mRNA_C-tenellus_contig766.7.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: D8LC93_ECTSI (CCHC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC93_ECTSI) HSP 1 Score: 179 bits (454), Expect = 6.390e-54 Identity = 87/111 (78.38%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHIQPLVDGAAVGQVSRKRE 333 MPATAGRVRMPH NR+SSSSALKMTGIWTNTIGYDPYAAE G ED NA+EQAQGLMALAKLSNQGVTEQRGACKKCG VGHLT QCRNHIQP+ GA + V+ + + Sbjct: 1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 111
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A835YWX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX5_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.420e-52 Identity = 89/123 (72.36%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDG---AQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHIQ----PLVDGAAVGQVSRKREDVEDS 348 MPATAGRVRMPHNNR+SSSSALKMTGIWTNTIGYDPYAAE G A D++NAYEQAQGLMALAKLSN+GVTE RGACKKCGMVGHLT QCRNH+Q P G+V E++E S Sbjct: 1 MPATAGRVRMPHNNRVSSSSALKMTGIWTNTIGYDPYAAEGGEAAAAAAADAENAYEQAQGLMALAKLSNEGVTESRGACKKCGMVGHLTFQCRNHLQGALIPEPGAKGAGKVGAAGEELESS 123
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A2D4C9D1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9D1_PYTIN) HSP 1 Score: 150 bits (380), Expect = 7.820e-45 Identity = 74/94 (78.72%), Postives = 81/94 (86.17%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+ALKMTGIW NTIGYDPYAAE Q + SQ++YEQA+GLMALAKLSNQG E RGACKKCGM+GHLT QCRN + Sbjct: 1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEGEEQQGQVSQSSYEQAKGLMALAKLSNQG-NEVRGACKKCGMLGHLTFQCRNFL 93
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A2P4YHG3_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHG3_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.760e-42 Identity = 71/94 (75.53%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+ALKMTGIW +TIGYDPYAAE + E S+ +YEQA+GLMALAKLSN+ + RGACKKCGMVGHLT QCRNH+ Sbjct: 1 MPATAGRVRMPHNNRMHSSAALKMTGIWKDTIGYDPYAAE--GEKKETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A329RX20_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX20_9STRA) HSP 1 Score: 148 bits (374), Expect = 6.400e-42 Identity = 73/94 (77.66%), Postives = 81/94 (86.17%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+ LKMTGIW NTIGYDPYAAE G Q E S+ +YEQA+GLMALAKLSN+ ++ RGACKKCGMVGHLT QCRNH+ Sbjct: 1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAE-GEQQGETSETSYEQAKGLMALAKLSNKS-SDVRGACKKCGMVGHLTFQCRNHL 92
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A8K1FHX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHX2_PYTOL) HSP 1 Score: 147 bits (370), Expect = 1.970e-41 Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPA+AGRVRMPHNNRM SS+ALKMTGIWTNTIGYDPYAAE G + E SQ++YEQAQGLMALAKLSN+ + RGACKKCGM+GHLT QCRN + Sbjct: 1 MPASAGRVRMPHNNRMHSSAALKMTGIWTNTIGYDPYAAE-GEEKKEVSQSSYEQAQGLMALAKLSNKS-NDVRGACKKCGMLGHLTFQCRNFL 92
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A6A3SK00_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SK00_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.170e-41 Identity = 73/94 (77.66%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+ALKMTGIW NTIGYDPYAAED Q E S ++EQA+GLMALAKLSN+ + RGACKKCGMVGHLT QCRNH+ Sbjct: 1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEDEKQ--ETSDTSFEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A0W8C9S2_PHYNI (CAX-interacting protein 4 n=17 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9S2_PHYNI) HSP 1 Score: 146 bits (369), Expect = 3.180e-41 Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+ LKMTGIW NTIGYDPYAAE G + E S+ +YEQA+GLMALAKLSN+ + RGACKKCGMVGHLT QCRNH+ Sbjct: 1 MPATAGRVRMPHNNRMHSSATLKMTGIWXNTIGYDPYAAE-GEKQGETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 92
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A3M6VM93_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM93_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.940e-41 Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHIQPL 291 MPAT+GRVRMPHNNRM SS+ALKMTGIW NTIGYDPYAAED + E ++ +YEQA+GLM LAKLSN+G ++ RGACKKCG VGHLT QCRNH+ L Sbjct: 15 MPATSGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAED--EKKETTETSYEQAKGLMTLAKLSNKG-SDVRGACKKCGKVGHLTFQCRNHLGEL 108
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Match: A0A5D6YD99_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD99_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.430e-41 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 1 MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQNAYEQAQGLMALAKLSNQGVTEQRGACKKCGMVGHLTIQCRNHI 282 MPATAGRVRMPHNNRM SS+AL+MTGIW NTIGYDPYAAED + + S++AYEQA+GLMALAKLSN+ + RGACKKCGMVGHLT QCRNH+ Sbjct: 1 MPATAGRVRMPHNNRMHSSAALQMTGIWKNTIGYDPYAAED--EEKKVSESAYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig766.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig766.7.1 >prot_C-tenellus_contig766.7.1 ID=prot_C-tenellus_contig766.7.1|Name=mRNA_C-tenellus_contig766.7.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=131bp MPATAGRVRMPHNNRMSSSSALKMTGIWTNTIGYDPYAAEDGAQVDEDSQback to top mRNA from alignment at C-tenellus_contig766:14742..16737+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig766.7.1 ID=mRNA_C-tenellus_contig766.7.1|Name=mRNA_C-tenellus_contig766.7.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1996bp|location=Sequence derived from alignment at C-tenellus_contig766:14742..16737+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig766:14742..16737+ >mRNA_C-tenellus_contig766.7.1 ID=mRNA_C-tenellus_contig766.7.1|Name=mRNA_C-tenellus_contig766.7.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=393bp|location=Sequence derived from alignment at C-tenellus_contig766:14742..16737+ (Choristocarpus tenellus KU2346)back to top |