mRNA_C-tenellus_contig7634.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A6H5JTY8_9PHAE (CP-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTY8_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.060e-27 Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAELVR 261 MVKKKGKS RTSL+QKYKIKKRVAEHHRKQKK +++NP RKVKDPGIPNS+PFKEEVLAEI AK+R+E KV KEKRRAE+++ Sbjct: 1 MVKKKGKSGRTSLKQKYKIKKRVAEHHRKQKKGAKKNPTTGRKVKDPGIPNSLPFKEEVLAEIAFAKKRVEDRKVLAKEKRRAEMMK 87
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A836CE27_9STRA (Nug1, nuclear ribosome-associated GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE27_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.840e-20 Identity = 55/87 (63.22%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAELVR 261 MVKKKGKS RT+L+QKYKI ++V EH R+Q+K++++NP ++K KDPGIPNS+PFK EVLAEIE+AK+R E +K A K+KR+ EL R Sbjct: 1 MVKKKGKSGRTTLKQKYKIDRKVKEHKRQQRKDAKKNPHLHKK-KDPGIPNSIPFKAEVLAEIEYAKKRAEEHKQAQKDKRKLELAR 86
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A162U0T6_PHYB8 (GN3L_Grn1 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162U0T6_PHYB8) HSP 1 Score: 76.6 bits (187), Expect = 4.240e-16 Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEA 216 MV KK +SKR +YKI KRV EHHRK+KK +++NPK+NR KDPGIPNS PFKEE+L EIE AK+ EA Sbjct: 1 MVAKKPQSKRIKAAHRYKIIKRVKEHHRKEKKLAKKNPKSNRTKKDPGIPNSWPFKEELLNEIEQAKQEAEA 72
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A1X2INY3_9FUNG (GNL3L/Grn1 putative GTPase-domain-containing protein n=2 Tax=Absidia repens TaxID=90262 RepID=A0A1X2INY3_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 6.580e-16 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAELVRD 264 MV KK KSKR + ++ YKI+KRV EHHRK +KE ++NP+ RK KDPGIPN+ PFKEE+L E+E K+ LE K + R A+ +D Sbjct: 1 MVPKKYKSKRGTAREYYKIEKRVREHHRKLRKEQKKNPQLRRKPKDPGIPNNWPFKEELLNEVERHKQDLEEEKKKQRAARLAQSEKD 88
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A163K2Z5_ABSGL (GN3L_Grn1 domain-containing protein n=2 Tax=Absidia glauca TaxID=4829 RepID=A0A163K2Z5_ABSGL) HSP 1 Score: 74.7 bits (182), Expect = 1.870e-15 Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAELV 258 MV KK KSKR + ++KYKI+KRV EHHR +KE ++NP RK KDPGIPN+ PFKEE+L E+E K+ LE K K++R A L+ Sbjct: 1 MVAKKYKSKRGTAREKYKIEKRVREHHRNLRKEQKKNPHLRRKPKDPGIPNNWPFKEELLNEVERHKQDLEEEK---KKQRAARLL 83
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A448YUI6_9STRA (CP-type G domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUI6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 5.740e-15 Identity = 48/90 (53.33%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPK-----ANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAEL 255 MVKKKGKSKRT+L+ KYKI++RVAE HRK+KK+++R+ K N++ +DPGIPNS PFK+++L +I A+ R + + AMK+KR+ L Sbjct: 1 MVKKKGKSKRTTLKDKYKIQRRVAETHRKRKKQAKRDEKNGVVRPNKQKRDPGIPNSWPFKQDLLKDIARARERQQEQQQAMKDKRKGXL 90
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A7S3NJI4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJI4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.960e-14 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPK---ANRKVKDPGIPNSMPFKEEVLAEIEHAK 201 MVKKKGKSKRT+L+QK+K++KRV EHHRKQKKE++R + ++K +DPGIPNS PFK E+LA++E AK Sbjct: 13 MVKKKGKSKRTTLKQKFKVQKRVKEHHRKQKKEAKRKGQQVGTSKKKRDPGIPNSWPFKAELLAQLEAAK 82
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: A0A8H7BH45_9FUNG (GN3L_Grn1 domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BH45_9FUNG) HSP 1 Score: 70.9 bits (172), Expect = 4.610e-14 Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLE 213 MV KK KSKR +YKI+K+V EHH+KQKK +++NP+ R KDPGIPNS PFKEE+L EIE K+ +E Sbjct: 1 MVAKKPKSKRVKAAHRYKIEKKVKEHHKKQKKLAKKNPQKKRAHKDPGIPNSWPFKEELLNEIERHKQEVE 71
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: UPI001CF4B5E5 (guanine nucleotide-binding protein-like 3 homolog n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF4B5E5) HSP 1 Score: 75.9 bits (185), Expect = 5.150e-14 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKE 237 MV+ K +SKR + ++KYKI K+V EHHRKQ+KE++RN KA R KDPGIPN PFKEE+L + E KRRLE K KE Sbjct: 1 MVRPKKQSKRMTCRKKYKIAKKVREHHRKQRKEAKRNGKAKRLKKDPGIPNLCPFKEELLKQAEEKKRRLEEAKERRKE 79
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Match: B8C5H8_THAPS (CP-type G domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5H8_THAPS) HSP 1 Score: 75.5 bits (184), Expect = 6.920e-14 Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 1 MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKA-----NRKVKDPGIPNSMPFKEEVLAEIEHAKRRLEANKVAMKEKRRAELVRD 264 MVKKKGKSKR +L+ KYKI++RV E HRK +K+++R+ A ++K KDPGIPNS PFK+E+L +I ++ R+E K+ KE RRA+L +D Sbjct: 1 MVKKKGKSKRITLKDKYKIQRRVVETHRKNRKQAKRDSAAGVVKHDKKKKDPGIPNSWPFKQELLQDIRNSNERMEQRKLEEKE-RRAQLKKD 92 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7634.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7634.2.1 >prot_C-tenellus_contig7634.2.1 ID=prot_C-tenellus_contig7634.2.1|Name=mRNA_C-tenellus_contig7634.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=95bp MVKKKGKSKRTSLQQKYKIKKRVAEHHRKQKKESRRNPKANRKVKDPGIPback to top mRNA from alignment at C-tenellus_contig7634:2677..4009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7634.2.1 ID=mRNA_C-tenellus_contig7634.2.1|Name=mRNA_C-tenellus_contig7634.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1333bp|location=Sequence derived from alignment at C-tenellus_contig7634:2677..4009- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7634:2677..4009- >mRNA_C-tenellus_contig7634.2.1 ID=mRNA_C-tenellus_contig7634.2.1|Name=mRNA_C-tenellus_contig7634.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=285bp|location=Sequence derived from alignment at C-tenellus_contig7634:2677..4009- (Choristocarpus tenellus KU2346)back to top |