mRNA_C-tenellus_contig7752.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A835Z6W0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W0_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.490e-35 Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 13 ELPLLRSLAACNRVILGAILVLLVPLF-LGAVSNSSPVTMPITSYGN-TFSWNFGWGRPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGRCALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYRHLHGGGCKRVREMRQEL 540 E+P LR L R +L A + LL PL L A ++ P+ PIT+Y + + SWN+GWGRP T + +GMF +YHPGVR +C+ GL L LDT+++ DL + CV +GRC + KGYT L+ R++A+ AL + YL+ G ++ RY YR LH G R +R+EL Sbjct: 38 EIPQLRFLIRALRGLLLAYIALLAPLLTLAARWDAMPIPRPITAYRDGSGSWNYGWGRPMTGMASAFMGMFMDYHPGVRCICMGGLSVGLVLDTISAIDLDTQRYCVAEGRCPMAKGYTAQLLQWLYFREMAACAIGTCALAHILYLSAVTGVFRTRYTYRQLHTGQHNRAAALRKEL 215
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A7S2BL85_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL85_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.340e-17 Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 1 KESQELPLLRSLAACNRVILGAILVLLVPLFLGAVSNSSPVTMPITSYGN------TFSWNFGWGRPCTHLIF-ISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGRCALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIG 462 + S EL +LR + ++ I+VL PL A S P+ T++ + SWNFG GRP + ++F ++G HP +RW + L + LDT+A H + C+ G+C GY + G+ L R++A+++ +VWALL++ ++ + G Sbjct: 50 RPSDELSVLRRTISTLARLMFWIVVLATPLAFNAFSLGHPLVRDATTFATKGLGVGSMSWNFGVGRPISVVVFGAALGATASVHPAMRWALVLLLVAQVCLDTLACGQFHLRLECIESGKCLYVPGYDKYGMFLLWARELAALVLDVWALLILGHIFVMHG 210
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A812PQF8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PQF8_9DINO) HSP 1 Score: 64.7 bits (156), Expect = 2.090e-9 Identity = 32/108 (29.63%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 166 FGWGRPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGRCALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYR 489 +G RP HL+ I +G F H RW+ + C + DT + + ++ C +G C G++ L + +R ++ FE+W +L+ AYL IG RY R Sbjct: 84 YGGARPTAHLLVIFMGFFVNSHHCFRWLTIMAQCVFIIFDTFSVAHIDLQLQCRSNGTCESSDGWSVMDLTVIQVRHYVALWFEIWTVLITAYLMFVIGICWPRYPVR 191
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A1V9ZIU6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIU6_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.600e-6 Identity = 35/107 (32.71%), Postives = 51/107 (47.66%), Query Frame = 1 Query: 178 RPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGR-CALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYRHL 495 R L+ +G HP +R + G+ + DT++ TC G C+ G T G L+ +RD+ SI+ E+WA LL+ YL L+IG RY R L Sbjct: 94 RALASLVLTLLGFGTNTHPSIRHLFGLGMLGLVGFDTVSEVHYVSATTCGSKGSLCSTLPGITTGQLQQLMVRDLISIVLELWAFLLVCYLCLSIGCCFSRYTQRQL 200
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A067CFV1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CFV1_SAPPC) HSP 1 Score: 55.1 bits (131), Expect = 9.160e-6 Identity = 33/106 (31.13%), Postives = 48/106 (45.28%), Query Frame = 1 Query: 178 RPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGRCALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYRHL 495 RP + + G +HP VR + L + + DT++ C G+ P T L +RD+ SI+ E+WA L +AYL L IG RY+ R L Sbjct: 94 RPLLGALCTAFGFSTNFHPSVRHLFLVAMLSLVTCDTISEVHYLSIAECAAKGQLCSPIPVTSEKLLRLVLRDLVSIVLELWAALQVAYLCLAIGCCSSRYSARQL 199
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A1V9Y739_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y739_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 9.640e-6 Identity = 34/107 (31.78%), Postives = 51/107 (47.66%), Query Frame = 1 Query: 178 RPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGRCALP-KGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYRHL 495 RP +I + G +HP R + A + +A DT++ + C G P G T L+ +RD +I+ E+WALL +AYL L++G RY R L Sbjct: 99 RPLAGMIMTTFGFATNFHPSFRHLFGAAMVGLIAFDTVSEVHYLSILMCAAKGIVCSPIAGVTTAELQNYMLRDFIAIVLELWALLQVAYLCLSVGCCFSRYTQRQL 205
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Match: A0A485KQI8_9STRA (Aste57867_10249 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQI8_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.840e-5 Identity = 34/124 (27.42%), Postives = 60/124 (48.39%), Query Frame = 1 Query: 127 MPITSYGNTFSWNFGWGRPCTHLIFISVGMFFEYHPGVRWVCLAGLCQALALDTMASYDLHREITCVWDGR-CALPKGYTRGGLRLAGMRDVASILFEVWALLLMAYLNLTIGQWKVRYAYRHL 495 M + G + S+ GRP ++ ++ G H R + ALDT++ ++C G C+ T L+L RD+ +I FE+W++L+ A+L+++IG RY++R L Sbjct: 84 MSMPDSGKSSSFFDSLGRPLGAMLGLAFGFSTNLHASFRIFVVXXXXXXXALDTVSEVRYVSILSCGKKGAVCSASAAITPTRLKLLAARDLVAIAFELWSMLVTAFLSVSIGICVSRYSHRQL 207 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7752.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7752.2.1 >prot_C-tenellus_contig7752.2.1 ID=prot_C-tenellus_contig7752.2.1|Name=mRNA_C-tenellus_contig7752.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=186bp KESQELPLLRSLAACNRVILGAILVLLVPLFLGAVSNSSPVTMPITSYGNback to top mRNA from alignment at C-tenellus_contig7752:1884..2441+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7752.2.1 ID=mRNA_C-tenellus_contig7752.2.1|Name=mRNA_C-tenellus_contig7752.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=558bp|location=Sequence derived from alignment at C-tenellus_contig7752:1884..2441+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7752:1884..2441+ >mRNA_C-tenellus_contig7752.2.1 ID=mRNA_C-tenellus_contig7752.2.1|Name=mRNA_C-tenellus_contig7752.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=558bp|location=Sequence derived from alignment at C-tenellus_contig7752:1884..2441+ (Choristocarpus tenellus KU2346)back to top |