mRNA_C-tenellus_contig7752.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A6H5L8T9_9PHAE (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8T9_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.160e-39 Identity = 89/199 (44.72%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 292 RMSMCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSNFRL----DEDSRDFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLPSLFDVLALVAAISMAILFIQKSTWPRLSEHAPEIRTPIVGAVAVFQFLCCVFLL 876 ++SMCGLLS+++Y+PYFDVDTS+V ++L +A P+ K S L E G +DLYGP WV TLIF++S N R D +F+ + SV +Y + GGLWAFF+ G+PLS +EALS+ GYSLT F+ A LC+L F L AA +A +F+ +S+WPRL EH PE ++ ++ AV + FLL Sbjct: 94 KISMCGLLSLQYYQPYFDVDTSEVKTKLLQAIWPMRKTASFLGE--GDSSKVDLYGPVWVPATLIFLLSVAVNARRAMTDDASLGEFDDVSTSAYSVLAYLAIGTGGLWAFFRTHGVPLSFAEALSVYGYSLTPFLAAAPLCLLSWPFRSCGLAAASLVAAIFVLRSSWPRLQEHMPE-KSMVLLLTAVATYHVLWFLL 289
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A662XNT8_9STRA (Protein YIPF n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNT8_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.930e-23 Identity = 71/216 (32.87%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 226 SKLLSDVEMGSS-QPSATKTNELRMSMCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSNFR--LD------EDSRDFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLP-SLFDVLALVAAISMAILFIQKSTWPRLSEH-APEIRTPIVGAV 840 S + D MG +P + M MCG L++ +Y+PYFDVDT+ V RL +A +P K PS E D YGPFW++TTLIF +++ SN LD E S DF+ L ++ V + + +W K +P+++ + L GYS+ F+PA LC +P D + L+ A++ ++ F+ + W +SEH E P++ + Sbjct: 2 SPKVRDTLMGKKGEPYSEDNKGNAMGMCGCLTLAYYKPYFDVDTTDVQLRLMRALVPFKKEPSFAELAMASP---DAYGPFWLSTTLIFCLASCSNVASFLDYTGDTSEWSYDFSRLASAYTLVEIFLLGLPVLIWLVGKYFQVPMTLLFLVCLYGYSMMMFIPAAILCTIPIDAMDWVVLLLAMTWSLFFLLSNLWSVISEHLTKEKMLPVLAVI 214
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: W7TJY7_9STRA (Protein YIPF n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJY7_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.130e-22 Identity = 72/225 (32.00%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 220 ATSKLLSDVEMGSSQPSATKTNELRM----SMCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSN------FRLDEDSR---DFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLPS-LFDVLALVAAISMAILFIQKSTWPRLSEHAPEIRTPIVGAVAVFQ 852 A++ LL D E G Q + T +C LSI +Y+PYFDVDT V+ R+ A P K + ++ D YGPFWVAT+LIFV++ +SN F E S DF +V +++ + + +WA + LPL + + +++ GYSL +FVP L +P+ F L+ +AA + +++F+ K+ P + E AP+ P + ++ Q Sbjct: 20 ASAALLRDAETGGGQMRSDATGAGEDVPAGGLCSCLSIRYYQPYFDVDTQHVVDRIKYALFPFKKESTFIQLLGPNP---DAYGPFWVATSLIFVIAVVSNVSSYFQFVGTEGSAWTYDFAAVVTCATTIYGFAAIIPLLIWAALRYMQLPLPLIQTVAIYGYSLVAFVPCTLLNFIPAPAFPWLSEIAAAAASVVFLLKALGPVVMEKAPQHAMPFLASIGAVQ 241
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A2D4BSX3_PYTIN (Protein YIPF n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSX3_PYTIN) HSP 1 Score: 97.1 bits (240), Expect = 1.850e-19 Identity = 66/205 (32.20%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 301 MCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSN----FRLDEDSRDFNLLVQGFSSVSSYCVV---FGGGLWAFFKLKG-----LPLSVSEALSLCGYSLTSFVPAVALCVLP-SLFDVLALVAAISMAILFIQKSTWPRLSEH-APEIRTPIVGAVAVFQFLCCVFL 873 MC L++ +Y+P+FDVDTS + R+ +A LP PS E D YGPFW++ TLIF +++ SN + D R++ V FS V++ C V F GL L G +P+S+S + L GYS F+PA +C++P D +A++ A++ ++ F+ + W +SEH + E P++ +A + + + Sbjct: 53 MCSCLTLAYYQPFFDVDTSDIQQRMVRAILPFKSTPSFFEIVAPAP---DAYGPFWLSVTLIFCLASCSNVASYWDFVGDRREW---VYDFSRVATACTVVEIFLVGLPVLLWLVGKYGANVPMSLSFLMCLYGYSTAVFIPATFICMVPLEGLDWVAVLVAMAWSLYFLLTNVWAMISEHLSKEKMLPLLAVIAASHLIWAILV 251
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A7S2W6P0_9STRA (Protein YIPF n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6P0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.630e-18 Identity = 69/196 (35.20%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 301 MCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSNFRLDEDSR---DFNLLVQGFSSVSSYCVVFGGGLWAFFK-LKGLPLSVSEALSLCGYSLTSFVPAVALCVLPSLFDVLALVAAISMAILFIQKSTWPRLSEHAPEIRTPIVGAVAVFQFLCCVFLL 876 MCG S+ +YRPYFDVDT +V RL P+ L + D YGPFW ATTLIFV++ +N + + DF L+ S V Y +WA FK + G+ +++ L L GYSL F+P L ++P L AL+AA+ + LFI +S P S + + +AVF +F+L Sbjct: 50 MCGCFSVAYYRPYFDVDTDRVKERLLSTFTFYKPEPTFLTLIKDSP---DAYGPFWTATTLIFVIAVTANLTSNAKTGYNYDFELVTSCMSLVYGYLAFLPVTMWAAFKYILGVQVALMNLLCLFGYSLFLFIPFALLALVP-LLSWPALMAAMVSSTLFILRSVIPLASSS----KEKAMSVLAVFITCQAIFVL 237
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A024FZC4_9STRA (Protein YIPF n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZC4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.720e-18 Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 301 MCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSN------FRLDED--SRDFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLP 714 +CG ++ +Y+PYFDVDTS V R+++A LP+ K P E D YGPFW++TTLIF++++ SN F+ D+D + DF+ L ++ V S+ + W + G LS++ + L GYS T ++PA LC+LP Sbjct: 57 ICGCFTLAYYQPYFDVDTSDVQQRISRAILPLKKNPHFTEIIGTSP---DAYGPFWLSTTLIFMLASCSNGAGYLDFQGDKDEWTYDFSRLATAYTLVVSFVLGVPVLTWGAVRYFGATLSLTYLVCLYGYSTTLYIPASFLCMLP 199
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: F0Y9I0_AURAN (Protein YIPF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I0_AURAN) HSP 1 Score: 90.9 bits (224), Expect = 8.880e-18 Identity = 66/191 (34.55%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 301 MCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSNFRL-----DEDSRDFNLLVQGFSSVSSYC--VVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLPSLFDVLALVAAISMAILFIQKSTWPRLSEHAPEIRTPIVGAVAVFQ 852 MC LSI +YRP+FDVDT +VL R+ +A L L + D YGP+W+ATTLIF++S S+F+ D+ DF + +V +Y F L + LK +P+++ L + GYSL ++PA CVLP + A++AA F K+ P + +H E GAV V Sbjct: 1 MCSCLSIAYYRPFFDVDTDEVLGRV-RAALLFCHSEPFLRVLRNKP---DAYGPWWIATTLIFLISVTSHFKALLSLGDDYEYDFAAVTFSAMAVYTYLGLAAFTSWLCLNYWLK-VPMALLNCLCIVGYSLVPYLPASLACVLPYMAWP-AVLAAAGAQTAFSLKAALPAIEQHPKEKAAVYAGAVVVLN 185
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: F0W111_9STRA (Protein YIPF n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W111_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.080e-16 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 268 SATKTNELRMSMCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSN------FRLD--EDSRDFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLP 714 SA N++ CG ++ FY+PYFDVDT V R+ +A LP+ K P E C D YGPFW++TTLIF++++ SN ++ D E + DF+ L ++ V+ + + W + G+ LS++ + L GYS T ++PA LC+LP Sbjct: 50 SAQSVNKI----CGCFTLAFYQPYFDVDTRDVQQRMLRAILPLKKNPHFTEII--GTCP-DAYGPFWLSTTLIFMLASCSNGAGYLDYQGDKGEWTYDFSRLATAYTLVAGFVLGVPILTWGAVRYFGVALSLTYLICLYGYSTTLYIPASILCMLP 199
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A197JVW3_9FUNG (Protein YIP n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JVW3_9FUNG) HSP 1 Score: 88.2 bits (217), Expect = 4.090e-16 Identity = 62/201 (30.85%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 316 SIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVLDLYGPFWVATTLIFVMSAMSNFRLDEDSR--------DFNLLVQGFSSVSSYCVVFGGGLWAFFKLKGLPLSVSEALSLCGYSLTSFVPAVALCVLPSLFDVLA---LVAAISMAILFIQKSTWPRLSEHAPEIRTPIVGAVAVFQFLCCVFLLGRF 885 S+E+Y +FDVDT+QV+ R + VI + L+ +G DLYGPFW+ATT++FV+ +S+ ++ DF L F ++ SY + +W K G + + L+L GY LT ++P LCVLP FD+L ++ + + LF+ ++ +P LS + I+ V L + L +F Sbjct: 73 SVEYYAKFFDVDTAQVMERCFAS---VIPKENFLDVMQGSP---DLYGPFWIATTVVFVLFVISSIVESINAYTAGTPYKYDFTALTFAFGTIYSYAFLVPTVIWGATKYFGCQPDLLDMLALYGYGLTIWIPVAVLCVLP--FDLLRWGFVILGAAASGLFLVRNMYPVLSRAEAQTSKSILILVVALHGLLALMLKYKF 265
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Match: A0A7S2CU41_9STRA (Protein YIPF n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU41_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.250e-15 Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 301 MCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIKGPSILEEEEGRECVL---DLYGPFWVATTLIFVMSAMSN---FRLDEDSRDFNLLVQGFSSVSSYCVVFGGGLWAFFK-LKGLPLSVSEALSLCGYSLTSFVPAVALCVLPSLFDVLA---LVAAISMAILFIQKSTWPRLS---EHAPEIRTPIVGAVAVFQFL 858 +C L++ +Y+PYFD+DT V RL K+ + +K +EE V D YGPFW ATTLIF++SA SN + + DF L+ S + Y VV LWA F LP+ + L GYS ++P C + + F L+ +V A + LF+ KS P +S E A + + +V A AVF + Sbjct: 56 LCSCLTVGYYQPYFDIDTVDVYRRL-KSTVTFMK-----DEETFLTSVSTKPDAYGPFWTATTLIFIISATSNISRYLAKGYNYDFELVSFCMSFIYGYLVVLATALWAAFTYFVKLPVRYMSLMCLVGYSFALYIP----CTILATFSALSWPSIVLAGVGSTLFVLKSIVPVISARKEKAVTVLSLLVAAQAVFMLI 244 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7752.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7752.1.2 >prot_C-tenellus_contig7752.1.2 ID=prot_C-tenellus_contig7752.1.2|Name=mRNA_C-tenellus_contig7752.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=216bp MGSSQPSATKTNELRMSMCGLLSIEFYRPYFDVDTSQVLSRLAKAGLPVIback to top mRNA from alignment at C-tenellus_contig7752:12..1660- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7752.1.2 ID=mRNA_C-tenellus_contig7752.1.2|Name=mRNA_C-tenellus_contig7752.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1649bp|location=Sequence derived from alignment at C-tenellus_contig7752:12..1660- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7752:12..1660- >mRNA_C-tenellus_contig7752.1.2 ID=mRNA_C-tenellus_contig7752.1.2|Name=mRNA_C-tenellus_contig7752.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=648bp|location=Sequence derived from alignment at C-tenellus_contig7752:12..1660- (Choristocarpus tenellus KU2346)back to top |