mRNA_C-tenellus_contig7646.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7646.1.1
Unique NamemRNA_C-tenellus_contig7646.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: D8LIX9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIX9_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 1.440e-137
Identity = 191/309 (61.81%), Postives = 239/309 (77.35%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAP-RCLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            VLF G TDW  +GRRP+E  ++ P R LSFPK+I++V SGPTACH VCIDV GG Y+WGRNE G LGHGDTA RA PTL+  + G+R+KQASCG++HT +L   G ++ MG GK GQLG GR V+S  EPK V +     ++V+CGA+FT IID  GRL + G P++GQLG GTTGEFIE+AGK+S+D V+ P VV  F  KD ++K ++E R V L DIACG++H VAVE  P  RV+TWGFGGYGRLGHACQD ELRPR+VD LAR++H++++ V+AGA CSLA++  GHLFYWGKLPN+PRGEATM
Sbjct:  119 VLFIGGTDWTALGRRPTEGDILCPKRLLSFPKKIKSVASGPTACHSVCIDVQGGVYTWGRNEFGGLGHGDTAPRAHPTLVAALSGTRMKQASCGKTHTGILAENGTLYMMGGGKLGQLGLGRAVESCTEPKAVEVPGGTVEKVACGAEFTAIIDNRGRLLTFGSPQDGQLGGGTTGEFIEKAGKISYDLVLAPAVVPTFFSKDARTKAIEEFRGVELADIACGKSHGVAVEKGPRARVFTWGFGGYGRLGHACQDQELRPRMVDVLARMTHLKVTKVAAGAGCSLAITENGHLFYWGKLPNAPRGEATM 427          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A836CDF7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF7_9STRA)

HSP 1 Score: 304 bits (778), Expect = 8.300e-97
Identity = 151/314 (48.09%), Postives = 206/314 (65.61%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESF--LVAPRCLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLE---PKQVVLDSKAFKQ-VSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            V+ CG TDWD VG+  +     L +P  L F  RI A++SG TACH + +D  G AY+WGRN+ G  G G   + AAP  +   LG+ V  A+CGR+HTAL+T++G ++T G G  GQLG GR+V        P  + L   A    V+CGADFT ++   GRLF+ G PE GQLG  T GEF     K++FDF  +P  +  F+ +D K KL++    VR   +ACGRNHT+A+E  P +R+++WGFGGYGRLGHA  D E+ PR+++   R+SHV I +++AG  CS+AL++TGHL++WGKLPN+PRGEATM
Sbjct:  106 VVVCGGTDWDTVGKSKATGSGNLYSPHSLQFKTRIVAIYSGSTACHSIAVDASGAAYAWGRNDMGQCGVGSKKSVAAPAKMK--LGAAVVAAACGRAHTALVTSDGGLYTCGCGSSGQLGSGRIVADKTPVTAPASIPLPGGAKAHAVACGADFTVVVATDGRLFAFGHPEYGQLGNDTNGEFFVSGNKIAFDFKPSPFQITEFVKRDEKHKLVETSADVRFCAVACGRNHTIALERPPGKRIFSWGFGGYGRLGHAGSDNEMTPRVINMFERMSHVTIKTLAAGGACSMALATTGHLYFWGKLPNAPRGEATM 417          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A093CVQ5_TAUER (Protein RCC2 (Fragment) n=1 Tax=Tauraco erythrolophus TaxID=121530 RepID=A0A093CVQ5_TAUER)

HSP 1 Score: 232 bits (592), Expect = 4.230e-71
Identity = 133/316 (42.09%), Postives = 185/316 (58.54%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPRCLSFPKR--------IRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R L    R        +R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   11 LLIFGATNWDLIGRKEVPKQQVAYRNLGQTHRYGCLAGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGGEAIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 320          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A7L1IZB9_SMUAF (RCC2 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L1IZB9_SMUAF)

HSP 1 Score: 231 bits (590), Expect = 9.800e-71
Identity = 136/321 (42.37%), Postives = 187/321 (58.26%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   R+R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  V  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   12 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIRVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGGEAVVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGAAQIYAGYPCSFAVSETGGLFFWGAT-NTSR-ESTM 325          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A7K9WF68_9PASS (RCC2 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K9WF68_9PASS)

HSP 1 Score: 233 bits (594), Expect = 2.810e-70
Identity = 135/320 (42.19%), Postives = 183/320 (57.19%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPRCLSFPK------------RIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+       A R L                R+R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  V  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   ++ CGA+F+ ++D  G LFS G PE GQLG  + G+FI RA ++ FD  + P  V +F+ +    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  EL PRLV  L        S + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   18 LLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGGLGGLRVRSVVSGPCAAHSLLISTEGRLWSWGRNEKGQLGHGDTKRVEAPKLIEVLAGEAVVAAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLGCGAEFSMVLDCKGNLFSFGCPEYGQLGHNSDGKFIARAQRIEFDCELLPRRVGIFVERTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQRDELVPRLVK-LFDFPGRGASQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 331          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A8B9Q4J1_APTOW (Regulator of chromosome condensation 2 n=2 Tax=Aves TaxID=8782 RepID=A0A8B9Q4J1_APTOW)

HSP 1 Score: 230 bits (586), Expect = 2.380e-69
Identity = 134/321 (41.74%), Postives = 186/321 (57.94%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   ++R V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   76 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIQVRTVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEVLGGEAIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 389          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A1V4KP93_PATFA (Protein RCC2 n=48 Tax=Aves TaxID=8782 RepID=A0A1V4KP93_PATFA)

HSP 1 Score: 230 bits (587), Expect = 3.380e-69
Identity = 134/321 (41.74%), Postives = 187/321 (58.26%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   ++R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   18 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGGEAIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGATQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 331          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: UPI00115ECEC0 (protein RCC2 n=1 Tax=Manacus vitellinus TaxID=328815 RepID=UPI00115ECEC0)

HSP 1 Score: 230 bits (587), Expect = 3.750e-69
Identity = 134/321 (41.74%), Postives = 187/321 (58.26%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   ++R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   21 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIQVRSVVSGPCAAHSLLITSEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGGESIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVGIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 334          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: A0A7L1DA35_9PASS (RCC2 protein (Fragment) n=9 Tax=Neognathae TaxID=8825 RepID=A0A7L1DA35_9PASS)

HSP 1 Score: 230 bits (586), Expect = 4.520e-69
Identity = 134/321 (41.74%), Postives = 186/321 (57.94%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   ++R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  +    +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        S + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   16 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGAESIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVGIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGASQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 329          
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Match: UPI00051EF13A (LOW QUALITY PROTEIN: protein RCC2 n=1 Tax=Egretta garzetta TaxID=188379 RepID=UPI00051EF13A)

HSP 1 Score: 230 bits (587), Expect = 6.450e-69
Identity = 134/321 (41.74%), Postives = 187/321 (58.26%), Query Frame = 1
Query:    1 VLFCGCTDWDGVGRRPSESFLVAPR-------------CLSFPKRIRAVFSGPTACHCVCIDVDGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALLTNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTCIIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLIKDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGHACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPNSPRGEATM 924
            +L  G T+WD +GR+      VA R             CLS   ++R+V SGP A H + I  +G  +SWGRNE G LGHGDT    AP L+  + G  +  A+CGR+HT  LT  G VF  G  K GQLG G   D+   P Q++ + +   +++CGA+F+ I+D  G L+S G PE GQLG  + G+FI RA ++ +D  + P  V +F+ K    ++L  V +V + D+ACG NHT+ ++    +RV++WGFGGYGRLGHA Q  E+ PRLV  L        + + AG  CS A+S TG LF+WG   N+ R E+TM
Sbjct:   51 LLIFGATNWDLIGRKEVPKQQVAYRNLGQNLWGPHRYGCLS-GIQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGGEAIVLAACGRNHTLALTESGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKLACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-VPNVVVRDVACGANHTLVLDSQ--KRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGAT-NTSR-ESTM 364          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7646.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIX9_ECTSI1.440e-13761.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDF7_9STRA8.300e-9748.09Regulator of chromosome condensation 1/beta-lactam... [more]
A0A093CVQ5_TAUER4.230e-7142.09Protein RCC2 (Fragment) n=1 Tax=Tauraco erythrolop... [more]
A0A7L1IZB9_SMUAF9.800e-7142.37RCC2 protein (Fragment) n=3 Tax=Neognathae TaxID=8... [more]
A0A7K9WF68_9PASS2.810e-7042.19RCC2 protein (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A8B9Q4J1_APTOW2.380e-6941.74Regulator of chromosome condensation 2 n=2 Tax=Ave... [more]
A0A1V4KP93_PATFA3.380e-6941.74Protein RCC2 n=48 Tax=Aves TaxID=8782 RepID=A0A1V4... [more]
UPI00115ECEC03.750e-6941.74protein RCC2 n=1 Tax=Manacus vitellinus TaxID=3288... [more]
A0A7L1DA35_9PASS4.520e-6941.74RCC2 protein (Fragment) n=9 Tax=Neognathae TaxID=8... [more]
UPI00051EF13A6.450e-6941.74LOW QUALITY PROTEIN: protein RCC2 n=1 Tax=Egretta ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7646contigC-tenellus_contig7646:145..6088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LIX9
PFAMsPHD,RCC1
Model size927
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.37e-138
EggNOG OGsCOG5184@1|root,KOG1427@2759|Eukaryota
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-20_001970.1
Descriptionchromosome passenger complex localization to kinetochore
Cds size927
COG categoryDZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7646.1.1prot_C-tenellus_contig7646.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7646 145..6088 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790049.5291562-CDS-C-tenellus_contig7646:144..3031680790049.5291562-CDS-C-tenellus_contig7646:144..303Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 145..303 +
1680790049.5429986-CDS-C-tenellus_contig7646:1715..18661680790049.5429986-CDS-C-tenellus_contig7646:1715..1866Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 1716..1866 +
1680790049.5520215-CDS-C-tenellus_contig7646:2760..28701680790049.5520215-CDS-C-tenellus_contig7646:2760..2870Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 2761..2870 +
1680790049.5645647-CDS-C-tenellus_contig7646:3907..40901680790049.5645647-CDS-C-tenellus_contig7646:3907..4090Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 3908..4090 +
1680790049.5738432-CDS-C-tenellus_contig7646:5375..55031680790049.5738432-CDS-C-tenellus_contig7646:5375..5503Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 5376..5503 +
1680790049.5839775-CDS-C-tenellus_contig7646:5892..60881680790049.5839775-CDS-C-tenellus_contig7646:5892..6088Choristocarpus tenellus KU2346CDSC-tenellus_contig7646 5893..6088 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7646.1.1

>prot_C-tenellus_contig7646.1.1 ID=prot_C-tenellus_contig7646.1.1|Name=mRNA_C-tenellus_contig7646.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=309bp
VLFCGCTDWDGVGRRPSESFLVAPRCLSFPKRIRAVFSGPTACHCVCIDV
DGGAYSWGRNESGALGHGDTATRAAPTLLPDMLGSRVKQASCGRSHTALL
TNEGVVFTMGAGKCGQLGHGRLVDSSLEPKQVVLDSKAFKQVSCGADFTC
IIDETGRLFSCGLPENGQLGLGTTGEFIERAGKVSFDFVVTPTVVNLFLI
KDVKSKLLDEVRSVRLEDIACGRNHTVAVEMAPLRRVWTWGFGGYGRLGH
ACQDAELRPRLVDTLARLSHVEISSVSAGANCSLALSSTGHLFYWGKLPN
SPRGEATM*
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mRNA from alignment at C-tenellus_contig7646:145..6088+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7646.1.1 ID=mRNA_C-tenellus_contig7646.1.1|Name=mRNA_C-tenellus_contig7646.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5944bp|location=Sequence derived from alignment at C-tenellus_contig7646:145..6088+ (Choristocarpus tenellus KU2346)
GTGCTTTTTTGTGGGTGCACAGACTGGGATGGCGTTGGCAGGCGGCCAAG TGAGAGCTTCCTGGTTGCTCCACGTTGTTTATCCTTTCCCAAGAGGATCA GGGCAGTCTTTTCTGGACCAACAGCTTGTCATTGTGTATGCATTGATGTG GATGGAGGGGTGAGTATATATATATATATATATATATATGGATGTATACA TATATATACATTAAGTATGTGTATGTTAAAAAAATATATATATAAATCTG GAGAATGAATGAACGATTAGTTCTGACTGGTTCAATTGTTTTTGATTGAT GTTGAAGGTAGGGGTGAGGGTCATTTTTTATTTATTATTTATTTTTATTT TGGGGGTTATATTGTCTGATGTTGCGATAATGTAGCCTTTTCTTTTTTTT GTGTACTGTTGGAGTGTTCTCCAATCGGTTGATTCGGTTTGTAATTTTTT TTTTCTTCCTGTGTGGGTAGAGTGGTCAGAGTGGTCAGAGTGGTTAGGAT TACTTTTTTATCTCTATATTGTACTGATGATCGTGTCACAGTTAGGGTAA GAGTGAAAGTATCTTAGAGGGTACGAGTTTTGCCCTGTTTGTCCATTTGG GGCTTGGCTTCCCTTGTTTTTTTTTAATGACATTTTCCTTATTCCAAAAT GTTTCGAAGTGTAGGTAGAATGTATACGTTATGAGAAGGTGTTTCTGAGA CATAGAGATATTGACACTTCCTAACAAACACGATAACCAAAATTACATTA AAATCGCAACATTTCTTAGTCGTGGACTGGTGACTCGCTGTGATTGGTCG ATATATGATCGTAACCTCCTTCTATTGGCCGACAGGAGGTATTCGCTCTC TGTGATGATCGCTAGTTCTATTTGAAGGCAAGATGATAGGCGGTGTGAAT GTGAATGCAAAAGGTGGCAGCAGATCTCCTCCGTGAACGACAACAGCATT GTTTTGAGAGCGATTTTTGTTTTTTTTTGTGTGAAAAGAGCACCGACTGA CCGGACTAGACAGAACCTTTTTTTTTGTAACTGCTTGGTGTGGAACCATT AATTTATGGTGTGAAGCCGTGACCCCGTGTGTCAATGCGTTTTTCTTTTG TTGCTTTCCTTTTGTGTGTGTGTGCGTTTTTTTTTTTGTGTGTTTTTTGT GTTTTTTTTAAAACTCAAGGGTTGCATATGACTGAACAGGAGGCACCAAC TCAACGGTTTGATTTTTTAAATTTTATTTTGTAATTTTTTATTCTGATTC TTCAAGAGATGGGAGTCGAAGCTCTTGTATGTGGGTACATCAACACACCT TCCTGTGGAAGTGAAACGTGTTGGAACCAAGCCTAGACCAGACTGAATCG ATTTATTTATATATATATATATATTATTTTTTTAAATATTTTTTTATTGT GAACGAAGAGACTGGAAGCTATCCGTGGTGTTAAACTAGTAATTGTTAAT AATAAAAAAAGAATTATGTAAGATTAGTATGGCGTGTATGTACGTACACA TATTAGTGTCACATTCAAAGAAAGAAATGTAATGTTTTTTTCTATTCAAT TTTTTTTCTCGTGGTTGGAAGGCGTATTCCTGGGGACGGAATGAGAGCGG TGCTCTGGGCCATGGTGACACCGCTACGCGAGCAGCACCGACTCTATTAC CGGACATGTTGGGGTCCAGAGTGAAACAGGCCAGTTGTGGAAGGTCGCAC ACTGCACTCCTCACCAATGAAGGTTAGCACCGATGACGGTTGATGTTCCA AGAAAAAAGTGTATATATATTTTTTGTATGTTGTGGTGTGTGTGTTGTGC TGAGATGTGATGGTGCTCTACTGCTCGAGACCAACGCCTTCTTGGTGAAA CCGGTGGAATCTGTGAGGGTTAGGGTTGGAACATTATTGAATATTTGGTT TGGTTTTGCATTTTTTTGTGTTGTGGGGGGGGGGGGGGGGGGGGTGCACA GTGGTGTGTTTGGCCTGTTTCTTTTTGTACTGGGAGAGGTGTATTCTTGG TATTATTGGAGTGGCTTGTTTATTTTTTTATTTTTGGATGGTAGGAGTGT TGGTGCTTGTGTAAGGGTCAGTGTCAGGGTTAGGGTTAGGGTTAGGGTTA GATTTCCCCCAAGTGGTACTGTGCCGTATCTCTTTTTTTTTTGTGGTGAT TGTGTTTGTTGGGTTAGGGTTAAGGATGTGGGGGTAGAGGTTGAGGTGAG GGTGTAAAGGGGTAAAGGTGATAGGTGTACCAGTCTCGACCCCTGAGGTG ACTCAATTGGTTGTTTTGGGTGTATATGTGTAGTTGTGTGTTGGGTGCAT ATGTGTAGTTCCTTTTAGTTTGTTGTGTGTTGGGTGTATATGTGTAGTTA CTTTTAGTTTGTTGTGTGTTGTGTGTCGAAAGCTACTCATATCTTTTTTT TTATTTGACGTTCAACTATGTAATAACACTACATTGAAACGCAAAAAAAA AGTTGACGTTTTTCTCTTCTTTTTCTTTTAGTAATTCACACACAAAGAAC ACACAGTAGAATCATAGATTCACAGGCACTGCACTGATATGGGGGCTATC CTCCAGTGTTTGTGATTGTGTCGAGCAAGCCTGTGATTTATCTGGAAATA TTTGTGTTTCCTTCAGGTGTTGTGTTCACAATGGGAGCAGGCAAGTGTGG GCAACTGGGTCATGGCCGACTGGTGGATTCGTCCCTTGAACCCAAGCAAG TGGTTTTGGACAGCAAGGCCTTCAAGGTGAGAAGGGGAGTTCTCCACCTG TCGTTGGTGGTTCTCTTGCCTGCAGGATCCGGCCTACTGTGCTTTCCTCA ATGGTATAATGTATTGTATTTGTATTCAAAGTTCAAATCTGAATGACCTG ACTCATGTGTTTGTGTGTTGTGTGTGTGTTTGTGTTGTGTGTGTTGTGTG TGTTGTGTGTGTTTGTGTGTGTGTGTTTGTGTGTGTGTGTTGCTTGCTCT CCCTGCAGACAAGGTGGTAGGTATATTAGTATTGTATTGTGTAGGAACGA AAGAAAATAGCACCTCTGTTTAAAGGTTCTGTTTAAAGGTTCCAGTCTAA TTTCAAGTGATTTGTTCCCCATATGATTTTCTGGCGGATTATTTTTTTTA TAATTAATTTCTTGGATTATTTAAAGGTACAGGTGCTGATTATTTAAAGG TACAGGTGCCGGGGATTTTGTATTATTTTGACTCTCTGATTCCAATGGAT ATTCTTTTTGTTACTGATATTTTGATAGGCTGTTTTTTAACCAGTCTAAT AAATGAAGTATGTTTTTGTATTGTTGTTGGTAGATTATAAAAAATTATAT ATTTCTTAGAGTACCAAGTGTCTCTCTGTCAAGGGAATAATGTGCTTTCC CCCTCCCCCAACCTTGGTGCAGACTGTGGGCTGGCTGGGTCATATGCATG TACCGTGTGATACCGTATCACTTTATATAAAAAAGGATAAAATATAGCTC AATTTAATTTGTACTCTAATGTTATTATTGCTGTGAACAATAATCCGTTT TTCTGATGGCAAATGGACCTTGCCTACAACGTTACACTGACTGTAGAGAT CATTGCAATATAATAATAATAATAATAATAATAATAATAATATTTGTAGT ATGTACCTTTTATTGACTCAACAGATCTTGTGTCAGGGTTAGCATTCTTT TTTTCTTTAGTTAAATATATATATATATATATTGTATGTATTATGTATTA TGTATTATGTATTATGTATTATGTATTATGTATTATGACCCTTTATTCCC CAAACTCACAAAGCAGGTTTCATGTGGTGCGGATTTTACTTGCATCATTG ATGAAACTGGAAGGCTTTTTTCGTGTGGTCTCCCGGAGAACGGTCAGCTG GGGTTGGGTACGACAGGGGAGTTCATAGAGAGGGCAGGGAAAGTTTCCTT TGACTTCGTGGTCACACCCACTGTGGTCAACCTCTTTCTCATTAAGGTGC AGTAGAAATCTACTGGGGGAGAAGAAAGGGGTGGTGGGGGGGGAGGGGCG GAGGTGGGGATTTGGTCTCTTTGTAGGAATTGGAGGGTGCCTTTTTGTTT TTTGAAGGAGGTATGATAACATATCATAATATGATCTTACGAGGTACGAT GACATGATCTGAAGGGTTTTGCGTTTGTTTTGGTGGGTGATGGTAAAATA AAAATACATTTCCAGTGGGTTAGGGGTGGTGGGGTTTTAAAAGGGTAGAT AAAGAAGAAAATCTTTTGGTAGAGAAGTAAGATCTCCTTTTTTTGTTTTT TTTGTTTATGGTCGTTAGGGTTAGGGGTAGTGGATAGTGGCGTGTCTCTT GTTCTGTTCTGTTGTGTGATGTGTTGGAGGTGTTCTGCTTTGATTGCTCC TCCTCTCTTCACAGAAGGTGTGAGTGCTCTGTTGAGTCTGTCCACTACTA GCAATCATTGAAGAACAGAAAGCGAAGAGGTAATATTGAGTGTAACTAAG GGTGTAATGATGTGGGTGTAACTAACTCTAAAGCTGTTCTGTTCTGAATT ATAATAAAAGTTTTTATCTGTTCTGTTCTGTTGGCCTTTTGTTTTGTTCT TGGTCCTGTTTAAAAAAAATATATTTTGAGAGGTTGCATTCCTTAGCATG GTTCAATTCATTAACACAACTTTTTTTATTGTGTAAGTCTTAGAGCCGGT ATGTGCTGTATTGTCCTGTGATGTCAGACAAGATGTAATCTGCATCTCCC CCACTCCCACCCCCTACCCACTCTTAGCCCATTTCTGATACACATATCAC ACAAGAACATCAATCATAATTTGGTGTGAGCTGGAAGTAGCAGCTACTGG GGAGGCGGCATACTCAACATGACCTAGTCACTGGGATTTTTATTATTATT TGGACGGAATTTTTATTATTTATCAAGTATTGTTTTTGATATCATATATA GGCCGAGAGGGAGCAGATGGAGATGTGTGTTATGACTGTGTGTGTGTGTT TTTTTTTTTTGAGGTTTTTGAACCTTTATCTGCAGAAGATGAAGGCGTGA ATAAGGATCGCTTTCTCCTTTTGAAATATAACCTAGGTGTAATGAGATGT AATGAGATGTAACCTCGAAACAGTCAATGAGATGTACATGTACTGCCCCG AAGGTCTGATGGGCCCTTGGAGCTCAGCAGCACTCTCCTCTCGGATTGGT TTGTCTCAAAAGGGAATTGATTGGATTGGTTGAATCGCTCTTTGTTTGTG TGTGTGTGTGTGTGTGTTTGTGTCCTGTCAGGATGTGAAGAGCAAGCTGT TGGATGAGGTGAGGTCGGTACGTCTTGAGGATATTGCCTGTGGAAGGAAC CACACTGTAGCGGTGGAGATGGCTCCATTGCGGAGGGTGTGGACTTGGGG GTTTGGTGGGTGAGTGAGGGGGAGTGGAGTTTGTTGTACAAGCATCAGTT TGGGTTCAGTACTGAGTGGGAGACTCTGGTTGGGAAATGGAGGTGTAGTA TAGTTGATGAGTGAAGAGGTGTGAAGAGGTGTGAAGGGGTGACGAATCTC CTTCGGGATTGCGATCATCTAAGAATCTTAGAATCTTAGATTCGTATGTT CCTTTCCTTTTTTTTTTTTAAGTAGTATAATTTTGCAAAGATATTTATTG AAACTGTTGGGGGTTTTGGTCTGTATTTGATACAATGGCAATTAAAAAAA AAGAAGAAGAGATGGTGCTTTTGAAATGATTTGCTCGTCTCCCTCTTTGG TATTTCTTAAAGTTGTGCTTGTACTTCCATCCTATTTTATCAATGAAGGT ATGGGCGTCTAGGTCATGCCTGCCAGGATGCCGAACTCCGCCCTCGCCTG GTAGACACCCTGGCACGCCTTTCACATGTGGAAATTTCTTCTGTGTCTGC TGGGGCAAACTGTTCCTTGGCTCTGTCAAGCACTGGTCATCTCTTTTACT GGGGTAAGCTGCCCAATTCACCCAGGGGAGAGGCTACCATGTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig7646:145..6088+

>mRNA_C-tenellus_contig7646.1.1 ID=mRNA_C-tenellus_contig7646.1.1|Name=mRNA_C-tenellus_contig7646.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=927bp|location=Sequence derived from alignment at C-tenellus_contig7646:145..6088+ (Choristocarpus tenellus KU2346)
GTGCTTTTTTGTGGGTGCACAGACTGGGATGGCGTTGGCAGGCGGCCAAG
TGAGAGCTTCCTGGTTGCTCCACGTTGTTTATCCTTTCCCAAGAGGATCA
GGGCAGTCTTTTCTGGACCAACAGCTTGTCATTGTGTATGCATTGATGTG
GATGGAGGGGCGTATTCCTGGGGACGGAATGAGAGCGGTGCTCTGGGCCA
TGGTGACACCGCTACGCGAGCAGCACCGACTCTATTACCGGACATGTTGG
GGTCCAGAGTGAAACAGGCCAGTTGTGGAAGGTCGCACACTGCACTCCTC
ACCAATGAAGGTGTTGTGTTCACAATGGGAGCAGGCAAGTGTGGGCAACT
GGGTCATGGCCGACTGGTGGATTCGTCCCTTGAACCCAAGCAAGTGGTTT
TGGACAGCAAGGCCTTCAAGCAGGTTTCATGTGGTGCGGATTTTACTTGC
ATCATTGATGAAACTGGAAGGCTTTTTTCGTGTGGTCTCCCGGAGAACGG
TCAGCTGGGGTTGGGTACGACAGGGGAGTTCATAGAGAGGGCAGGGAAAG
TTTCCTTTGACTTCGTGGTCACACCCACTGTGGTCAACCTCTTTCTCATT
AAGGATGTGAAGAGCAAGCTGTTGGATGAGGTGAGGTCGGTACGTCTTGA
GGATATTGCCTGTGGAAGGAACCACACTGTAGCGGTGGAGATGGCTCCAT
TGCGGAGGGTGTGGACTTGGGGGTTTGGTGGGTATGGGCGTCTAGGTCAT
GCCTGCCAGGATGCCGAACTCCGCCCTCGCCTGGTAGACACCCTGGCACG
CCTTTCACATGTGGAAATTTCTTCTGTGTCTGCTGGGGCAAACTGTTCCT
TGGCTCTGTCAAGCACTGGTCATCTCTTTTACTGGGGTAAGCTGCCCAAT
TCACCCAGGGGAGAGGCTACCATGTGA
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