mRNA_C-tenellus_contig7776.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7776.1.1
Unique NamemRNA_C-tenellus_contig7776.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: D8LGR4_ECTSI (Domain repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR4_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.540e-85
Identity = 144/259 (55.60%), Postives = 172/259 (66.41%), Query Frame = 1
Query:    1 EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVG--YEAFSLGAGPCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            E  A G+ H CV+LD+  +KCFG N+YGQLG GDT  RG +  +MG+++ AVDLGTG TVV       HTCA+L+D SLKCFG+N+ GQLGL DT++RGDE  EMGD LPAV+LG  RTAV+V A GD TCV+LD   V CWG  EYG LG G   D  T  N  G     VDLGV       ++G GPCAVF  G +KCWG+G YG +G G  D  GDE GEMGE+LP V  G G L   ISGGRD+ C +L  GG+K
Sbjct:   26 EALAVGTDHACVLLDDATVKCFGQNNYGQLGLGDTDDRGQSAGTMGDSLTAVDLGTGATVVAMSAGSDHTCAVLADGSLKCFGRNNMGQLGLDDTDDRGDEAFEMGDDLPAVSLGTNRTAVAVSAQGDRTCVLLDNGNVRCWGDAEYGALGGG---DETTTGNGDGTIADSVDLGVNGTNTVGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPTVPLGEGVLVESISGGRDYQCAVLQDGGLK 281          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 238 bits (607), Expect = 1.650e-72
Identity = 125/257 (48.64%), Postives = 150/257 (58.37%), Query Frame = 1
Query:   10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            + G  HTCV+LDN  +KC+GAN  GQLG GDT  RG     MGN + AV LGTG T         HTCA+L + S+KC+G N+ GQLGLGDT++RGD P EMGD LPA+ LG GRTA ++   G  TC +LD   V CWG   YG LGLG T D G     +G +L  + LG G  A ++  G    CA+   G IKCWG   YG  GLGD   RGD  GEMG+ LP +  G G     IS G    C +L  G VK
Sbjct:   48 SVGQLHTCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVK 304          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848LCV5_9DELT (Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LCV5_9DELT)

HSP 1 Score: 241 bits (615), Expect = 2.120e-70
Identity = 128/258 (49.61%), Postives = 160/258 (62.02%), Query Frame = 1
Query:    7 FATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            FA G  HTC +LDND LKC+G N +GQLG GD  +RG  P ++G+ +  VDLGTG T         HTCAIL D S+KC+G N  GQLGLGDT +RGD+P EMGDALP V+LG GRTA ++ A G++ C ILD   V CWG    G LGLG TE  G     +G +L +V+LG G  A +L AG    CA+     +KCWG    G+ GLGD+ +RGD  GEMG+ LP V  G G + T ++ G    C  L  GG+K
Sbjct:  590 FAAGGAHTCAILDNDTLKCWGLNAWGQLGLGDHENRGDRPGNIGDWLSPVDLGTGRTARGLAAGGAHTCAILDDGSVKCWGDNQYGQLGLGDTRSRGDDPGEMGDALPPVDLGTGRTAKTLAAGGNYVCAILDDGTVKCWGDNRSGTLGLGDTEARGDDPGEMGDALPLVELGTGRIAMALAAGVSHVCALLDDASVKCWGDNRSGSLGLGDIANRGDAPGEMGDALPPVSLGTGRIATSLTAGTH-TCASLDDGGIK 846          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT)

HSP 1 Score: 231 bits (588), Expect = 9.830e-68
Identity = 120/251 (47.81%), Postives = 154/251 (61.35%), Query Frame = 1
Query:   10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753
            A G  HTC VL++  LKC+G ND GQLG G   + G +P  MG+ + AV LGT  T V       HTCA+L+D S+KC+G ND GQLGLGDT +RG +  +MGD+LPAV LG G++A++V A+G  TCV+L+   V CWG   YG LGLGS    GT  + +G +L  V+LG G  A  + AG    CAV + G +KCWG   YG  GLGD  +RG  +  MG+NLP V  G G   T +S G    C +L
Sbjct:  330 AAGDNHTCAVLNDGTLKCWGVNDSGQLGLGGMTAVGTSPSHMGDNLPAVALGTAKTAVAVSAAGEHTCAVLNDGSVKCWGNNDSGQLGLGDTLSRGGDTAQMGDSLPAVALGTGQSAIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSPASRGTSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRGTGSTSMGDNLPVVNLGTGKTATLVSAGGRHTCAVL 580          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A150G0E4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0E4_GONPE)

HSP 1 Score: 220 bits (560), Expect = 1.900e-67
Identity = 121/252 (48.02%), Postives = 147/252 (58.33%), Query Frame = 1
Query:   10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDF-TCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753
            A G+ HTC +LD   +KC+G    GQLG GDT +RG  P  MG+ +  VDLGTG T V       HTCA+L +   KC+G N+  QLG GDTNNRGD P EMGD+LP V+LG GRTAV+ MA G+  TC +LD  +  CWG    G LG G T   G     +G SL  VDLG G  A  + AG    CAV      KCWG   +G  G GD++ RGD  GEMG+NLP+V  G G     ++ G   NC IL
Sbjct:   35 AAGAYHTCAILDTARVKCWGRAANGQLGYGDTNNRGDNPGEMGDNLPFVDLGTGRTAVVLAGGHYHTCAVLDNGRAKCWGWNNAAQLGYGDTNNRGDNPGEMGDSLPFVDLGTGRTAVA-MAGGELHTCAVLDNGRAKCWGVSSLGQLGYGDTSIRGDNPGEMGDSLPYVDLGTGRTAVVITAGTYHSCAVLDNARAKCWGPYYFGQLGYGDLNTRGDGPGEMGDNLPYVDLGTGRTAVALATGAYHNCAIL 285          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO)

HSP 1 Score: 234 bits (598), Expect = 6.310e-67
Identity = 127/257 (49.42%), Postives = 152/257 (59.14%), Query Frame = 1
Query:   10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            + GS HTC +LDN ++KC+G NDYG LG GDT  RG     MG+ + AV LGTG T         HTCA+L + S+KC+G N  GQLGLGDT+ RGD P EMGD LPAV LG GRTA ++ A    TC +LD   V CWG  +YG LGLG T   G     +G +L  V LG G  A ++ AG    CA+   G +KCWG   YG  GLGD   RGD  GEMG+ LP V  G G   T IS G  + C +L  G VK
Sbjct: 1573 SVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNELGEMGDRLPAVALGTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVK 1829          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A4U1HXX6_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HXX6_9DELT)

HSP 1 Score: 223 bits (567), Expect = 1.080e-66
Identity = 122/262 (46.56%), Postives = 156/262 (59.54%), Query Frame = 1
Query:    1 EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMAS--GDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            +  A G  H+C +L +  LKC+G N  GQLG GD   RG  P  MG+ + AVDLGTG + V        +CA+L+D ++KC+G + +GQLG GDT  RG  P +MGDALPA+NLG G  AV+V AS  G F C +L    V CWG    G LGLG T   G     +G +L  VDLG G +A ++  G    CA+     +KCWG+G+YG  GLGD + RGDE GEMG+ LP V  G GG+   I+ G   NCV+L  G VK
Sbjct:   40 KALAVGGFHSCALLSDGRLKCWGHNYGGQLGVGDENIRGDEPGEMGDQLPAVDLGTGKSPVAISLGQYFSCALLNDGTVKCWGDSYRGQLGQGDTQRRGGAPNQMGDALPAINLGTGAIAVAVSASTSGGFACALLQGGAVKCWGENFKGQLGLGDTNHRGDEPGEMGDALPAVDLGTGKKAIAIVTGYSNACALLDDFSVKCWGEGLYGQLGLGDKNGRGDEPGEMGDALPAVDLGTGGIVHAIAAGAAHNCVLLSTGRVK 301          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT)

HSP 1 Score: 225 bits (573), Expect = 3.510e-66
Identity = 117/249 (46.99%), Postives = 151/249 (60.64%), Query Frame = 1
Query:   16 GSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAG---PCAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVIL 753
            G+ HTC +L+N ++KC+G ND GQLG GDT SRG     MG  + +VDLGTG T          TCAIL +SS+KC+GKND+GQLG G+TN+ GD   EMGD L  ++LG GRTA ++   G   C ILD   + CWG    G LG+GST+D G  AN +G +L  +DLG G  A ++ AG    CA+     +KCWGK   G  GLGD ++RGD A EMG++L  V  G G     I+ G    C +L
Sbjct:  192 GAYHTCTILENSSVKCWGKNDSGQLGLGDTNSRGDGANEMGANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGNTNSLGDAGSEMGDNLTPIDLGTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALL 440          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848LHZ3_9DELT (Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LHZ3_9DELT)

HSP 1 Score: 224 bits (571), Expect = 5.780e-66
Identity = 124/257 (48.25%), Postives = 155/257 (60.31%), Query Frame = 1
Query:   10 ATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            A GSG+TC +LD+ ++KC+G N +GQLG GDT SRG  P  MG+A+  VDLG G T         HTCA+L D S+KC+G N+ GQLGLGDT  RGD P EMGDALP V LG GRTA +++A G  TC +LD   + CWG  EYG LGLG T   G     +  +L  V+LG G  A +L  G    CA+     +KCWG+  +G  GLGD +DRG    +MG+ LP V  G G   T ++ G    CV L  G VK
Sbjct:  307 ANGSGYTCALLDDASVKCWGDNSHGQLGLGDTRSRGDGPGEMGDALPPVDLGRGRTAKALTSGYSHTCALLDDDSVKCWGYNEFGQLGLGDTRIRGDGPGEMGDALPTVKLGAGRTARAIVAGGYSTCALLDDGSIQCWGYNEYGQLGLGDTAHRGDGPGEMEAALPRVNLGTGRTAKALSLGEFYTCALLDDATVKCWGRNFHGQLGLGDAEDRGLSPSQMGDALPPVNLGTGRTATALTTGVH-TCVTLDDGDVK 562          
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Match: A0A848L585_9DELT (Uncharacterized protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848L585_9DELT)

HSP 1 Score: 221 bits (563), Expect = 6.610e-66
Identity = 123/258 (47.67%), Postives = 150/258 (58.14%), Query Frame = 1
Query:   16 GSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIGAVDLGTGLTVVXXXXXXGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGDEPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNLGLGSTE---DLGTFANPLGPSLSVVDLGVGYEAFSLGAGP---CAVFSTGGIKCWGKGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVILMLGGVK 771
            GS HTC +LD  A+KC+G N  GQLG GD  +RG TP  +G  + +V LGTG T V       HTCA+L   ++KC+G ND GQLGLG   NRGDEP E+GDALPAV+LG GRTAV++ A    TC +LDT  V CWG    G LG  + E   D G     LG  +  V LG G  A +L AG    CA+   G +KCWG+  YG  GLGD D RGDE GE+G+ LP V  G       ++ G    C +L    VK
Sbjct:  162 GSQHTCALLDTGAVKCWGGNPSGQLGLGDMRARGGTPGDLGEHLPSVSLGTGRTAVLLAAGHEHTCAVLDTGAVKCWGANDYGQLGLGALGNRGDEPGELGDALPAVDLGKGRTAVALAAGNRHTCAVLDTGAVKCWGDHRSGQLGAATVEGTRDRGRRPGELGEHMPAVALGKGRTAVALAAGTWHTCALLDRGTVKCWGQNGYGQLGLGDKDTRGDEPGELGDALPEVDLGRKRTAVALAAGAWHTCALLDNATVK 419          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7776.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGR4_ECTSI1.540e-8555.60Domain repeat protein n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835T669_9CHLO1.650e-7248.64Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A848LCV5_9DELT2.120e-7049.61Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fall... [more]
A0A017SY21_9DELT9.830e-6847.81Uncharacterized protein n=2 Tax=Chondromyces apicu... [more]
A0A150G0E4_GONPE1.900e-6748.02Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A835T094_9CHLO6.310e-6749.42Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A4U1HXX6_9DELT1.080e-6646.56Uncharacterized protein n=2 Tax=Polyangium aurulen... [more]
A0A520PN85_9PROT3.510e-6646.99Big_5 domain-containing protein (Fragment) n=1 Tax... [more]
A0A848LHZ3_9DELT5.780e-6648.25Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fall... [more]
A0A848L585_9DELT6.610e-6647.67Uncharacterized protein n=1 Tax=Pyxidicoccus falla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7776contigC-tenellus_contig7776:394..3165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LGR4
Preferred nameRCCD1
PFAMsRCC1,RCC1_2
Model size771
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
Exons5
Evalue2.53e-86
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Descriptionguanyl-nucleotide exchange factor activity
Cds size771
COG categoryDZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790057.56284-CDS-C-tenellus_contig7776:393..5731680790057.56284-CDS-C-tenellus_contig7776:393..573Choristocarpus tenellus KU2346CDSC-tenellus_contig7776 394..573 -
1680790057.5739224-CDS-C-tenellus_contig7776:1127..12981680790057.5739224-CDS-C-tenellus_contig7776:1127..1298Choristocarpus tenellus KU2346CDSC-tenellus_contig7776 1128..1298 -
1680790057.582872-CDS-C-tenellus_contig7776:1963..21431680790057.582872-CDS-C-tenellus_contig7776:1963..2143Choristocarpus tenellus KU2346CDSC-tenellus_contig7776 1964..2143 -
1680790057.5943432-CDS-C-tenellus_contig7776:2753..29331680790057.5943432-CDS-C-tenellus_contig7776:2753..2933Choristocarpus tenellus KU2346CDSC-tenellus_contig7776 2754..2933 -
1680790057.6052992-CDS-C-tenellus_contig7776:3105..31651680790057.6052992-CDS-C-tenellus_contig7776:3105..3165Choristocarpus tenellus KU2346CDSC-tenellus_contig7776 3106..3165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7776.1.1prot_C-tenellus_contig7776.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7776 394..3165 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7776.1.1

>prot_C-tenellus_contig7776.1.1 ID=prot_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=257bp
EGFATGSGHTCVVLDNDALKCFGANDYGQLGQGDTVSRGATPISMGNAIG
AVDLGTGLTVVALSAGSGHTCAILSDSSLKCFGKNDKGQLGLGDTNNRGD
EPLEMGDALPAVNLGVGRTAVSVMASGDFTCVILDTLKVTCWGAGEYGNL
GLGSTEDLGTFANPLGPSLSVVDLGVGYEAFSLGAGPCAVFSTGGIKCWG
KGVYGAHGLGDMDDRGDEAGEMGENLPFVVTGPGGLTTFISGGRDFNCVI
LMLGGVK
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mRNA from alignment at C-tenellus_contig7776:394..3165-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7776.1.1 ID=mRNA_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2772bp|location=Sequence derived from alignment at C-tenellus_contig7776:394..3165- (Choristocarpus tenellus KU2346)
GAAGGTTTTGCTACAGGGTCGGGACATACCTGCGTTGTTCTGGATAACGA TGCTCTTAAGGTGACCTGACCAGGAAAGGAATTTTGGGGATGATGGGTGA ATGCTGAATAGTGGAATGCCCTTAATTCTTCCATTTACATCTTTACCTCA CAGTGTGACTTTCGGGCATTCCCAACATCTCAGCGTACTAACCCCTCCAA TCCCCTAATGGCGTTCCCGTGACGGTCGTCAGTGTTTCGGAGCAAATGAC TACGGTCAACTAGGACAGGGTGATACAGTCAGCCGTGGCGCAACGCCCAT ATCCATGGGGAATGCTATTGGAGCTGTTGACTTGGGCACTGGGCTGACTG TTGTTGCGCTTTCCGCTGGTAGTGGTCACACTTGTGCCATCTTGTCTGAT TCCAGCCTCAAGGTGACAGAGACGCACGGGCACGATAAATAGTGTATCCG AACAGGGTATGACGGTACACATACTACAAATGAATATATATAGTCATGGT CAATTGATGGAAGTAGTCCAGGCACGATCCCCACAGCTAGCTCCGTTGAA TAACCTTTTCGCAAAAATATAGCATCTAGATACGCATTCGAGTGAGGTTG AACGATGTATCAACGGTTGTCGCTTGTGGCGAAGACATGGAATTTCTTCA TGCCTTCATACCCCCCACCAGTCACGTATGATGCCGTCTCAATGTGCCCG ACAAGAAAACACTCATATCGATGAAGCAAACCCTCAAACATTTCTTGCTC TCGACTCCAAAGTGGAAAGTCATATTTGTCTTGCAAGCGGTCCGCTTACC ACCACCCACGTTTCCGAAACGATAAGTAATGTGAAGGAAACATACATTGT ACATAGTTGACCCCAGACGTAGCCTTTTGAACAGTGTTGCCGAGTACTAT CTCTACCGCCACATGAAATCTCGTTGTTGCTAATACAACCAAATGCAATC CAGAAGCGATTTGTCAGATATTGGAGGAAGCTGAACTTCTCTGATATTAC AGCTTTTCTTGCTTGTTTACAGTGCTTTGGAAAGAACGACAAGGGGCAGC TGGGGCTGGGCGACACTAACAACCGAGGAGACGAGCCACTGGAAATGGGC GATGCACTCCCAGCCGTCAACCTTGGCGTCGGTCGGACTGCCGTGAGCGT GATGGCCAGTGGTGACTTCACCTGTGTCATCTTGGATACTCTCAAAGTCA CTGTGAGCTCTGCGGTAGTCCTTGGGTTGAGGGACTTGAGAATGTCACTA GAACTTGAGCTTTTGAATGGCTCGTTCAATTTTGTCGAATTGGTCTAAAT GATTTCAGTAATGATCACAAGGGGGAATGTTGACAGGAGGAACCTGTGCA ACCAGTTGAGTTGCGAAATGCAGTTCTTACGTGTCTTGTGGGATTTTGTG GAATGGTTTGGTCAATGAGGGCCTTTTGCTTTCTTTGTTGCTACTATTAC TCTTATTCTTTAGTGTCTACAATGTCTACATCAGTAGTATTTTGTGGTTC AATTTGATATGGTACAACGCCGAGTAGATTTAGTGATTGATCTGTATCAT CTACTGTTCTTGCTGTTGTTGGGCTCAAGCTGATGCATTTTCCATCCCAA CGCTTGTCAAGGGTCCAACCATGCAACACAGACTTGAATGTCATATGCAA GCATTTGCACCCTGTCGAACTTGTCGAAGAGTATACACTCTCTCCCTTCA TCACAGATCCATTCCCGGTCCTATTTTGCGTCACAAGCACTGGTTCTGCT ATTAAGCCTTTTCCCATCTCCCAGCCAGCCTGGCATCTTTTGTCATCCTA CCTGACCGACCTCACATTGACTACACCCGTGGAATATACTTTTTTGGTGG TCTAATTATTTGCACAGTGCTGGGGGGCTGGGGAATACGGGAATTTGGGT CTGGGCAGCACTGAAGATCTCGGGACCTTTGCCAATCCTTTGGGTCCATC ACTATCTGTTGTGGACCTGGGTGTGGGCTACGAAGCCTTTTCTCTAGGAG CGGGGCCCTGTGCTGTCTTTTCAACGGGCGGAATCAAGGTGATGACCTGA GATAAGGAAAATTGGCGTTGGTACGGGCACTGATGCTGCATAGATGGAAG TGTGATTGCTGTCTTTCAGGAGTACTTAAGATATTTTGTTGAAATGAAGG CAATAGGACAACACATGTGTATCGATGGACGCCATATAGTTCCATTGGTT GCAAAATATGGTTACGGGATATGATCGCAACAACCATTTCACGGTGGGGG TGAAACTCCGATTGATGACCCAAAAGGGCCGGAGGATGGAATTTGGGGCT GTTTCAAGTTTTTGAAAGGTTGCATTTCTTGTACGAGTGTTGAACCCAGT TCGTCCCCACCTCTATCGCTGCTGCTGCTGCTGCTGCTGCTGTTACTGTC TGAGCATGAATGTACCGCTGAGACAATCGACTTTTTCGGTTTCATTTCTC TAAACCTGAACTTCCGTTACGTGTCTAAACCGACAAAGTTTCTCCCAGGA GTCTCGAGTGTTGCTACTAATAACATCTACTGGCGTGATCCCCTCCTCCC TTCCCCTGGTACCAATTGCACCCTCTTTCCGTCCACACACAGTGCTGGGG CAAGGGGGTGTATGGAGCCCATGGGCTTGGCGACATGGATGACAGGGGTG ACGAAGCGGGGGAGATGGGTGAAAACCTTCCATTTGTTGTGACCGGGCCT GGCGGCTTGACCACTTTCATCTCAGGAGGGCGGGACTTCAACTGCGTTAT TCTGATGTTGGGGGGAGTCAAG
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Coding sequence (CDS) from alignment at C-tenellus_contig7776:394..3165-

>mRNA_C-tenellus_contig7776.1.1 ID=mRNA_C-tenellus_contig7776.1.1|Name=mRNA_C-tenellus_contig7776.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=771bp|location=Sequence derived from alignment at C-tenellus_contig7776:394..3165- (Choristocarpus tenellus KU2346)
GAAGGTTTTGCTACAGGGTCGGGACATACCTGCGTTGTTCTGGATAACGA
TGCTCTTAAGTGTTTCGGAGCAAATGACTACGGTCAACTAGGACAGGGTG
ATACAGTCAGCCGTGGCGCAACGCCCATATCCATGGGGAATGCTATTGGA
GCTGTTGACTTGGGCACTGGGCTGACTGTTGTTGCGCTTTCCGCTGGTAG
TGGTCACACTTGTGCCATCTTGTCTGATTCCAGCCTCAAGTGCTTTGGAA
AGAACGACAAGGGGCAGCTGGGGCTGGGCGACACTAACAACCGAGGAGAC
GAGCCACTGGAAATGGGCGATGCACTCCCAGCCGTCAACCTTGGCGTCGG
TCGGACTGCCGTGAGCGTGATGGCCAGTGGTGACTTCACCTGTGTCATCT
TGGATACTCTCAAAGTCACTTGCTGGGGGGCTGGGGAATACGGGAATTTG
GGTCTGGGCAGCACTGAAGATCTCGGGACCTTTGCCAATCCTTTGGGTCC
ATCACTATCTGTTGTGGACCTGGGTGTGGGCTACGAAGCCTTTTCTCTAG
GAGCGGGGCCCTGTGCTGTCTTTTCAACGGGCGGAATCAAGTGCTGGGGC
AAGGGGGTGTATGGAGCCCATGGGCTTGGCGACATGGATGACAGGGGTGA
CGAAGCGGGGGAGATGGGTGAAAACCTTCCATTTGTTGTGACCGGGCCTG
GCGGCTTGACCACTTTCATCTCAGGAGGGCGGGACTTCAACTGCGTTATT
CTGATGTTGGGGGGAGTCAAG
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