mRNA_C-tenellus_contig7776.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: D8LGR4_ECTSI (Domain repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR4_ECTSI) HSP 1 Score: 275 bits (702), Expect = 1.540e-85 Identity = 144/259 (55.60%), Postives = 172/259 (66.41%), Query Frame = 1 Query: 1 EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVG--YEAFSLGAGPCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 E A G+ H CV+LD+ +KCFG N+YGQLG GDT RG + +MG+++ AVDLGTG TVV HTCA+L+D SLKCFG+N+ GQLGL DT++RGDE EMGD LPAV+LG RTAV+V A GD TCV+LD V CWG EYG LG G D T N G VDLGV ++G GPCAVF G +KCWG+G YG +G G D GDE GEMGE+LP V G G L ISGGRD+ C +L GG+K Sbjct: 26 EALAVGTDHACVLLDDATVKCFGQNNYGQLGLGDTDDRGQSAGTMGDSLTAVDLGTGATVVAMSAGSDHTCAVLADGSLKCFGRNNMGQLGLDDTDDRGDEAFEMGDDLPAVSLGTNRTAVAVSAQGDRTCVLLDNGNVRCWGDAEYGALGGG---DETTTGNGDGTIADSVDLGVNGTNTVGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPTVPLGEGVLVESISGGRDYQCAVLQDGGLK 281
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 238 bits (607), Expect = 1.650e-72 Identity = 125/257 (48.64%), Postives = 150/257 (58.37%), Query Frame = 1 Query: 10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 + G HTCV+LDN +KC+GAN GQLG GDT RG MGN + AV LGTG T HTCA+L + S+KC+G N+ GQLGLGDT++RGD P EMGD LPA+ LG GRTA ++ G TC +LD V CWG YG LGLG T D G +G +L + LG G A ++ G CA+ G IKCWG YG GLGD RGD GEMG+ LP + G G IS G C +L G VK Sbjct: 48 SVGQLHTCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVK 304
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848LCV5_9DELT (Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LCV5_9DELT) HSP 1 Score: 241 bits (615), Expect = 2.120e-70 Identity = 128/258 (49.61%), Postives = 160/258 (62.02%), Query Frame = 1 Query: 7 FATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 FA G HTC +LDND LKC+G N +GQLG GD +RG P ++G+ + VDLGTG T HTCAIL D S+KC+G N GQLGLGDT +RGD+P EMGDALP V+LG GRTA ++ A G++ C ILD V CWG G LGLG TE G +G +L +V+LG G A +L AG CA+ +KCWG G+ GLGD+ +RGD GEMG+ LP V G G + T ++ G C L GG+K Sbjct: 590 FAAGGAHTCAILDNDTLKCWGLNAWGQLGLGDHENRGDRPGNIGDWLSPVDLGTGRTARGLAAGGAHTCAILDDGSVKCWGDNQYGQLGLGDTRSRGDDPGEMGDALPPVDLGTGRTAKTLAAGGNYVCAILDDGTVKCWGDNRSGTLGLGDTEARGDDPGEMGDALPLVELGTGRIAMALAAGVSHVCALLDDASVKCWGDNRSGSLGLGDIANRGDAPGEMGDALPPVSLGTGRIATSLTAGTH-TCASLDDGGIK 846
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT) HSP 1 Score: 231 bits (588), Expect = 9.830e-68 Identity = 120/251 (47.81%), Postives = 154/251 (61.35%), Query Frame = 1 Query: 10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753 A G HTC VL++ LKC+G ND GQLG G + G +P MG+ + AV LGT T V HTCA+L+D S+KC+G ND GQLGLGDT +RG + +MGD+LPAV LG G++A++V A+G TCV+L+ V CWG YG LGLGS GT + +G +L V+LG G A + AG CAV + G +KCWG YG GLGD +RG + MG+NLP V G G T +S G C +L Sbjct: 330 AAGDNHTCAVLNDGTLKCWGVNDSGQLGLGGMTAVGTSPSHMGDNLPAVALGTAKTAVAVSAAGEHTCAVLNDGSVKCWGNNDSGQLGLGDTLSRGGDTAQMGDSLPAVALGTGQSAIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSPASRGTSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRGTGSTSMGDNLPVVNLGTGKTATLVSAGGRHTCAVL 580
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A150G0E4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0E4_GONPE) HSP 1 Score: 220 bits (560), Expect = 1.900e-67 Identity = 121/252 (48.02%), Postives = 147/252 (58.33%), Query Frame = 1 Query: 10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDF-TCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753 A G+ HTC +LD +KC+G GQLG GDT +RG P MG+ + VDLGTG T V HTCA+L + KC+G N+ QLG GDTNNRGD P EMGD+LP V+LG GRTAV+ MA G+ TC +LD + CWG G LG G T G +G SL VDLG G A + AG CAV KCWG +G G GD++ RGD GEMG+NLP+V G G ++ G NC IL Sbjct: 35 AAGAYHTCAILDTARVKCWGRAANGQLGYGDTNNRGDNPGEMGDNLPFVDLGTGRTAVVLAGGHYHTCAVLDNGRAKCWGWNNAAQLGYGDTNNRGDNPGEMGDSLPFVDLGTGRTAVA-MAGGELHTCAVLDNGRAKCWGVSSLGQLGYGDTSIRGDNPGEMGDSLPYVDLGTGRTAVVITAGTYHSCAVLDNARAKCWGPYYFGQLGYGDLNTRGDGPGEMGDNLPYVDLGTGRTAVALATGAYHNCAIL 285
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 234 bits (598), Expect = 6.310e-67 Identity = 127/257 (49.42%), Postives = 152/257 (59.14%), Query Frame = 1 Query: 10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 + GS HTC +LDN ++KC+G NDYG LG GDT RG MG+ + AV LGTG T HTCA+L + S+KC+G N GQLGLGDT+ RGD P EMGD LPAV LG GRTA ++ A TC +LD V CWG +YG LGLG T G +G +L V LG G A ++ AG CA+ G +KCWG YG GLGD RGD GEMG+ LP V G G T IS G + C +L G VK Sbjct: 1573 SVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNELGEMGDRLPAVALGTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVK 1829
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A4U1HXX6_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HXX6_9DELT) HSP 1 Score: 223 bits (567), Expect = 1.080e-66 Identity = 122/262 (46.56%), Postives = 156/262 (59.54%), Query Frame = 1 Query: 1 EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMAS--GDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 + A G H+C +L + LKC+G N GQLG GD RG P MG+ + AVDLGTG + V +CA+L+D ++KC+G + +GQLG GDT RG P +MGDALPA+NLG G AV+V AS G F C +L V CWG G LGLG T G +G +L VDLG G +A ++ G CA+ +KCWG+G+YG GLGD + RGDE GEMG+ LP V G GG+ I+ G NCV+L G VK Sbjct: 40 KALAVGGFHSCALLSDGRLKCWGHNYGGQLGVGDENIRGDEPGEMGDQLPAVDLGTGKSPVAISLGQYFSCALLNDGTVKCWGDSYRGQLGQGDTQRRGGAPNQMGDALPAINLGTGAIAVAVSASTSGGFACALLQGGAVKCWGENFKGQLGLGDTNHRGDEPGEMGDALPAVDLGTGKKAIAIVTGYSNACALLDDFSVKCWGEGLYGQLGLGDKNGRGDEPGEMGDALPAVDLGTGGIVHAIAAGAAHNCVLLSTGRVK 301
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 225 bits (573), Expect = 3.510e-66 Identity = 117/249 (46.99%), Postives = 151/249 (60.64%), Query Frame = 1 Query: 16 GSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753 G+ HTC +L+N ++KC+G ND GQLG GDT SRG MG + +VDLGTG T TCAIL +SS+KC+GKND+GQLG G+TN+ GD EMGD L ++LG GRTA ++ G C ILD + CWG G LG+GST+D G AN +G +L +DLG G A ++ AG CA+ +KCWGK G GLGD ++RGD A EMG++L V G G I+ G C +L Sbjct: 192 GAYHTCTILENSSVKCWGKNDSGQLGLGDTNSRGDGANEMGANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGNTNSLGDAGSEMGDNLTPIDLGTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALL 440
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848LHZ3_9DELT (Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LHZ3_9DELT) HSP 1 Score: 224 bits (571), Expect = 5.780e-66 Identity = 124/257 (48.25%), Postives = 155/257 (60.31%), Query Frame = 1 Query: 10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 A GSG+TC +LD+ ++KC+G N +GQLG GDT SRG P MG+A+ VDLG G T HTCA+L D S+KC+G N+ GQLGLGDT RGD P EMGDALP V LG GRTA +++A G TC +LD + CWG EYG LGLG T G + +L V+LG G A +L G CA+ +KCWG+ +G GLGD +DRG +MG+ LP V G G T ++ G CV L G VK Sbjct: 307 ANGSGYTCALLDDASVKCWGDNSHGQLGLGDTRSRGDGPGEMGDALPPVDLGRGRTAKALTSGYSHTCALLDDDSVKCWGYNEFGQLGLGDTRIRGDGPGEMGDALPTVKLGAGRTARAIVAGGYSTCALLDDGSIQCWGYNEYGQLGLGDTAHRGDGPGEMEAALPRVNLGTGRTAKALSLGEFYTCALLDDATVKCWGRNFHGQLGLGDAEDRGLSPSQMGDALPPVNLGTGRTATALTTGVH-TCVTLDDGDVK 562
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848L585_9DELT (Uncharacterized protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848L585_9DELT) HSP 1 Score: 221 bits (563), Expect = 6.610e-66 Identity = 123/258 (47.67%), Postives = 150/258 (58.14%), Query Frame = 1 Query: 16 GSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTE---DLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771 GS HTC +LD A+KC+G N GQLG GD +RG TP +G + +V LGTG T V HTCA+L ++KC+G ND GQLGLG NRGDEP E+GDALPAV+LG GRTAV++ A TC +LDT V CWG G LG + E D G LG + V LG G A +L AG CA+ G +KCWG+ YG GLGD D RGDE GE+G+ LP V G ++ G C +L VK Sbjct: 162 GSQHTCALLDTGAVKCWGGNPSGQLGLGDMRARGGTPGDLGEHLPSVSLGTGRTAVLLAAGHEHTCAVLDTGAVKCWGANDYGQLGLGALGNRGDEPGELGDALPAVDLGKGRTAVALAAGNRHTCAVLDTGAVKCWGDHRSGQLGAATVEGTRDRGRRPGELGEHMPAVALGKGRTAVALAAGTWHTCALLDRGTVKCWGQNGYGQLGLGDKDTRGDEPGELGDALPEVDLGRKRTAVALAAGAWHTCALLDNATVK 419 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7776.1.1 >prot_C-tenellus_contig7776.1.1 ID=prot_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=257bp EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGback to top mRNA from alignment at C-tenellus_contig7776:394..3165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7776.1.1 ID=mRNA_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2772bp|location=Sequence derived from alignment at C-tenellus_contig7776:394..3165- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7776:394..3165- >mRNA_C-tenellus_contig7776.1.1 ID=mRNA_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=771bp|location=Sequence derived from alignment at C-tenellus_contig7776:394..3165- (Choristocarpus tenellus KU2346)back to top |