|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1991 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 1173 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790058.297595-UTR-C-tenellus_contig7780:1314..1347 | 1680790058.297595-UTR-C-tenellus_contig7780:1314..1347 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig7780 1315..1347 + |
| 1680790058.35477-UTR-C-tenellus_contig7780:4793..5578 | 1680790058.35477-UTR-C-tenellus_contig7780:4793..5578 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig7780 4794..5578 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790058.3078234-CDS-C-tenellus_contig7780:1347..1592 | 1680790058.3078234-CDS-C-tenellus_contig7780:1347..1592 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7780 1348..1592 + |
| 1680790058.318414-CDS-C-tenellus_contig7780:1745..2341 | 1680790058.318414-CDS-C-tenellus_contig7780:1745..2341 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7780 1746..2341 + |
| 1680790058.3296356-CDS-C-tenellus_contig7780:3203..3374 | 1680790058.3296356-CDS-C-tenellus_contig7780:3203..3374 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7780 3204..3374 + |
| 1680790058.3397226-CDS-C-tenellus_contig7780:4632..4793 | 1680790058.3397226-CDS-C-tenellus_contig7780:4632..4793 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig7780 4633..4793 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7780.1.1 >prot_C-tenellus_contig7780.1.1 ID=prot_C-tenellus_contig7780.1.1|Name=mRNA_C-tenellus_contig7780.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=391bp
MRESQDKEDDWVCLVGNRKILPPPFSGHDLGGRNWSHLWRASLSALRAKG
RKPFVDTNPKPPIPRLLSRPKGQDTKLSGGTWEPVTLALKTLPFIKQDKL
LQIIELAKKNSLCPPTSGDCSSMSNKFRVKEPSTEHEIRDAGDSVSGIVR
EYRCLEERRQQSGGTQQGTGRRDQRAIDCVQDQGNSCTREMLCGPYHILN
KKGCVQGSRVEKKLPSEAKKRTRRGDHGSSWHVAGSTAKGPEQKQQFTLH
PQAAGLVFKVARVCRKYAAAGRLKRVVDGEGQKKRVMTKPEFGRFLDLDL
SVTVTAQEVDILLTAFPRPGNSRLVDVARFLLLVENPSLISVEQGNANNI
EGSTARVTEEDPTDTPSNLPAAKFLQEQQTLMTGRLPPLA* back to topmRNA from alignment at C-tenellus_contig7780:1315..5578+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig7780.1.1 ID=mRNA_C-tenellus_contig7780.1.1|Name=mRNA_C-tenellus_contig7780.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4264bp|location=Sequence derived from alignment at C-tenellus_contig7780:1315..5578+ (Choristocarpus tenellus KU2346)
TGGTCGACTTCTCAGTTAGATGGCTATTATAAAATGAGGGAGAGTCAGGA
CAAGGAAGATGACTGGGTCTGCTTGGTGGGAAACAGGAAGATTCTCCCTC
CGCCATTTTCAGGACATGACTTGGGTGGTCGAAACTGGTCACATCTTTGG
AGGGCAAGTCTATCAGCCCTTCGTGCTAAGGGTCGGAAGCCATTCGTCGA
CACCAACCCCAAACCGCCAATCCCTCGACTTCTTTCACGACCCAAAGGCC
AAGACACTAAACTGTCAGGGGGGACATGGTAAGTGAATCGCAATGCGTCT
ACCGAAGTGGAGGTGGAGCAAAGTGCCTAATGAATGGGACCTAAAATAAG
TTGTTCTATGCTCAAGTTCCTCACTATCACTAATACGGAGAGTATTCATT
TGAGTCCTGCCCTACCATTCACGCACAACAGGGAGCCGGTGACACTAGCA
TTAAAAACACTCCCGTTCATTAAACAAGACAAGCTACTGCAGATTATTGA
ACTCGCCAAGAAGAACAGTCTATGTCCACCTACCTCTGGTGACTGTTCTT
CCATGAGTAATAAATTCAGGGTGAAAGAACCCTCAACAGAACACGAGATA
AGAGATGCAGGAGATTCAGTAAGCGGAATAGTACGGGAGTATCGTTGCTT
AGAGGAGCGAAGGCAGCAAAGTGGTGGCACTCAACAGGGTACGGGTCGAA
GAGACCAAAGAGCTATAGACTGCGTCCAAGATCAAGGTAATTCCTGTACC
AGAGAAATGCTTTGCGGCCCCTATCATATCCTAAACAAGAAAGGATGTGT
TCAAGGGAGCAGGGTTGAGAAAAAGCTACCAAGCGAGGCCAAGAAAAGAA
CAAGAAGGGGAGACCATGGAAGCAGCTGGCATGTAGCAGGATCAACAGCT
AAGGGACCAGAGCAGAAGCAACAATTTACACTTCACCCCCAGGCCGCAGG
GCTGGTGTTTAAGGTCGCCAGGGTTTGTCGCAAGTATGCTGCTGCAGGTC
GACTGAAGAGAGTGGTGGATGGAGAAGGCAAGTGCCTGGAGAGTATGTCA
CACAATGTGCAAATGCACGGGTCAGAGGGCTTGGGCTTTGGCATTATCTA
GGTCATTATCTAGGGAGAATATAACTGGTGAGGCACTCGATCTTGAACAT
CAAAGAGAGTGTTGACTGTGTCATATACTGCTAGATCTGGCACGGTCATT
CTACTTTTTGATACCAAGTCAGAGTACAAACCAATCTCTATAGGGTCACT
TTTAATTTTTGGGTGTTGATATGGGATTTCAGATATTATGACTATCTAGT
CAAGCAGGTGCTACAGTGGAGAGATTATTGATTGCACATGGGCTTCTACT
CTAGAATCAAATGCTTAACATGTACCAAAGTTTTATATATACAAACCTTT
TGGGGGGGCGAGCCACCAATTCATTTCTAACATTCCCACTTTCTGCTGAC
TTGGACATTGACAGTCAGCAGCACAATATGATGTTATGTATTCTCCCTGA
ACAGTACAGGTAATTCCACATACACCGTCAACTGTTTTTTCTCATTCATC
TCTTAACACTGACTAAACTAAACCCCTATCTTTAACACTGAAATGTACTC
TTTGAGTATTTAGTATGTGGCAAAACTTGGATGTTGATATTTTAAGTGTT
CCCAAGGGCATGCTTGTGTGGTATATCTCACATCTGCATGCACATGTAGA
TCATTCTTGTAGGACATGGACCATTGACTTCTCATTGGCCAGTTTCGGTT
TTGATAGGTAGATGTGCACTTGGCAGGGCTGGGTAGAGGTCTTGAGACTT
GGCACATTGCACTTCATACCTCCAAATATTTCTGTGTGAGGCCTGTGGGT
ACCCTCTCCCTCTGTATTACACTTATCTGTGGCATGCAGGTCAGAAGAAG
AGAGTCATGACCAAACCAGAATTTGGACGTTTTCTAGACCTTGATCTCTC
AGTGACTGTCACGGCACAAGAAGTGGACATCCTCCTTACCGCCTTTCCAA
GACCAGGGAACTCTCGTCTGGTAGATGTGGCACGCTTCCTGCTTCTTGTG
GAAAACCCAAGTGAGAACTCCTGAGTGAGGGCACTTGAAAGTCCAAGGTT
ACCATGGTTATATTATTGCTGCCGTTAGCCTATCTTTGGAAGTTGTGCTC
CCACGGTCAAATACATGAGGAGATTGCCTGAATTTGACCTGGACTCTCTC
AGTTCCACCAATCTCAGACCTCATCCCAGACATTATTTTCGTATCAGAAC
ACAGGACCATAAAGGTATGTATGGCCAATCCTATCTCATTCTCATCGCCC
CAATGTTCTACCTCAAACCCACGTGGGTGGGGTGTGCTACTCTGCACATG
TTCCAATCCAAGGACCTCTGTGTTTAATTCCAAGCGACCTAGAGGGACTG
TTGTCCGAGAGCTTATTAACATCTTGACAGCTTTTTCGCAACTGTCAAGG
GGGAGTAAACCCTAGTGTGGTTCCTTTGCTCCTTGCTTTTCAGTAGTCAA
GACACCAATCAGTCGAACTGTTGAAGAATTGGGTCACAGAAGGTGACTGG
CCTTGGGCAGGTGATTCAGCAGCACGCACTCTAGCCCTGTCACTGTGTCA
CTCTAGGGTGATTTCAGGTTTCTTTCTCCTTGAGGCATGCACAAGGTTGG
AAATAGACGCTGTAATTTCAACTCTCATTTTTTTTATTGTTTCCATACTT
GCAGAGAGTTGGGTTGAGGACCTCGAGTATATGTGCATAGGACAGCAAGC
TATTGCTGGGTATCTTCATGAGACTTTGGATTCGTGATGCAGGCTCATTC
CTGGATACTGTATCCTTGGGGGCAAATTTCAATCTGCGCAGACTACTTCT
TAATCAGCAACCTTGCTTAGAGATACCTATTTGTCTCATGTGCCACTCGA
GAATGCATGATGTCTTAGTCTACAACAGTGCTGTCATTTCCTTCTTGATG
GTCATAGTGCATTCATCGGTCTAGTGTGGGGCAAGTACCAAGAAGTCCCC
ATCCGTGATACCACTACAGCATTTGTGTAGCTTGTCTTCACCAGGGTGCT
ACATGTAGGACAAACAAATTCATACTCAAAACAGCTGGAAAAGCTGGAGG
GTGTTTCCTCACTGTAGAAAAAATAACCTCCTAGAATACTGACAACAGAA
AATCCATGTTGGCTTTGTCCTCAAACAGGGCAACTATGATAGACTATGAT
GTCATGGTTTATCTGAAGCTCATTACAACAACTACTCCTTTGCAATTCTT
TCCCCATATCTAAACATTATACCCTTTTCTGATGTATTGCACACACTTGC
CTCACTCGGAACAACAAGGCCTCATATCAGTGGAACAAGGCAATGCTAAT
AATATAGAAGGGTCGACTGCAAGAGTCACTGAGGAGGACCCAACAGACAC
GCCATCAAACCTGCCCGCTGCAAAATTTCTACAAGAACAACAAACTCTCA
TGACAGGTCGTCTGCCTCCACTGGCATAGGATGTCCACTTGATATTGAAT
TGTTTAGGCATAGGCTACCACATTTTGTCGTCTCAGCCCACCATGCCTGA
CCATGACTGCTAGAACCCCCAGGGAGTGCTGAGGAGATATGATGGTGTAC
GCCAATAGTGGCCATGGCAAGACAGTTGCTGGTTTGTTCCTGGGTGAGGA
AGCTTAATCACAAGAACAGTTCTGGATGGTAATCCTGATGAAAAGTTGAT
GTCATGTCCTGTTTGTTGCCCATGCCATTACAAGGTCAGCCACACATTAT
TAGGGAGAGTGTAGTAGAGTTCTATTTGAGCCTTTTTGGATATGTTATGT
TCAACTTCCTCGAGGAACTCAGTCCAGAGAAGTGTGTTACCGGGAATGTT
CACAAAGAATACCTCATTTTTTTATTGAGGGCACTACCATTAGCCTTAAC
CCTGGACACTGTTTCCAGGTTTCCAGCAGCTATATCCATGAGCACAGTGA
AGGGTGAGTGATACTCTTTCTTGGACAATAGGCCAATTCTGTTTGAGAAG
TATACTTTATTTGACAGGAAGTCTTGCTCCAAAGGCAAGAACATAGAACT
ATTGCTGGCAGGTAGAATAGCAATATAGGAGCTCAGGCATGAATATAAGT
AGGTTCTTGGTCCATAGAACTTTGAGTGTCACATTGTTGTCTCATTACCG
GACTGTAAGAGATACTTTTGTATATCCCATGCATGACTGCAATGCCTTGG
ATTACACGTTTGAAAGCCACAGCAAGGATGAAAGCCTTCGCCATTGCCTA
AATGCTTGTTTGAG back to topCoding sequence (CDS) from alignment at C-tenellus_contig7780:1315..5578+ >mRNA_C-tenellus_contig7780.1.1 ID=mRNA_C-tenellus_contig7780.1.1|Name=mRNA_C-tenellus_contig7780.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1173bp|location=Sequence derived from alignment at C-tenellus_contig7780:1315..5578+ (Choristocarpus tenellus KU2346)
ATGAGGGAGAGTCAGGACAAGGAAGATGACTGGGTCTGCTTGGTGGGAAA
CAGGAAGATTCTCCCTCCGCCATTTTCAGGACATGACTTGGGTGGTCGAA
ACTGGTCACATCTTTGGAGGGCAAGTCTATCAGCCCTTCGTGCTAAGGGT
CGGAAGCCATTCGTCGACACCAACCCCAAACCGCCAATCCCTCGACTTCT
TTCACGACCCAAAGGCCAAGACACTAAACTGTCAGGGGGGACATGGGAGC
CGGTGACACTAGCATTAAAAACACTCCCGTTCATTAAACAAGACAAGCTA
CTGCAGATTATTGAACTCGCCAAGAAGAACAGTCTATGTCCACCTACCTC
TGGTGACTGTTCTTCCATGAGTAATAAATTCAGGGTGAAAGAACCCTCAA
CAGAACACGAGATAAGAGATGCAGGAGATTCAGTAAGCGGAATAGTACGG
GAGTATCGTTGCTTAGAGGAGCGAAGGCAGCAAAGTGGTGGCACTCAACA
GGGTACGGGTCGAAGAGACCAAAGAGCTATAGACTGCGTCCAAGATCAAG
GTAATTCCTGTACCAGAGAAATGCTTTGCGGCCCCTATCATATCCTAAAC
AAGAAAGGATGTGTTCAAGGGAGCAGGGTTGAGAAAAAGCTACCAAGCGA
GGCCAAGAAAAGAACAAGAAGGGGAGACCATGGAAGCAGCTGGCATGTAG
CAGGATCAACAGCTAAGGGACCAGAGCAGAAGCAACAATTTACACTTCAC
CCCCAGGCCGCAGGGCTGGTGTTTAAGGTCGCCAGGGTTTGTCGCAAGTA
TGCTGCTGCAGGTCGACTGAAGAGAGTGGTGGATGGAGAAGGTCAGAAGA
AGAGAGTCATGACCAAACCAGAATTTGGACGTTTTCTAGACCTTGATCTC
TCAGTGACTGTCACGGCACAAGAAGTGGACATCCTCCTTACCGCCTTTCC
AAGACCAGGGAACTCTCGTCTGGTAGATGTGGCACGCTTCCTGCTTCTTG
TGGAAAACCCAAGCCTCATATCAGTGGAACAAGGCAATGCTAATAATATA
GAAGGGTCGACTGCAAGAGTCACTGAGGAGGACCCAACAGACACGCCATC
AAACCTGCCCGCTGCAAAATTTCTACAAGAACAACAAACTCTCATGACAG
GTCGTCTGCCTCCACTGGCATAG back to top
|