mRNA_C-tenellus_contig7652.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7652.1.1
Unique NamemRNA_C-tenellus_contig7652.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A6H5JWY7_9PHAE (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWY7_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 1.450e-151
Identity = 237/379 (62.53%), Postives = 282/379 (74.41%), Query Frame = 3
Query:  144 APPASVHQRATIGHP---AGVPTLHGERVADELFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLATTSHTRRELR 1271
            AP A     A   HP   A  P   G+     L S + + L ++LGG GRAKMVW ALS G DP   G+++  LT KT  VL+ T + +PW+VVRE+ S CGTRKLL++LEDGLE ETV+IPD++G+RSTVCVSSQIGCA+ CQFCMTGKMG +RNLT  EIL QV+F+R  VREH MP L+N V+MGMGEPL N  AV  +L+ L  P  FA+AK KISVSTVGPSP AIR M  MP+RLAWSVHAATD+VRR LVPTT HTM ELRDAF +V + R REHLFVEV LI+G+NDS E+A  LA LLRPLP RA INLLP ND GHP F+AS  E+V  FQ VL QEG++ATIR+ARG  ES+ACGQLATT+++ R L+
Sbjct:   37 APKAGATAVAHTAHPPAPAPKPVPGGD-----LLSLNFDELSQILGGSGRAKMVWSALSAGVDPF--GDAAEFLTDKTAAVLKDTVERLPWQVVRESVSSCGTRKLLVQLEDGLEVETVVIPDLSGSRSTVCVSSQIGCAKNCQFCMTGKMGLVRNLTAGEILGQVFFARETVREHGMPPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHTMAELRDAFGEVLQSRRREHLFVEVVLIKGMNDSPELARALASLLRPLPIRAGINLLPYNDTGHPFFRASPKESVEEFQRVLTQEGFVATIRTARGDEESSACGQLATTANSERVLK 408          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A835Z3N5_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N5_9STRA)

HSP 1 Score: 367 bits (943), Expect = 1.890e-120
Identity = 186/334 (55.69%), Postives = 239/334 (71.56%), Query Frame = 3
Query:  246 LEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNLL-TPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLAT 1244
            ++ L   L G+GR + +WKALSQG  P    E+ +++      E     +    W+V +E+ + CGTRKLLL++EDG E ETV+IP   G+R+TVCVSSQ+GC RAC FC TG+MGFIRNL+  EILAQV+++RR  R  +MP L N+VFMGMGEPL+N QAV+  L +L D +MFA  +  ISVSTVGP+P AIR M  MPARLAWSVHAATD+VR+ LVPTT HTM ELRDAF++V   RG+EHLFVEV ++ G+NDS + A  +  LL  LP R  +NLLP NDIGH +++ S+PE +  FQ +L   G +AT+RS RG  E+AACGQLAT
Sbjct:    1 MQELAHHLSGLGRGRALWKALSQGYFP---AEADHIIGAGGMREAKHKNWGSFGWEVTKESLANCGTRKLLLRMEDGAEIETVLIPSFDGSRTTVCVSSQVGCNRACSFCATGRMGFIRNLSADEILAQVFYARRAARLAEMPPLDNIVFMGMGEPLNNAQAVKLALRQLTDGNMFAFGRSHISVSTVGPTPNAIRQMVDMPARLAWSVHAATDDVRKQLVPTTAHTMEELRDAFAEVLLHRGKEHLFVEVTMLDGINDSPDHAQAMVQLLSTLPGRTRVNLLPYNDIGHLSYRPSSPETIEEFQRILQAGGLVATVRSTRGAGEAAACGQLAT 331          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A0G4FWR1_VITBC (Radical SAM core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FWR1_VITBC)

HSP 1 Score: 312 bits (799), Expect = 1.810e-97
Identity = 170/354 (48.02%), Postives = 230/354 (64.97%), Query Frame = 3
Query:  231 LFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNL-LTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREH--QMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREH------------LFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLATT 1247
            L S S+E L   +GG GRA+ +W+AL +G+ P+D  +S+   L+ +    L    + +P++V+ E  S CGT KLL++L DG   ETVIIP   G  ST+CVSSQIGCARAC+FC TG+MG +RNL   EILAQV+F+ R VRE   + P + N VFMGMGEPL+N +AV+  ++ + DP  F + +  I+VSTVGPSP +IRL+  +P  +AWSVHAA DNVRR LVPTT H M +LRDAF+D+   R  +H            + VE  L+ G+NDS E A  L +L+R LP    +NLLP NDIG P ++ S    V A+ + + + G + ++R ARG  + AACGQLATT
Sbjct:   87 LLSLSVEELASSVGGTGRARRIWEALRKGQLPIDIDDSTEKPLSHRALTRLLEATQLLPYEVINETVSACGTVKLLVRLRDGHGVETVIIPSEKG-HSTLCVSSQIGCARACRFCKTGQMGLMRNLGADEILAQVFFAHRWVRESDGRTPPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIPVHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEPKVNLLPYNDIGVPGYRRSPEAKVAAYLECVREGGVMCSVRRARGDEDMAACGQLATT 439          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A7S4ESN9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ESN9_CHRCT)

HSP 1 Score: 306 bits (783), Expect = 1.010e-95
Identity = 166/332 (50.00%), Postives = 214/332 (64.46%), Query Frame = 3
Query:  264 LLGGVGRAKMVWKALSQGRDPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLN------DIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLA 1241
            LLGG GRA+ +W+ L QG DP D  E +   TP+    L  +      + + ++ S CGTRKLLL+LEDGL  E V+IP   G  STVCVSSQ+GC R C FC TG MG  R+LTT EIL Q++ +    + + MP + N+VFMGMGEPL N  +V++ LE + DP  FA++KK + VSTVGPSP++IR + ++ ARLAWSVHAA D++R+ LVPTT H+M ELRDAF+ V   R    L VE+ALI GVND    A  L  LLRPLP +  +NL+P N       +G   FK S+  +V  FQ  L++   I T+R  RG  ESAACGQLA
Sbjct:   61 LLGGAGRARAIWEQLRQGVDPFD--EDALPKTPRARARLLSSLSPPAAETIAQSDSSCGTRKLLLRLEDGLSVECVVIPSPNGLFSTVCVSSQVGCMRGCAFCATGAMGLTRSLTTHEILEQLFAALVACKRNGMPPIRNIVFMGMGEPLDNLDSVKSALEVMQDPFGFALSKKHLCVSTVGPSPQSIRALTSVGARLAWSVHAAEDSLRKLLVPTTAHSMAELRDAFAQVLAERNDRGLMVEIALIDGVNDGLADAEALHALLRPLPGKTRVNLIPYNVNEGLGAVGR-QFKPSSSSSVSRFQKYLIERELICTVRETRGDGESAACGQLA 389          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A2E6VQA8_9DELT (Radical SAM core domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VQA8_9DELT)

HSP 1 Score: 296 bits (757), Expect = 1.660e-92
Identity = 158/351 (45.01%), Postives = 218/351 (62.11%), Query Frame = 3
Query:  231 LFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQ-MPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLATTSHTRRELRTAE 1280
            + S S + L + L G GRAK +W  L  G+DP  +      L  K    L         +V     SPCGT KL + L+D LE ETV+IP     R+TVC+SSQ+GCAR C FC TG+M  IRNL   EIL QVY +RRC++E Q +P   N+VFMGMGEPL+N + V+  + +++ P  FA+  K+I++STVGPSP  I+ +  +P R+AWS+HAA D  R+ LVPTT+H++  L DAF+DV   R +E LF+E+ LI  VND +E AH L   L+ LP  + +NL+P+N     +F   TPE +++F+ +L + GY  ++R +RG  E+AACGQL T       LRT E
Sbjct:    6 ILSCSFDALAQTLAGSGRAKAIWSLLRNGQDPFQAP-----LGKKLTRALNQNLTAFDERVTTRHQSPCGTLKLGIALQDKLEVETVLIP--MNGRTTVCISSQVGCARGCTFCSTGQMNLIRNLKAHEILFQVYAARRCIQESQDLPPFRNIVFMGMGEPLNNFEEVKKAITQMVHPLTFAIGAKRITLSTVGPSPSLIQKLKTLPTRIAWSIHAAEDTKRQRLVPTTKHSIAALTDAFADVLH-RKKEGLFIELTLIDNVNDRDEDAHHLVTCLKRLPGESRVNLIPVNPTPGNSFAPPTPERIQSFRAILHEAGYFCSVRPSRGDEEAAACGQLIT-------LRTQE 341          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A7S2W4X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4X2_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.860e-90
Identity = 174/390 (44.62%), Postives = 231/390 (59.23%), Query Frame = 3
Query:  180 GHPAGVPTLHGERVADELFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSG-------ESSNLLTPKTE-EVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPTRASINLLPLNDIG-----------HPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLA---TTSHTRRELRTAEP 1283
            G P  V ++  E     L ++    L  +L    RA+ VWK +++G DP           E++ LL      E  RG         V + A+  GT K+L+ L+DGL AETV+IP    +R+T+CVSSQ+GCARAC FC TG MG IR+L   EIL Q++   +  +  ++P L+NVVFMGMGEP  N + V      +++   F +    ISVSTVGPSPEAI  + ++P RLAWSVHAA D+VRR LVPTTRH+MVELRDAF+ V   R    LFVEVAL++G+NDS   A  LA+LLRPLP +  +NLLP N              H  F+  +PE V+ FQDVL  EG++ T+RS RG   ++ACGQLA   + S +RR  +   P
Sbjct:   24 GRPLAVSSVGSEV---RLLATPPSALAPVLASQSRAQRVWKTIAEGLDPFGMDMPQELGREAAKLLREAFPLEAARGELCTGVDAAVGDVAAD-GTTKILVHLQDGLMAETVLIP--TDSRTTICVSSQVGCARACAFCSTGAMGLIRSLDAHEILGQLFAGMQEAQRRELPPLTNVVFMGMGEPADNLEQVHLAARTMVEG--FRLGNSHISVSTVGPSPEAIEALESLPTRLAWSVHAAEDDVRRVLVPTTRHSMVELRDAFARVLARRRDRGLFVEVALVEGLNDSPHHALALAELLRPLPGKTRVNLLPYNPFAPEASDLPRAQAHALFRTPSPETVKTFQDVLYSEGFVCTVRSTRGADSASACGQLANRASLSQSRRPSKEVPP 405          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A7S0VC70_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VC70_9CRYP)

HSP 1 Score: 292 bits (748), Expect = 1.420e-89
Identity = 166/343 (48.40%), Postives = 215/343 (62.68%), Query Frame = 3
Query:  255 LGELLGGVGRAKMVWKALSQGRDPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPD--------VAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREH--LFVEVALIQGVNDSEEMAHELADLLRPLPTRAS---INLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLAT 1244
            LG LLGG G+AKMVW++L  G  P ++ E   ++T K   +L  +F+ +P  V  E+ +  GT KLL+ L+DGL+ E+V+IP+        V   R+T+CVSSQ+GC RAC FC TGKMGFIR LT+ EIL+QV+   R VRE  +P L N+VFMGMGEPL+N   V    + L     F  A+ +++VSTVGPSP AIR  G +PA LAWSVHAA D +RR LVPTT HTM ELRD F  V   R R+     V V LI G+ND EE A  L +LLRP+        ++L+P NDIG   ++ +  + V AFQ  L   G+   +R  RG   +AACGQLAT
Sbjct:  117 LGRLLGGTGKAKMVWESLRDGVSPWENRE---VVTDKARALLERSFQGIPG-VSLESVAGDGTTKLLVDLDDGLQVESVVIPNKGKPSAQGVVEPRTTLCVSSQVGCNRACDFCATGKMGFIRQLTSHEILSQVFHGLRVVRERGLPPLHNIVFMGMGEPLNNPLHVMRATDILTRDKCFGFARSRVTVSTVGPSPAAIRAAGDLPAMLAWSVHAADDELRRRLVPTTAHTMEELRDTFKSVLSKRSRQMSTFMVAVTLIDGLNDGEEQADALVELLRPIQEVVKGLVVDLIPYNDIGEAAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDGNAACGQLAT 455          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: W7TTG9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTG9_9STRA)

HSP 1 Score: 291 bits (744), Expect = 2.400e-88
Identity = 167/368 (45.38%), Postives = 226/368 (61.41%), Query Frame = 3
Query:  225 DELFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNL----LTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAG---------------------TRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPA-RLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLP-TRASINLLPLNDIGHPTFKASTPEAVRAFQD-VLVQEGYIATIRSARGTSESAACGQLAT 1244
            + +     +GL  +L G GRA+MVW+A+ +G DP ++  +S +    +T +T  +L+       W +V+  +S CGT KLL++L DGL  ETV+IP   G                     +RSTVCVSSQ+GCA+AC FC+TG MGF+R+L+  EIL QV  + + VR   +P L NVVFMGMGEPL+N +AV+  L  + DPH FA++   I++STV PSP  +R    MP  RLAWSVH A D +RR LVPTT  +MVELR+AF +V   RG  ++F+EV LI+GVNDS + A  L +LLRP   T   +NL+P ND G   +  S P  + AFQ  V    G++   R+ RG  ES+ACGQLAT
Sbjct:  133 ETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A7S0TZU8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TZU8_HEMAN)

HSP 1 Score: 289 bits (739), Expect = 2.750e-88
Identity = 165/343 (48.10%), Postives = 212/343 (61.81%), Query Frame = 3
Query:  255 LGELLGGVGRAKMVWKALSQGRDPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPD--------VAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREH--LFVEVALIQGVNDSEEMAHELADLLRPLPTRAS---INLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSESAACGQLAT 1244
            LG LLGG G+AKMVW++L  G  P ++ E    +T K   +L  +F  +P  V  E+ +  GT K+L+  EDGL+ E+V+IP+        V   R+T+CVSSQ+GC RAC FC TGKMGFIR LT+ EIL+QV+   R VRE  +P L N+VFMGMGEPL+N   V    + L     F  A+ +++VSTVGPSP AIR  G MPA LAWSVHAA D +RR LVPTT H+M ELRD F  V   R R+     V V LI  +ND EE A  L +LLRP+        I+L+P NDIG   ++ +  + V AFQ  L   G+   +R  RG  ++AACGQLAT
Sbjct:  113 LGRLLGGTGKAKMVWESLRCGLSPWENTEG---VTEKARTLLERSFLRIP-AVSLESVAVDGTTKMLVDFEDGLQVESVVIPNQGRPSAQGVVEPRTTLCVSSQVGCNRACDFCATGKMGFIRQLTSHEILSQVFHGLRVVRERNLPPLHNIVFMGMGEPLNNPLNVMRATDILTQDKCFGFARSRVTVSTVGPSPAAIRAAGDMPAMLAWSVHAADDELRRKLVPTTAHSMEELRDTFKSVLSKRSRQMSTFMVAVTLIHDLNDGEEQADALVELLRPIQEVVKGLVIDLIPYNDIGEVAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDDNAACGQLAT 451          
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Match: A0A4D9DBV9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBV9_9STRA)

HSP 1 Score: 287 bits (734), Expect = 3.490e-88
Identity = 165/368 (44.84%), Postives = 225/368 (61.14%), Query Frame = 3
Query:  225 DELFSSSLEGLGELLGGVGRAKMVWKALSQGRDPLDSGESSNL----LTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLEDGLEAETVIIPDVAG---------------------TRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEILAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMFAVAKKKISVSTVGPSPEAIRLMGAMPA-RLAWSVHAATDNVRRYLVPTTRHTMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLP-TRASINLLPLNDIGHPTFKASTPEAVRAFQD-VLVQEGYIATIRSARGTSESAACGQLAT 1244
            + +     +GL  +L G GRA+MVW+A+ +G DP ++  +S +    +T +T  +L+       W +V+  +S CGT KLL++L DGL  ETV+IP   G                     +RSTVCVSSQ+GCA+AC FC+TG MGF+R+L+  EIL QV  + + VR   +P L NVVFMGMGEPL+N +AV+  L  + DPH FA++   I++STV PSP  +R    MP  RLAWSVH A D +RR LVPTT  +MVELR+AF +V   RG  ++F+EV LI+GVNDS + A  L +LLRP   T   +NL+P ND G   +  S    + AFQ  V    G++   R+ RG  +S+ACGQLAT
Sbjct:   27 ETILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLIRLHDGLMVETVVIPARLGPRSNGLARGMSREAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSMDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPSGNILAFQTYVRAHGGWLTFARTPRGREDSSACGQLAT 394          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWY7_9PHAE1.450e-15162.53Radical SAM core domain-containing protein n=2 Tax... [more]
A0A835Z3N5_9STRA1.890e-12055.69Radical SAM core domain-containing protein n=1 Tax... [more]
A0A0G4FWR1_VITBC1.810e-9748.02Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S4ESN9_CHRCT1.010e-9550.00Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2E6VQA8_9DELT1.660e-9245.01Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S2W4X2_9STRA1.860e-9044.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0VC70_9CRYP1.420e-8948.40Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
W7TTG9_9STRA2.400e-8845.38Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S0TZU8_HEMAN2.750e-8848.10Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A4D9DBV9_9STRA3.490e-8844.84Radical SAM core domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7652contigC-tenellus_contig7652:1120..6418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQQ6
PFAMsRadical_SAM
Model size1652
Max annot lvl2759|Eukaryota
KEGG koko:K06941
Hectar predicted targeting categorysignal anchor
Exons6
Evalue1.49e-153
EggNOG OGsCOG0820@1|root,2QV91@2759|Eukaryota
Ec32 ortholog descriptionRibosomal RNA large subunit methyltransferase RlmN/Cfr
Ec32 orthologEc-01_000140.1
EC2.1.1.192
DescriptionRadical SAM superfamily
Cds size1296
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7652.1.1prot_C-tenellus_contig7652.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7652 1140..6082 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790049.9054003-UTR-C-tenellus_contig7652:1119..11391680790049.9054003-UTR-C-tenellus_contig7652:1119..1139Choristocarpus tenellus KU2346UTRC-tenellus_contig7652 1120..1139 +
1680790049.9908175-UTR-C-tenellus_contig7652:6082..64181680790049.9908175-UTR-C-tenellus_contig7652:6082..6418Choristocarpus tenellus KU2346UTRC-tenellus_contig7652 6083..6418 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790049.9241152-CDS-C-tenellus_contig7652:1139..15291680790049.9241152-CDS-C-tenellus_contig7652:1139..1529Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 1140..1529 +
1680790049.9333985-CDS-C-tenellus_contig7652:1693..18001680790049.9333985-CDS-C-tenellus_contig7652:1693..1800Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 1694..1800 +
1680790049.9429946-CDS-C-tenellus_contig7652:2160..23111680790049.9429946-CDS-C-tenellus_contig7652:2160..2311Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 2161..2311 +
1680790049.956141-CDS-C-tenellus_contig7652:3298..35671680790049.956141-CDS-C-tenellus_contig7652:3298..3567Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 3299..3567 +
1680790049.9683173-CDS-C-tenellus_contig7652:4522..47891680790049.9683173-CDS-C-tenellus_contig7652:4522..4789Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 4523..4789 +
1680790049.9794412-CDS-C-tenellus_contig7652:5970..60821680790049.9794412-CDS-C-tenellus_contig7652:5970..6082Choristocarpus tenellus KU2346CDSC-tenellus_contig7652 5971..6082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7652.1.1

>prot_C-tenellus_contig7652.1.1 ID=prot_C-tenellus_contig7652.1.1|Name=mRNA_C-tenellus_contig7652.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=432bp
MIGTLRPCCLATLRISSGRYPVYYRWKALLSLCFIIYVAGLAPPASVHQR
ATIGHPAGVPTLHGERVADELFSSSLEGLGELLGGVGRAKMVWKALSQGR
DPLDSGESSNLLTPKTEEVLRGTFKDMPWKVVREAASPCGTRKLLLKLED
GLEAETVIIPDVAGTRSTVCVSSQIGCARACQFCMTGKMGFIRNLTTAEI
LAQVYFSRRCVREHQMPTLSNVVFMGMGEPLSNQQAVQTTLERLIDPHMF
AVAKKKISVSTVGPSPEAIRLMGAMPARLAWSVHAATDNVRRYLVPTTRH
TMVELRDAFSDVFKGRGREHLFVEVALIQGVNDSEEMAHELADLLRPLPT
RASINLLPLNDIGHPTFKASTPEAVRAFQDVLVQEGYIATIRSARGTSES
AACGQLATTSHTRRELRTAEPDRNDGPSLTG*
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mRNA from alignment at C-tenellus_contig7652:1120..6418+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7652.1.1 ID=mRNA_C-tenellus_contig7652.1.1|Name=mRNA_C-tenellus_contig7652.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5299bp|location=Sequence derived from alignment at C-tenellus_contig7652:1120..6418+ (Choristocarpus tenellus KU2346)
CAGATACAACCCCCTGAATCATGATTGGAACCTTGCGACCTTGCTGTTTG GCAACTTTACGGATTAGCTCGGGTAGATATCCGGTATACTATAGATGGAA GGCATTGCTGTCACTCTGCTTCATCATCTATGTGGCAGGCTTAGCTCCAC CCGCATCTGTTCACCAACGTGCAACCATAGGACACCCAGCAGGTGTCCCT ACATTACATGGGGAACGAGTTGCAGATGAACTCTTCTCATCGAGTTTGGA GGGCCTCGGGGAATTGCTGGGAGGTGTAGGAAGAGCTAAAATGGTATGGA AGGCCCTTTCTCAGGGACGAGATCCGCTCGACTCAGGAGAAAGTAGCAAT CTGTTGACACCAAAGACAGAGGAGGTGCTGAGAGGAACGTTTAAGGATAT GCCATGGAAGGTGAATCTCGTCCTTAGGCGGAAGATCTAGTAAACCATCT ACATTCTTCATGCTCCCCGCCAAACGTTTCCTTAAGGATACGAATTGTCA TTGCGGCGAAGCCTATTATTTGCTCTCGTGGTTGAGGTGTATGTTCATGA CCAACCGTCCTCGAACTCTTCCAGGTTGTACGAGAAGCAGCTTCTCCTTG CGGCACTCGCAAACTACTCCTGAAATTGGAGGATGGCCTCGAGGCAGAAA CGGTTATCATCCCGGATGTTGCAGGCACAAGGTATATGGTAGGGAGGTTT TTGCGTTGTGAAGGTCTTTAGTCAAGGTGTGTAATGCTCGCCTTGGAGTG ATTGTAGTGGAATGCAAAGTTATCAGTTCCACTTGGATGAAAGCGATTCT GCTCTTTGATGATGGTTAATTTTTCTAGTAAGGATACCACAACTCTCGCA ATTGTCGAGTTGAAATGTTGGTTGGTGGATACGACAAGAACCATCAGGTG GGTGTGACTGCTGTCGACCTATGCTTTCCATGTAGTGACTTGGGAGGACT TTCCCTGTAAATAATGCATTCATTGCCTTCCTCGTGCTAGTGGTCGAACC ATTCGTTCCACATACATGCGTGCACCTATCCGTGAGAGCAGGAGCACGGT TTGCGTCTCCAGTCAGATCGGATGCGCCCGTGCTTGTCAGTTCTGTATGA CGGGAAAAATGGGTTTCATTAGGAACCTAACCACAGCGGAGATTCTAGCA CAGGTGTATTTTTCCCGGCGCTGTGTGAGGGAACACCAAATGGTGAGTTC AGCGGATCCCAATTGTAGACCTAAGTATATTGATGCACACTCTGAATCTA ATACTTTGATTTGTCATACTACTCAACATGAAGGCCCCACCCTATTCTAT CCTGTGTCATCCTAGTTTCAATCTAACACTTATACCATAACGTGTTAATC GTGTTAATCATTTATCTTATTCTCCTTGAACTCTTACTTTTGGCAACCCC TATTCGCTGTGCCCTACTGTGCATCAATACTTACGCCATAACATGTTAAT CATGATCTTATTCTCATTCAAATCTTACTTTTGGCAACCCCTATCCACTG CGCGCTATTGTGCATCTGTTGAGTTTTTTCTGTTTGATATTCTTCTCTTT CTTCTCCTTATTCTTAATGTAAATCCAACTGGATGCATGACTGCTGGACT GGGGGGTAGAGGGATTTGCGGTGGGGTAATGAGAACCGTGAGAACCCGTA GGGTATAGGCAGATCCCCTCAATAGGGAAGTTAAATGTAGTGAGTAGGAA TGGTTGAATATGGGGATGATTTATTTTTTCAAGGTGAGAGATGGCAACTA TGCTCTAGTAGTAGAGGTGCCAGCTTTCACACTGGAAGATGCAAAAGGGT GCTGATTCAAAGTGGCCAAAACAATTACGGCATCTACAAGTGAATCACTT GTCTCTGTCTTTGGCCACCATGACTTTGCATTCCTCCTTGTCTTCTGGGA TGAAAATTGACTTCTCTACCTCAGCGTTACTTGCCATCCCTCAACAATTG CATTGATACTATCGTCTCAGAGGCAATAGCCTCTTCTCCCCATCTCATGT CGCCTTCTTCTCATCATGATAACGTTTTTTACACTCCTAATATCCCATAG CGCTTATAGTAACTCCTCAACTATTTCCCCTCTGAATCTTCACATTTCTC GACACTCCTGGTCCTGACCTGTCCCTCTGGGCGACCTGGGTCCACGGACC CCCCCACTCACTCCCCCGGATGCTCCTAGCCCACATTGAGTAATGTGGTA TTCATGGGGATGGGGGAACCGCTGTCCAATCAGCAGGCAGTGCAGACAAC ACTGGAGCGGCTGATCGACCCCCACATGTTTGCCGTGGCTAAGAAAAAGA TCTCAGTCAGCACAGTGGGACCCTCGCCAGAAGCCATCAGACTAATGGGA GCCATGCCTGCACGCCTGGCATGGTCTGTTCATGCCGCTACAGATAATGT TCGGCGTTACCTAGTGCCTACAACGAGACACACCATGGTTGAGCTCAGGT GTGTTGTACACTTGTCTTGACCACGGCTAGATGCTCAAATACAAGGGCTG AGGATGGTGGCAGAAGGCAACTGTTTCGTGTGTGTCTACCATGGTAGTGT GAAGCATGTTGCTTTATCGTTGTGCTACCTCTATGCGCTGTTGCTCACAA CTGGTGTTCGCTTTGAGATGAAGAGTGCATGAACAAAGTGGTCCCGAGGT ATGAATAGATGCATGAATACCAAGTTTTGTGTACAGTAAATCTGTACTCT CAGGTGCTGTCCCTCTTGTCTAGTCTTGTGCTAGGCTATGCCTTTACCAT GAACACTTTCAAGAATACTGCAATATGCACTCACGTTATAGGTGCACAAG TCTTTTTTAGTGCAAACCACCGTTAAGAGCAGTTAGCTCTAGGGTGATAT ACATGACATATTGCCCTTTGCTGGGGAGGCTCTGCTGGTGGCATTGGTTT CCTGTCCAACCAAGACGTATGTGCATTTCGCCCCCCCCCAAAAAAAATAT TCACCATATGTTGACGTCTCTTTCCAGGGTTTTTAAGGCTCCCCTCCTTT ACTTGCCTGAATATCAAGGTTCACAAATTCGGTACCCTTCTCCCTCCTAT CTAATCAAATTGCCACTGCCTCTCATCGTTAGCACTCAAGTTCTTGTGAT TGAAATACAACAAGAGTATAGAATAGGGCAGGGCCTAAGATTGTCGTGAG AGACACCTGCACTTACATGTAATTCTCGGATAGATTGTTTTGTAATTGTC TATGCAACGCTAAGCAGTATGGGTGAAACTATTTGCTAACACTATTGTCA CATTGGTTCAAGCAGGGTCTTCAATTGACTCTCCCTGCTTCCTTCTTTTC TTGGCCAAGATAGTCTCATATACACAAGAATGTACTGCCTTGCCTTTTCA TATGTTTCCTGCATGGTCAATGTGCATGCTGTGGTCCTATTTTTTTTTTA CAGGGATGCCTTCAGCGATGTTTTCAAGGGAAGAGGCAGGGAGCACCTTT TTGTGGAGGTGGCACTTATACAGGGGGTCAATGACTCTGAGGAGATGGCG CACGAGCTGGCAGACCTACTGCGGCCCCTACCAACCCGTGCCAGTATCAA CCTCCTCCCCCTCAACGATATTGGGCATCCCACATTCAAAGCATCCACCC CAGAGGCTGTTCGTGCATTTCAGGATGTTCTGGTTCAGGAGGGGTATATT GCAACAATCCGAAGTGCCAGGTGAGAGCTGTTAATACCCTGGAAGACTGC AAAAAGGTTCAGGGGAAGTGGTATGACCCACTCCTCTGATATGTGATGTA TGTCATGGCCAATCAAAGGTACTGATGCGGTTTGTGAACTCCTGGTGAAG ACCGTTTAGCTTGGTACTGGACAAAGAAGAGTGGTAGGTTTAATCGTGGG ATGAAGCTCTTGTGCATCTGATGTAGATTTGATTGGGGTCTTCTTCAAGC CCACCCAAATATTTTTGTTGGACAGTTGGAACATCATCACTACTTGTAGT AGTGATGATGAAGTGGTTGTGATTTTTGTGGCTCATTGTGGTTAAAGATG TACGGCACCGGTGTAATGTACCCTGCTCAGAACCTACAACTTGCTCAAGT TAGAAGTGTCAAGTGCTTTGCCAGATTATCGGAAAGGGTGGCTTGCATCC TCGATGGTGTTACTTCTCCAACAATTCCAAAACTTGGTTGTGAAACCACC AAAGATTTCCTGAGGGTTATGGGGACAACCACGTAATATGCACATGCAGA GAAGCAACCTTTTATATGGAAGCTTACGGCCCACTGGGCTGCCGAGAAAT TCGGAATTTCCGCAATTCCGCGAAGTACGAAATCGGAGGTCATCAGAGTG ATGCGACACTATGAATTAACCCCGAAAAGTATAACAAGTTGTATGTATGT TGTTAACAGTTTCATTTGTATTCATGCCATATCACTAACTAAACGCAAAG CGCCTTGAGAACACTGGAGAGAAGACTATCTGATGAAGGAAATATTTTGT GCTACCTCTTCCGAGTATTTGGAATTCGAAGTATTGAGCTAGACAAGTTG CCATATAACCATGTCTAACCATGCCGCATGTGCTGATGCATTACTGTTGT TGTGATGGATGATGTACTTGGTGAGTTACCTACAATCTGTTAAATCTGAC ACTCCAATATATATATCCACTTAAATGTATAAACACATATTTTCCCTTCA TTCCTGTAAATGTGAAAACAGCTGGAGAAGATGCACCACACCTTTTCATT ATTCTTTTTTGATGTTTTGCAAGTATAACCCAGTTACTGTTCCAAAAAAA TCGGAAGAGGTGGACACTATGTGTTTGCTGCTGCTGCTGTGTGACATTCC CTAATTTCCATCCCTCCAACCTCACTTGTTTGGATTTGTCTGCGGAGATA GGGGTACATCAGAGAGTGCTGCGTGTGGCCAGCTGGCAACTACATCACAC ACAAGGCGGGAATTGAGGACCGCTGAGCCGGATAGAAATGATGGACCATC TCTGACTGGCTAGATGTTTGTACTGATTCCAATCTGTTAATGGAGCAGTG AATATTTTAAGGTTCCGCGTTGTTCAAGGTCAATGACGGTTCAGGAGGAT TCTACTCCAGGGAACATAAATCTCACTACATTTTACTATCGTACCTGCCT TAATGCAGAGTGGGCGCTCTGTGTGTGTGATCAGATGGCCCACAGAGTGA TTCTACAATAACCGGGACATGTACTGTACCTCTATAAATCCTATCGTGAG AGGAATGTATGAATTATACATCTCTACAACATGATGCATCGTGTAAATCA TATGACTTTGCCGATTTTTTTCTTTGGTAGAATCAGTGTGGACTTTGAC
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Coding sequence (CDS) from alignment at C-tenellus_contig7652:1120..6418+

>mRNA_C-tenellus_contig7652.1.1 ID=mRNA_C-tenellus_contig7652.1.1|Name=mRNA_C-tenellus_contig7652.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1296bp|location=Sequence derived from alignment at C-tenellus_contig7652:1120..6418+ (Choristocarpus tenellus KU2346)
ATGATTGGAACCTTGCGACCTTGCTGTTTGGCAACTTTACGGATTAGCTC
GGGTAGATATCCGGTATACTATAGATGGAAGGCATTGCTGTCACTCTGCT
TCATCATCTATGTGGCAGGCTTAGCTCCACCCGCATCTGTTCACCAACGT
GCAACCATAGGACACCCAGCAGGTGTCCCTACATTACATGGGGAACGAGT
TGCAGATGAACTCTTCTCATCGAGTTTGGAGGGCCTCGGGGAATTGCTGG
GAGGTGTAGGAAGAGCTAAAATGGTATGGAAGGCCCTTTCTCAGGGACGA
GATCCGCTCGACTCAGGAGAAAGTAGCAATCTGTTGACACCAAAGACAGA
GGAGGTGCTGAGAGGAACGTTTAAGGATATGCCATGGAAGGTTGTACGAG
AAGCAGCTTCTCCTTGCGGCACTCGCAAACTACTCCTGAAATTGGAGGAT
GGCCTCGAGGCAGAAACGGTTATCATCCCGGATGTTGCAGGCACAAGGAG
CACGGTTTGCGTCTCCAGTCAGATCGGATGCGCCCGTGCTTGTCAGTTCT
GTATGACGGGAAAAATGGGTTTCATTAGGAACCTAACCACAGCGGAGATT
CTAGCACAGGTGTATTTTTCCCGGCGCTGTGTGAGGGAACACCAAATGCC
CACATTGAGTAATGTGGTATTCATGGGGATGGGGGAACCGCTGTCCAATC
AGCAGGCAGTGCAGACAACACTGGAGCGGCTGATCGACCCCCACATGTTT
GCCGTGGCTAAGAAAAAGATCTCAGTCAGCACAGTGGGACCCTCGCCAGA
AGCCATCAGACTAATGGGAGCCATGCCTGCACGCCTGGCATGGTCTGTTC
ATGCCGCTACAGATAATGTTCGGCGTTACCTAGTGCCTACAACGAGACAC
ACCATGGTTGAGCTCAGGGATGCCTTCAGCGATGTTTTCAAGGGAAGAGG
CAGGGAGCACCTTTTTGTGGAGGTGGCACTTATACAGGGGGTCAATGACT
CTGAGGAGATGGCGCACGAGCTGGCAGACCTACTGCGGCCCCTACCAACC
CGTGCCAGTATCAACCTCCTCCCCCTCAACGATATTGGGCATCCCACATT
CAAAGCATCCACCCCAGAGGCTGTTCGTGCATTTCAGGATGTTCTGGTTC
AGGAGGGGTATATTGCAACAATCCGAAGTGCCAGGGGTACATCAGAGAGT
GCTGCGTGTGGCCAGCTGGCAACTACATCACACACAAGGCGGGAATTGAG
GACCGCTGAGCCGGATAGAAATGATGGACCATCTCTGACTGGCTAG
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