIVHSSGLPLSIIIVGVGNAEFDAMDVLDADNQKLSSR-GKQAVRDIVQFVPFRDFLGGKFGNNMQVSQAALAKEVLAEIPDQFLQYMKANNIKPKPPQENVRMPGQG 405 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig781.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig781.1.1 >prot_C-tenellus_contig781.1.1 ID=prot_C-tenellus_contig781.1.1|Name=mRNA_C-tenellus_contig781.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=126bp GQKYCVLCIITDGRIHDINETRDAIVEASSLPLSIVVVGVGNHDFTPMRDback to top mRNA from alignment at C-tenellus_contig781:232..1439+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig781.1.1 ID=mRNA_C-tenellus_contig781.1.1|Name=mRNA_C-tenellus_contig781.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1208bp|location=Sequence derived from alignment at C-tenellus_contig781:232..1439+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig781:232..1439+ >mRNA_C-tenellus_contig781.1.1 ID=mRNA_C-tenellus_contig781.1.1|Name=mRNA_C-tenellus_contig781.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=378bp|location=Sequence derived from alignment at C-tenellus_contig781:232..1439+ (Choristocarpus tenellus KU2346)back to top |