mRNA_C-tenellus_contig780.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: D8LB87_ECTSI (Similar to Dynein light chain Tctex-type 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB87_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.310e-32 Identity = 52/94 (55.32%), Postives = 77/94 (81.91%), Query Frame = 2 Query: 185 SLAQLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACSL 466 +++++L+ LQ KY AS +EW++AICSQT+AAL++++ +FKYTATCV+ QKTGGG+HT SAAC+EP DGC++ERW++ ++ I+ VF CSL Sbjct: 19 AISKVLDVTLQDRKYDASSVEEWSDAICSQTLAALRSISGSFKYTATCVLTQKTGGGLHTSSAACYEPSTDGCVVERWENQSILAIVVVFGCSL 112
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A835YG30_9STRA (Tctex-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG30_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.270e-19 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 185 SLAQLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACS 463 ++ QLL++ L+G+ Y+ +EW + S V ALQ L+ FKY ATC I QK GGG+H+ SAA W+P RDGC W+ M+ + FA S Sbjct: 22 AITQLLDETLKGQAYEPDAAKEWAAKLSSGAVTALQGLSQHFKYIATCTIAQKCGGGLHSESAASWDPARDGCCDVAWEGDGMSATVVAFATS 114
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A7R8WBZ9_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WBZ9_9CRUS) HSP 1 Score: 89.0 bits (219), Expect = 6.460e-19 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 203 EQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVF 454 E L Y A + Q+WTN++ + + L L FKY TCVI QKTGGGVHT S W+P DG RWD+ TM C+++V+ Sbjct: 26 ENTLGQNSYNAGKMQQWTNSVTEKVLQQLAKLQKPFKYVVTCVIIQKTGGGVHTASTCFWDPTTDGVCNVRWDNKTMLCLVSVY 109
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A4E0QUZ9_FASHE (Cytoplasmic dynein light chain n=2 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0QUZ9_FASHE) HSP 1 Score: 80.9 bits (198), Expect = 9.270e-16 Identity = 31/91 (34.07%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 194 QLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACSL 466 +++ ++ + A++ ++WT+ I Q+++ L LN FKY +CV+ Q+ G G+ TGSA W+ DGC +W++ +M C +TVF S+ Sbjct: 30 EIIGNVVGASDFSANKIKQWTSTIIEQSISQLARLNRPFKYIVSCVMMQRNGAGLQTGSACYWDSSTDGCYTLKWENKSMYCFVTVFGISI 120
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A7S2UUF8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.720e-12 Identity = 29/90 (32.22%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 200 LEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSA-ACWEPERDGCILERWDSPTMTCIITVFACSL 466 L +L+G+++Q ++ EWT+ + + +A L L+ FKYT +C++F+K G T + A W+P DG RW++ +M+C++ + +L Sbjct: 30 LTSVLEGKRFQTTKLAEWTDLVTQECLAGLARLSRNFKYTVSCLLFEKEQGAQMTSAVTAYWDPRTDGSFTLRWENDSMSCVLVISGYAL 119
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A0R3VWQ9_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3VWQ9_TAEAS) HSP 1 Score: 69.7 bits (169), Expect = 8.390e-12 Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 2 Query: 194 QLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACSL 466 +++ L +++++ W + I Q + L LN FKY TCVI QK G ++TGS W+ DG +W++ +M C++T F ++ Sbjct: 8 EIVTNTLTNNNFESTKINSWASEITEQCLHQLTKLNRPFKYLVTCVIMQKNGSSLYTGSTCYWDATTDGNCTVKWENESMHCVVTCFGLAI 98
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: M2Y6L9_GALSU (Dynein light chain Tctex-type 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6L9_GALSU) HSP 1 Score: 70.5 bits (171), Expect = 1.490e-11 Identity = 30/91 (32.97%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 194 QLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACSL 466 +++E + EKY+ ++T EWTN +C + +A L L FKY +C + QK G G HT + W+ + D C + ++ + I T++A S+ Sbjct: 58 EIIESTVGEEKYEHTKTVEWTNQMCEKILAKLLELQKPFKYIVSCSLLQKKGAGFHTATTCYWDADCDQCCTIKHETKHLHVICTIYAVSI 148
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: W6U5D5_ECHGR (Dynein light chain Tctex-type n=1 Tax=Echinococcus granulosus TaxID=6210 RepID=W6U5D5_ECHGR) HSP 1 Score: 67.8 bits (164), Expect = 6.570e-11 Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 2 Query: 212 LQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACSL 466 L K ++++ W + I Q + L LN FKY TCVI QK G ++TGS W+ DG +W++ +M CI+T F ++ Sbjct: 30 LTNNKLESAKMNAWASEITEQCLHQLTKLNRPFKYLVTCVIMQKDGTSLYTGSTCYWDATTDGNCTIKWENGSMYCIVTCFGLAI 114
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Match: A0A8E0RPC4_9TREM (Uncharacterized protein n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RPC4_9TREM) HSP 1 Score: 53.9 bits (128), Expect = 1.670e-5 Identity = 23/90 (25.56%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 194 QLLEQMLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVHTGSAACWEPERDGCILERWDSPTMTCIITVFACS 463 +++ ++ ++ ++ ++WT+ I Q+++ L LN FKY +CV+ Q+ G G+ TGSA W+ D + C++ + + S Sbjct: 16 EIIGNVVGASEFSPTKIKQWTSTIIEQSISQLARLNRPFKYIVSCVMMQRNGAGLQTGSACYWDSSTDALWM------LYECLVQIVSIS 99 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig780.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig780.5.1 >prot_C-tenellus_contig780.5.1 ID=prot_C-tenellus_contig780.5.1|Name=mRNA_C-tenellus_contig780.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=87bp MLQGEKYQASRTQEWTNAICSQTVAALQTLNDTFKYTATCVIFQKTGGGVback to top mRNA from alignment at C-tenellus_contig780:7767..8859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig780.5.1 ID=mRNA_C-tenellus_contig780.5.1|Name=mRNA_C-tenellus_contig780.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1093bp|location=Sequence derived from alignment at C-tenellus_contig780:7767..8859+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig780:7767..8859+ >mRNA_C-tenellus_contig780.5.1 ID=mRNA_C-tenellus_contig780.5.1|Name=mRNA_C-tenellus_contig780.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=261bp|location=Sequence derived from alignment at C-tenellus_contig780:7767..8859+ (Choristocarpus tenellus KU2346)back to top |