mRNA_C-tenellus_contig77.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: D7G865_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G865_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.530e-66 Identity = 160/454 (35.24%), Postives = 241/454 (53.08%), Query Frame = 1 Query: 1 LKVVSLDGRGIHSYDKQGGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRR-ISSSDRCTSSYSLSLIREFKDCPKWMTKIEFDEEAQILLVLKGGCVVIYDT---TTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVK-IAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDIHRLIAVAVIQTSGPHGLLLVEMDQGLWGMIDESVLV--GWNKDQDTADAIP------LSYKG----GSSQKYGNQENTSVRVNGRKREKG-GNCCGMGLADRTK-FFLAWAHLKSVADRFCHHTWVPRRSKVVCLADNGSLAVHSV--EKGKESKGQSWQVSLPSPNEKVMCMVLL 1299 +++VS DGR I S+ + G + VK + E +++ ++ +IP +V++ +S D+ L V+D R + L L T K LL L YN D+IISGGS+GC VWRL + Y L+L+ FK C W ++ FDE +Q+++ + G V YD TTNL + I RAH P+T LW +S+ IVTGC G +K+WAC H D + R + + K + + R + PAL+KS HS +TGLV H +N S I+SS D TLR+WD+ RL AV + GL+LV+M QGLWG++ ES+L+ G +T ++ +S G G+ + + E T +++ E G G+ + + T F +W L V +R+ HH RR +V+CLA +G L ++ E+G+ K S V L + M LL Sbjct: 1 MRIVSTDGRSIDSWLELGNGDSVKT-ARVEHNVINAIAYIPPLNVVVAASGDS-LVVFDGRTMRCLATLSTSKKVLLQLQYNLARDEIISGGSDGCFVWRLTAAPFKPYAQEVVPYELTLLHGFKGCSHWAGRMFFDERSQVIITIDGMKVQKYDAGAATTNLYI--IKRAHESPVTVVLWVGESENIVTGCMGGLLKIWACQHTDANGVKRSRRGRWRQHKRLRCARSHRKGCGRSPALVKSFEGHSGGITGLVRHCLNSSYIVSSGADGTLRVWDVDRLAAVTAVSRESDVGLVLVQMKQGLWGLMSESLLLPTGTQPATNTKTSVSSTATTCVSQAGLIPPGTDESQHSFERTEGKIS--NLEFGDGDAIALDEGNTTSSLFHSWPSLSCVVERYSHHVLSRRRRRVICLAGSGVLDTYAYDPERGEARKISSRDVDLHANGATATSMCLL 448
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: UPI001425AF50 (uncharacterized protein LOC117114300 isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AF50) HSP 1 Score: 79.0 bits (193), Expect = 7.320e-12 Identity = 68/292 (23.29%), Postives = 132/292 (45.21%), Query Frame = 1 Query: 10 VSLDGRGIHSYDKQGGQNLVKP---FSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVR---RISSSDRCTSSYSLSLIREFKDCP-KWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLW--DIHRLIAVAVIQTSG 858 + LD RGI +++K N V + + ++ + + +++V + D +L+V + E + + +++FL +N D++I+GG +G VW + R+ + + ++Y+L RE K W+ KIE D+ Q L V+ YD L V +++ AH +T + ++ +VT + +KVW+ + H + + R HS VT ++ H + S++L+SS+D ++RLW +I ++ V+ T G Sbjct: 142 IFLDTRGITTWNKDSVHNKVTRGLNYPKYQNKLLVKIIYARKFNVYFCIAKDFSLKVLNMN-FEETCNVDSDLSSVMFLIFNPVRDELITGGVKGTMVWEFRQDTDRVWTEIKPMANYALFFQRELKCVGGSWVKKIELDQHQQYLYCCSDTDVICYDIHGRL-VFKLVDAHQSQITGCKYSPQAKLLVTCSADTNVKVWS-------------------MTGGH--------------VHTFRGHSRAVTNILLHPESPSVVLTSSMDGSVRLWSLEIMEMLYSIVVSTEG 398
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: C3YAX3_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YAX3_BRAFL) HSP 1 Score: 74.7 bits (182), Expect = 1.580e-10 Identity = 69/275 (25.09%), Postives = 120/275 (43.64%), Query Frame = 1 Query: 16 LDGRGIHSY--DKQGGQNLVKPFSATER--SIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRRIS--SSDRCTSSYSLSLIREFKDCP-KWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDI 819 LD RGI + D G +V+ + +++ + F +Y+V D +L+VY++ V ++LF+ +N D++I+GG G VW+ +R+ + R S+Y L L E+ + W ++ D Q L + Y T L +++I+RAH +T + ++ +VT +KVW+ KG L+ R HS +VT LV H +L+L+SSLD T+++W + Sbjct: 141 LDTRGITCWYSDVIVGHPVVRSLHYPKYMFNVIKKIAFSKKYNVYFTLGKDFSLKVYNKNFDETCKVENHDLKSVLFMLWNPGRDELITGGVGGTKVWQFTKRLEMMADIRPMSNYRLVLKHEWPNVGGSWARYVQLDLNMQHLYCCTETDLYCYSTEGQL-LYKILRAHKTFITGCQFSQHAKLLVTSSHDFEVKVWSI----------------KG-----------------GLVHVFRGHSRSVTQLVLHPATSALVLTSSLDGTVKMWSL 381
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: UPI001B7DE0D5 (uncharacterized protein LOC121279736 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DE0D5) HSP 1 Score: 73.9 bits (180), Expect = 2.550e-10 Identity = 68/277 (24.55%), Postives = 113/277 (40.79%), Query Frame = 1 Query: 4 KVVSLDGRGIHSY--DKQGGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVW--RLVRRISSSDRCTSSYSLSLIREFKDCP-KWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDI 819 K++ LD G S+ D GG F I+ + + +++ D +L+VY++ VL + +A+N K+D++I+GG G W R+ R SS SY L L ++ W+TK+E D+ Q + + YDT L + I H TA ++ + S+ I+T + IK W+ KG+ H+ H+ VT L+ H S+ +SSS D ++R W + Sbjct: 84 KLILLDSLGCVSWSLDPNGGGKRELEFPKHHYGILKQIIYCSKFNTYFALGKDCSLKVYNKDFCETFTVLNLDLKLVKSIAFNPKTDELITGGVGGVKFWKYRMNHRSSSKVVAMPSYELFLRADYPHMGGNWVTKVELDDATQQVFCCSVQALFCYDTEGKLLLE-IPYPHKCSPTACIYSSYSKIILTCSTDCEIKAWS----------------NKGI-FTHK----------------FTGHTRAVTNLLLHPETSSIFISSSKDGSVRFWSL 326
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: A0A024U9D9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9D9_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.320e-10 Identity = 75/299 (25.08%), Postives = 128/299 (42.81%), Query Frame = 1 Query: 10 VSLDGRGIHSYDKQGGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRRISSS-DRC----TSSYSLSLIREF-KDCPKWMTKIEFDEEAQILLVLKGGCVVIY---DTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDIHRLIAVAVIQTSGPHGLLLV 879 V+ D I ++ +G V A ++ ++ +I ++ + S++D +LR YD L+EL + T + +L L ++ ++IISGG +GC W L R + D SY ++ + F K W+ +++ D +A LLVL + +Y D T ++++ +T L F IV C G I V + + KE H+ TVT LV ++ L++SSSLD ++R+WD+ L V ++ P L V Sbjct: 31 VTTDEHTIKLWNTEGETRSVT-LPARTSYLIQTIQYISSRNMYMSSALDGSLRFYDE-SLVELASIFTHRATILCLVFDEPRNRIISGGIDGCSAWLLRGRDTEGYDDAHVIRNPSYQVAPLELFNKTGTSWVRRMKIDADANRLLVLSDNTLFVYNLSDATLVDTYKKLVKGKCGAITDFLVFKKKS-IVASCMDGSIYVVTIYPRSTVAVFKE--------------------------------HTKTVTSLVLDPLS-GLLMSSSLDSSMRMWDLDLLRNVHQLRLDTPLSSLFV 293
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: A0A6P5AS59_BRABE (uncharacterized protein LOC109486518 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AS59_BRABE) HSP 1 Score: 73.2 bits (178), Expect = 4.980e-10 Identity = 70/275 (25.45%), Postives = 118/275 (42.91%), Query Frame = 1 Query: 16 LDGRGIHSY--DKQGGQNLVKPFSATER--SIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRR--ISSSDRCTSSYSLSLIREFKDCP-KWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDI 819 LD RGI + D G +V+ + +++ + F +Y+V D +L+VY++ V ++LF+ +N D++I+GG G VW +R I + R S+Y L L E+ + W ++ D Q L + Y T L +++I+RAH +T + ++ +VT +KVW+ KG L+ R HS VT LV H +L+L+SSLD T+++W + Sbjct: 147 LDTRGITCWYSDVIVGHPVVRSLHYPKYMFNVIKKITFSKKYNVYFTLGKDFSLKVYNKNFDETCSVENHDLKSVLFMLWNPGRDELITGGVGGTKVWEFTKRLEIMADIRPMSNYRLVLKHEWPNVGGSWARYVQLDLNMQHLYCCTETDLYCYSTEGQL-LYKILRAHKTFITGCQFSQHAKLLVTSSHDFEVKVWSI----------------KG-----------------GLVHVFRGHSRGVTQLVLHPATSALVLTSSLDGTVKMWSL 387
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: A0A2G8JV05_STIJA (Uncharacterized protein (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JV05_STIJA) HSP 1 Score: 71.2 bits (173), Expect = 1.930e-9 Identity = 51/201 (25.37%), Postives = 97/201 (48.26%), Query Frame = 1 Query: 10 VSLDGRGIHSYDKQGGQNLVK---PFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVW---RLVRRISSSDRCTSSYSLSLIREFKDCP-KWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHRIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWA 591 + LD RGI ++ K G N V F + +++ S+ F +++V + D +L+V ++ E + +++F+ +N D++I+GG G +W ++ RI + + ++Y L L ++ W+ K+E +E+ Q L V YD + +I RAH +T + S+ +VTG +KVW+ Sbjct: 2 ILLDTRGITTWTKDGISNSVSRSLSFPKYQNNLLRSIIFAKKFNVYFCLAHDFSLKVLNKN-FEETCTADSDLSSVMFMVFNPIRDELITGGVNGTKIWEFKQIADRIWTEIKPMANYGLFLKKQLDSVGGSWVRKLELNEKMQHLYCCSDTDVSCYDMDGKF-LFKISRAHNSQITGCKYSPQSKVLVTGSFDTEVKVWS 200
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: A0A8J5IVB9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IVB9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.680e-9 Identity = 69/298 (23.15%), Postives = 124/298 (41.61%), Query Frame = 1 Query: 10 VSLDGRGIHSYDKQ-GGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRRISSSDR--CTSSYSLSLIREF------------KDCPK----------WMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVHR---IIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDI 819 VS+D + + Q GGQ + A + ++ +I + + S++D LR+YD L EL L T + +L L ++ + +++++GG +GC W++ R S + Y + + +F K PK W+ +++ E L + +++T + R + A LTA + ++Y+V G S G I V + HH + I H + H+ T+T L H + L++SSSLD ++RLWD+ Sbjct: 33 VSVDDACLRLWRAQTGGQLRIVSLPARTTRFIQAITYIDARQIFVASALDGALRLYDPN-LNELAALFTGRGTVLSLVFDGQHNRLLTGGVDGCTAWQIKPRPSGMPEGALNAHYEFTHLPKFFHGTAITHSSRNKPQPKSPNASLGRAGWVERLQLGPENTRLYAQTRHWIDVFNTVDGAHLERWDDLFSAEHGTLTAFVVQERAKYLVCGTSSGAIVVLS-HHP---------------ITIVH----------------VFKDHTQTITSLTEHAAS-RLVISSSLDGSVRLWDL 296
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: A0A5D6XGJ7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGJ7_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 9.630e-9 Identity = 76/322 (23.60%), Postives = 125/322 (38.82%), Query Frame = 1 Query: 10 VSLDGRGIHSYDKQGGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRRI---SSSDRCTSSYSLSLIREFKDCPK---------------------------------------------WMTKIEFDEEAQILLVLKGGCVVIYDTTTN--LEVHRII--RAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDI 819 VS D + + G+ A S + ++ ++ + + +++D TL++YD L EL + T + A+L L ++ K +++SGG +GC W LVR +S SY LSL+ F P W+ ++ + + L CV ++ LE +R + + +G L A + +QYIV GC G++ V + H V + H + H+ VTGL H + +LILSSSLD T+RLWD+ Sbjct: 54 VSSDDTCLRLWSALKGELRRVELPARTSSFIQAIVYVESRQLYVAAALDGTLKIYDA-SLSELASVFTGRGAILSLVFDAKHGRLLSGGVDGCAAW-LVRGKPVGASESSVNPSYELSLLPTFFSAPPASTPTASSPADSNGHDPGATTAASARAGVGSSRKRGAVEPPHQRAWVCNLQLNADKTRLYAQSKQCVDVFSAADGRFLETYRDLFPKEYGAIL-AFVVHEKTQYIVCGCLNGWVFVVSLHP----------------VSVVH----------------VFKDHTLRVTGLAVHS-SSNLILSSSLDGTVRLWDL 339
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Match: W4GXI0_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXI0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.290e-8 Identity = 72/299 (24.08%), Postives = 130/299 (43.48%), Query Frame = 1 Query: 16 LDGRGIHSYDKQGG-QNLVKPFSATERSIVCSLCFIPRYDVIIVSSMDTTLRVYDRRKLLELVVLPTRKMALLFLAYNNKSDQIISGGSEGCHVWRLVRRISSSDRCTS------SYSLSLIREF-KDCPKWMTKIEFDEEAQILLVLKGGCVVIYDTTTNLEVH---RIIRAHGVPLTAGLWFTDSQYIVTGCSQGFIKVWACHHKDRGTAPKELRKKGKGVKIAHRKRRRTATMKQPALLKSIRKHSHTVTGLVAHRVNCSLILSSSLDQTLRLWDIHRLIAVAVIQTSGPHGLLLV 879 +D R I ++ +G +N+ P A ++ ++ +I ++ + S++D +LR YD L+EL + T + +L L ++ ++I+SGG +GC W L+R + S SY ++ + F K W+ +++ D ++ LLVL + +Y+ V ++++ +T L F IV C G I V + + KE H+ TVT L ++ L+ SSSLD ++R+WD+ L V ++ P L V Sbjct: 51 IDERTIKLWNTEGEIRNVTLP--ARTSYLIQTIEYISSRNMYMASALDGSLRFYDDT-LVELASIFTHRATILCLVFDEPRNRILSGGIDGCSAW-LLRGKDTEGYDDSHVIRNPSYQVAPLDLFNKTGTSWVRRMKIDADSNRLLVLSENTLYVYNLADAAHVDTYKKLVKGKCGAITDFLVFKKKS-IVASCMDGSIYVVTIYPRSTVAVFKE--------------------------------HTKTVTSLALDPIS-GLLFSSSLDNSIRMWDLDLLRNVHQLRLDTPLSSLFV 311 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig77.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig77.4.1 >prot_C-tenellus_contig77.4.1 ID=prot_C-tenellus_contig77.4.1|Name=mRNA_C-tenellus_contig77.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=433bp LKVVSLDGRGIHSYDKQGGQNLVKPFSATERSIVCSLCFIPRYDVIIVSSback to top mRNA from alignment at C-tenellus_contig77:16245..18662+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig77.4.1 ID=mRNA_C-tenellus_contig77.4.1|Name=mRNA_C-tenellus_contig77.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2418bp|location=Sequence derived from alignment at C-tenellus_contig77:16245..18662+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig77:16245..18662+ >mRNA_C-tenellus_contig77.4.1 ID=mRNA_C-tenellus_contig77.4.1|Name=mRNA_C-tenellus_contig77.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1299bp|location=Sequence derived from alignment at C-tenellus_contig77:16245..18662+ (Choristocarpus tenellus KU2346)back to top |