mRNA_C-tenellus_contig7805.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: D8LJZ4_ECTSI (G-protein coupled receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ4_ECTSI) HSP 1 Score: 305 bits (781), Expect = 1.490e-98 Identity = 153/260 (58.85%), Postives = 184/260 (70.77%), Query Frame = 1 Query: 1 LGSYESEVVLIASQVGAGLSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLL 780 L S E + +L A+Q A SL+GSL ++ C AR++ LRKLSF LV +LA++DVGADI+YFMGNP C QGALQQFFQ+AQILW V IA VL +VT LRMYHP EQ LMR+FH+ VWG A + LLPFTT SYG+TG+WCWI +D D GT+WRY Y PLW I++NI +YVRI V+RRFS EI G S+V P EQQ RM KF KRL WYPAV+I WTF TINRIQN +DP++P+F L LL Sbjct: 6 LSSSEQDGLLAAAQACATFSLLGSLFIIFCYARYKHLRKLSFTLVLFLAISDVGADITYFMGNPEDNRAACVAQGALQQFFQMAQILWAVAIACVLRDVTVNLRMYHPHEQSALMRRFHVAVWGSALLSTLLPFTTDSYGSTGSWCWIETNPGSDVDVGTMWRYLVLYCPLWAAIVFNIKVYVRIFSVVRRFSTEIAGGA-----SAVGPSAEQQTRMTKFSKRLVWYPAVLIASWTFATINRIQNAIDPDHPVFGLFLL 260
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A6H5L880_9PHAE (G_PROTEIN_RECEP_F2_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L880_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.570e-62 Identity = 103/172 (59.88%), Postives = 123/172 (71.51%), Query Frame = 1 Query: 1 LGSYESEVVLIASQVGAGLSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLW 516 L S E + +L A+Q A SL+GSL ++ C AR+ LRKLSF LV +LA++DVGADI+YFMGNP TC QGALQQFFQ+AQILW V IA VL +VT LRMYHP EQ LMR+FH+ VWG A + LLPFTT SYG+TG+WCWI +D D GT+WRY Y PLW Sbjct: 99 LSSSEQDGLLAAAQACATFSLLGSLFIIFCYARYRHLRKLSFTLVLFLAISDVGADITYFMGNPEDNRATCVAQGALQQFFQMAQILWAVAIACVLRDVTVNLRMYHPHEQSALMRRFHVAVWGSALLSTLLPFTTDSYGSTGSWCWIETNPGSDVDVGTMWRYLVLYCPLW 270
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A835Z4Y8_9STRA (G_PROTEIN_RECEP_F2_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y8_9STRA) HSP 1 Score: 213 bits (542), Expect = 8.570e-60 Identity = 114/261 (43.68%), Postives = 167/261 (63.98%), Query Frame = 1 Query: 7 SYESEVVLIASQVGAGLSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQVI 789 + +++++++ +++ A +S VGS SV+L F RLR SF LV +A+AD+G+DI+Y+MGNP S C VQ +Q F Q++ +LWT +AY L V ++ P EQ ++ +H VWGVA MLLP TT +YG+TG+WCWI WRYGAFY LWL+I I YV++ + + + ++ G++Q SSV + +Q R+R+F + L YPA++IFCWT P+INRIQN +DP+NPI+ LLL QVI Sbjct: 21 TQQNDILVLMAKLCASISFVGSSSVVLSYVLFARLRTFSFHLVLMMAIADIGSDITYWMGNPEDGSPLCMVQAMMQNFCQLSVMLWTSCMAYTLLSVAVHEKVTEPAEQKRMLIIYHCYVWGVAGTLMLLPLTTDAYGSTGSWCWITVDQVG-------WRYGAFYGILWLIIAGEIVAYVQVYRRVHQMVARMEAA-GAQQGSSV---RRRQARVRRFLRSLAMYPAILIFCWTTPSINRIQNIIDPDNPIYPLLLTQVI 270
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A7S1XVJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVJ3_9STRA) HSP 1 Score: 177 bits (448), Expect = 4.320e-49 Identity = 107/267 (40.07%), Postives = 148/267 (55.43%), Query Frame = 1 Query: 13 ESEVVLIASQVGAGL-SLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGM-------LLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQVI 789 E ++ L+ VG + S + S VL A LR SF LVA LA AD+GADISYF G+P + CT+QG LQQFFQ+A +W IA L+ K R+F M W +AAVG +LP TT SYG TG WCWI T + + D GT+WR+ FY LW+ II ++ L V +A+ +RR +D+ G+ ES+ ++ +RL +YP ++I CW TINRI NT+ P +P+F L ++QV+ Sbjct: 66 EQDMALLGVSVGFAVPSFILSSIVLTSYACHTNLRTRSFLLVAQLAWADIGADISYFFGDPADGTAACTLQGILQQFFQLASFMWASIIATTLYLKLVK-------------RQFDMEFWKLAAVGWGVPGFLTILPATTDSYGQTGGWCWIKTTDKEEGDVGTVWRFVTFYLVLWVCIIVDVYLMVEVARYVRRI---VDLSGGNLGESTK--------KVLATVERLKYYPCILIVCWVPGTINRIHNTIHPTDPVFALAIIQVL 308
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: F0XVC5_AURAN (G_PROTEIN_RECEP_F2_4 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVC5_AURAN) HSP 1 Score: 158 bits (400), Expect = 3.340e-43 Identity = 90/248 (36.29%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 49 AGLSLVGSLSVLLCVARFERLR-KLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQVI 789 + LS +G L V+ F LR K +F VA +A+AD+GA ++Y+ G+P RS CT Q LQQFF+++ +LW I+ LH ++ + R + R + WG +AV LLP +TSSYG +GAWCWI R A WR+ FY P+W+ I YN +Y A VL R D G K ++ RL YP +++ CW+ TINR+Q P+ P+F L + V+ Sbjct: 10 SSLSFLGGLFVVFSFGFFPTLRSKFAFEQVAMMALADMGAALTYWFGSPRDRSGLCTSQAVLQQFFELSSVLWATVISTTLHLAMRRVEIDERRRR----RAAYAFTWGASAVFALLPLSTSSYGASGAWCWIRPRPRLPSAA---WRFSIFYVPVWIAIAYNGAVYANCAWVLERLRSVADDAAGEKLRGTIH--------------RLARYPLILVACWSCATINRLQQIFAPDRPVFGLYVATVV 236
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A7S2H8S1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H8S1_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.750e-42 Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 154 DVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVL-HEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTL 771 DV A+++YFMGN CT QG +QQFF++A ILW+ I L V + R++ R K H+ VWG++A LPF+T+SYG +G+WCWI + D +AGT WRY AFY LW++ N+ Y + + + F VS QQ +++K ++L WYP +++F WT PTI+RIQ TLDP+ +F L Sbjct: 1 DVFANVTYFMGNEL-HGGACTFQGWMQQFFELASILWSCVIGLTLWSSVVRQTRVFATR------MKLHIAVWGISAFVSFLPFSTNSYGESGSWCWI----KGD-EAGTYWRYAAFYVLLWIIFFCNVYCYSVVRKTINGFV-------------KVSVATTQQVKLKKLAEQLKWYPLILVFAWTLPTISRIQQTLDPHCDVFWL 182
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A7S2TMP9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TMP9_9EUKA) HSP 1 Score: 148 bits (374), Expect = 1.310e-38 Identity = 84/245 (34.29%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 55 LSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQVI 789 +S GS ++ R +LR F+LV W++ +D+ I+ +GNP+ S C Q + QFF ++ +LWTVTIAY + V K R +I + FH +VWG++ + +LP TT +YG + WCWI A+ AGT WR+ FY PLWLV YN+++Y + R ++ V +G + +++ Q R+ +YP V++ C+ F TI+RIQ P P++ L++L I Sbjct: 42 ISFCGSSFIVFMYIRHPQLRSFVFQLVVWISASDIMYSIANAIGNPSDGSAACYTQAIMIQFFGLSSMLWTVTIAYTVDRVYLKGRSIEEAAEI--KKTFHYIVWGISLLLTILPATTGNYGQSTGWCWIDVKENAE--AGTAWRFVTFYIPLWLVAGYNLSVYAHV-----RSALNAAVEQGGENAGNIAGLQ-----------RMVYYPLVLVVCYIFGTISRIQQIFGP--PVYGLVILHTI 264
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A0D6R682_ARACU (G_PROTEIN_RECEP_F2_4 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R682_ARACU) HSP 1 Score: 145 bits (367), Expect = 1.080e-37 Identity = 92/260 (35.38%), Postives = 137/260 (52.69%), Query Frame = 1 Query: 13 ESEVVLIASQVGAG-LSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQD-RMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQV 786 E + +L VGA LSL GS ++LC +F+ LRK SF+LV +LA++D+ +G+P + C QG FF VA LWT TIA+ LH + H + L FH+ VWG + V +++P YG TG WCW+ T +A G + ++ FY PLW I++N Y ++ ++L ++ + +S Q Q D R+ K R +YP ++I WTF T+NRI + +DP + IF L L V Sbjct: 8 EQKHILTVVNVGASALSLAGSAFIVLCYLQFKELRKFSFKLVFYLALSDMFCSFFNILGDPA-KGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVR----HKTDVEELGSIFHLYVWGTSLVMIIIPSIGDGYGQTGVWCWVQTTAKA----GKVLQFITFYAPLWGAILFNGFTYFQVIRMLNN---------ATRMAAGMSDRQLQVDARVDKALNRWGYYPLILIGSWTFATLNRIHDFIDPRHKIFWLSFLDV 249
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A7S2F7C4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7C4_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.830e-37 Identity = 94/262 (35.88%), Postives = 139/262 (53.05%), Query Frame = 1 Query: 4 GSYESE---VVLIASQVGAGLSLVGSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLV---WGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTL 771 GS+ SE ++L A+ + +S GSL V+ RF LR SF LVA+LAVAD+G D+ YF+G+ N CT+Q ++ +F +A I TV IA+++H V EQ RK + WG+ A+ LPFTT +YG GAWC I T + AG +W + + P WL I YN+ +Y+ + +V+R + + E S +Q+ +F +RL YP V++ WT+ TI Q L+P+ IF L Sbjct: 6 GSFSSEQERMLLKAAIYCSTVSCFGSLVVIASYVRFPHLRGFSFMLVAYLAVADLGTDVVYFLGDYNTGDNICTLQAVMRVYFNLAAIFLTVVIAHLMHAVIVDRNFDVEHEQ----RKLPTYIIFSWGLPAIFAALPFTTGNYGNNGAWCSITPGT-GSYWAGVMWIFVCIFVPCWLAIGYNVTVYLTVNRVVR--GLHMSHSMSEMDEYSRRTHLKQRANQNQFVERLQLYPLVLVVSWTWVTIYCFQAMLEPDQHIFWL 260
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Match: A0A2R6WMW1_MARPO (G_PROTEIN_RECEP_F2_4 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WMW1_MARPO) HSP 1 Score: 141 bits (356), Expect = 4.100e-36 Identity = 82/240 (34.17%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 67 GSLSVLLCVARFERLRKLSFRLVAWLAVADVGADISYFMGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREQIILMRKFHMLVWGVAAVGMLLPFTTSSYGTTGAWCWIAATTRADFDAGTLWRYGAFYFPLWLVIIYNINLYVRIAQVLRRFSVEIDVGRGSKQESSVSPPQEQQDRMRKFGKRLFWYPAVMIFCWTFPTINRIQNTLDPNNPIFTLLLLQV 786 GS ++LC F+ LRK SF+LV +L+++D+ + +G+P C VQG QFF VA LWT TIA+ L+ K H + FH VWG A + ++P YG GAWCW+ R + AG + R+ FY PLW I++N +Y ++ ++L+ ++ + V +Q + P + M ++G +YP ++I WTF TINRI + ++P N +F L L + Sbjct: 26 GSFFIVLCYLCFKELRKFSFKLVFYLSLSDMLCSLFNLLGDPR-EGFLCYVQGYSTQFFSVASFLWTTTIAFTLYRTVVK----HKADVEEFGPAFHAYVWGTAFLMTIIPSIGDDYGPAGAWCWV----RTETTAGKVLRFMTFYVPLWGAILFNGAVYFQVIRMLK-YATRMAVSMADRQRQVEARP--EMKAMNRWG----YYPLILIASWTFGTINRIHDFVEPQNKLFWLYCLHI 249 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7805.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7805.1.1 >prot_C-tenellus_contig7805.1.1 ID=prot_C-tenellus_contig7805.1.1|Name=mRNA_C-tenellus_contig7805.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=210bp MGNPTPRSNTCTVQGALQQFFQVAQILWTVTIAYVLHEVTTKLRMYHPREback to top mRNA from alignment at C-tenellus_contig7805:1291..3168- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7805.1.1 ID=mRNA_C-tenellus_contig7805.1.1|Name=mRNA_C-tenellus_contig7805.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1878bp|location=Sequence derived from alignment at C-tenellus_contig7805:1291..3168- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7805:1291..3168- >mRNA_C-tenellus_contig7805.1.1 ID=mRNA_C-tenellus_contig7805.1.1|Name=mRNA_C-tenellus_contig7805.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=630bp|location=Sequence derived from alignment at C-tenellus_contig7805:1291..3168- (Choristocarpus tenellus KU2346)back to top |