mRNA_C-tenellus_contig7617.1.2 (mRNA) Choristocarpus tenellus KU2346
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Overview
Homology
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI) HSP 1 Score: 453 bits (1165), Expect = 3.370e-146 Identity = 233/437 (53.32%), Postives = 317/437 (72.54%), Query Frame = 2
Query: 266 DSENLRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPKRRRPTKENEEEEDK---GVLWVSLSDNRLRARILSSSERDYLGTYCRSVNKFITITTMTVIRDAMNPLPMDFLDEGITLSEEERHTFYARKAVLLGCVAIGAVYCGDDEAGSIYMDQAHMYLKDCFDALLPEVVSCYLVMVLFHLHCLDRPKVFRYIGFAQQAFKEMSPSQQ-DGAGEVSDSVMMLSTFLHVACDSDIRVEEIEVDGGDLKVVCARSISSRMLSIFSYVLLALFRRTDAAGAAKAPLKAMPLPSLVTLGSMMEESHQLLEMMENPGALSIIVIKTLRGYFLLMNTGTDKKVMEEVAMPVSKALESDQGVLHFPLCWHMCSCISAFLKRMNQSTAAEAMDTHMEPLRPNLSFAGCCCSVALDIFSVYAGDSNISRMPNNGLF 1564
D NLRTTCD CT K+KCDGG PCKRC RR S CVYREK+RCGPKRR+ + ++ ++D G L + R+L+S E+++L + SVNKFI +T +TVIRDAMNPLP+D + G+ SE E +T++ARKAVLLGCVA+GAV+CGD + YM +A ++LKDCFDAL+PEVVSCYLVMV++HLH LDR KV+RYIGFAQQA++E++ S + G V DS+ +LSTFLHV C+ +IR +++ + G S+S R++++FS+VLL L+R+TD AA+A + P+P++ TLG+M E+ LL MME+PG+ ++IVIKTL+GYFLLM G ++ V++ VAMPV+KALE+D VL+FPLCW MC C+S+FL+R + A +MD M+PLR L++A CC VAL++ VYAG I+ P NGLF
Sbjct: 49 DENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSFAGHLGEGGAGVRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVP-GLAASEAEENTYHARKAVLLGCVAVGAVFCGDQSSAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLVVGGHVRDSLRVLSTFLHVTCNKEIRPQKVHLRGETNPEPGGGSLS-RIIALFSHVLLQLYRKTDRVEAARASPQ-QPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMK-GKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMCQCVSSFLRRKGCHSVAASMDAIMQPLRMTLAYANACCGVALNVVGVYAG-KGITVTPVNGLF 480
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE) HSP 1 Score: 451 bits (1161), Expect = 1.220e-142 Identity = 238/442 (53.85%), Postives = 320/442 (72.40%), Query Frame = 2
Query: 266 DSENLRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPKRRRPTKENEEEEDK---GVLWVSLSDNRLRARILSSSERDYLGTYCRSVNKFITITTMTVIRDAMNPLPMDFLDEGITLSEEERHTFYARKAVLLGCVAIGAVYCGDDEAGSIYMDQAHMYLKDCFDALLPEVVSCYLVMVLFHLHCLDRPKVFRYIGFAQQAFKEMSPSQQDGAGE-VSDSVMMLSTFLHVACDSDIRVEEIEVDGGDLKVVCARSISSRMLSIFSYVLLALFRRTDAAGAAKA-PLKAMPLPSLVTLGSMMEESHQLLEMMENPGALSIIVIKTLRGYFLLMNTGTDKKVMEEVAMPVSKALESDQGVLHFPLCW----HMCSCISAFLKRMNQSTAAEAMDTHMEPLRPNLSFAGCCCSVALDIFSVYAGDSNISRMPNNGLF 1564
D NLRTTCD CT K+KCDGG PCKRC RR S CVYREK+RCGPKRR+ + ++ ++D G L + R+L+S E+++L + SVNKFI +T +TVIRDAMNPLP+D + G+ SE E +T++ARKAVLLGCVA+GAV+CGD + YM +A ++LKDCFDAL+PEVVSCYLVMV++HLH LDR KV+RYIGFAQQ ++E++ S + G GE V DS+ +LSTFLHV C+++IR EE+++ S+S R++++FS+VLL L+R+TD AA+A P K P+P+L TLG+M E+ LL MME+PG+ ++IVIKTL+GYFLLM G ++ V++ VAMPV+KALE+D VL+FPLCW H C C+S+FL+R + A +MD M+PLR L++A CC VAL++ VYAG I+ P NGLF
Sbjct: 175 DENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGNFAGHLGEGGGGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVP-GLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQTYRELAQSNKLGVGEYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLS-RIIALFSHVLLQLYRKTDRVEAARASPQK--PVPTLATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMK-GKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMWVHACQCVSSFLRRKGCHSVAASMDAIMQPLRLTLAYANACCGVALNVVGVYAG-KGITVTPVNGLF 610
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI) HSP 1 Score: 390 bits (1002), Expect = 3.510e-125 Identity = 202/374 (54.01%), Postives = 276/374 (73.80%), Query Frame = 2
Query: 266 DSENLRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPKRRRPTKENEEEEDK---GVLWVSLSDNRLRARILSSSERDYLGTYCRSVNKFITITTMTVIRDAMNPLPMDFLDEGITLSEEERHTFYARKAVLLGCVAIGAVYCGDDEAGSIYMDQAHMYLKDCFDALLPEVVSCYLVMVLFHLHCLDRPKVFRYIGFAQQAFKEMSPSQQDGAG-EVSDSVMMLSTFLHVACDSDIRVEEIEVDGGDLKVVCARSISSRMLSIFSYVLLALFRRTDAAGAAKAPLKAMPLPSLVTLGSMMEESHQLLEMMENPGALSIIVIKTLRGYFLLMNTGTDKKVMEEVAMPVSKALESDQGVLHFPLCWHM 1375
D N RTTCD CT K+KCDGG PC+RC RR S CVYREK+RCGPKRR+ + ++ ++D G + L + R+L+S E+++L + SVNKFI +T +TVIRDAMNPLP+D + G+ SE E +T++ARKAVLLGCVA+GAV+ GD + YM +A ++LKDCFDAL+PEVV+CYLVMV++HLH LDR KV+RYIGFAQQA +E++ S + G G V DS+ +LSTFLHV C+ +IR EE+++ G S+S R++++FS+VLL L+R+TD AA+A + P+P++ TLG+M E+ LL MME+PG+ ++IVIKTL+GYFLLM G ++ V++ VAMPV+KALE+D VL+FPLCW M
Sbjct: 51 DENNFRTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGNHVGSVAGHLGEGGAGFRVLTSREQEFLAKFYSSVNKFIPLTCVTVIRDAMNPLPLDVVP-GLAASEAEENTYHARKAVLLGCVAVGAVFSGDQASAGAYMSRAQIHLKDCFDALIPEVVNCYLVMVVYHLHFLDRSKVYRYIGFAQQACRELAQSNKLGVGGHVRDSLRVLSTFLHVTCNKEIRPEEVDLRGETNPEPGGGSLS-RIIALFSHVLLQLYRKTDRVEAARASPQ-QPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMK-GKEQAVLDAVAMPVAKALEADPAVLNFPLCWTM 420
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.450e-49 Identity = 151/529 (28.54%), Postives = 229/529 (43.29%), Query Frame = 2
Query: 275 NLRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPKR-------------------------RRPTKENEEEEDKGVLWVSLS------------------------------DNRLRARILSSSERDYLGTYCRSVNKFITITTMTVIRDAMNPLPM---DFLDEGITLSEE-ERHTFYARKAVLLGCVAIGAVYCGDDEAGSIYMDQAHMYLKDCFDALLPEVVSCYLVMVLFHLHCLDRPKVFRYIGFAQQAFKEMSPSQQDGAGEVSDSVMMLSTFLHVACDSDIRVEEI-----------------------------------------EVDGGDLKVVCARSISSRMLSIFSYVLLALFR--RTDAAGAAK-APLKAMPLPSLVTLGSMMEESHQLLEMMENPGALSIIVIKTLRGYFLLMNTGTDKK-VMEEVAMPVSKALESDQGVLHFPLCWHMCSCISAFLKRMNQSTAAEAMDTH-------------MEPLRPNLSFAGCCCSVALDIF 1510
NLRTTCDGCT SKV+C+G +PC RC RR CVY EKRR P RRP+ E+ G V++S A +LS+ E+ +L + ++N F+ + + +R+AM P P+ L G T E E F+A KAVLLG VA+GA+YC +L+DCFDA++PE +CYL++VL+H+H LD ++FRY+GFAQQ+F E+S Q E+S ++ +LS LHV+CDS I ++ + + GG + +SR+L+I + L+ + R + G ++ A L+A+ + ++ + P L+I+ +K + GYF L G K ++ +VA P A+ +L+FP+ WH+ C+ L + +T MEP L FA CC A I+
Sbjct: 82 NLRTTCDGCTVSKVRCNGKKPCARCERRNEECVYSEKRRQKPAGAPRVPVVVTVPPIGAVGGESTKYADRRPSSED------GAPAVTVSAPYPSVHINGAAHGQIPAVAGTPSPQTVPSQQSAAAVVLSADEQRFLSAFLSTINSFMRVASAATLREAMLPAPLLDVTALAMGQTAPREREISRFHACKAVLLGSVALGAMYCXXXXXXXXXXXXXRAHLRDCFDAVIPETAACYLLLVLYHVHVLDSARMFRYMGFAQQSFAELSLQVQAANCEISAAIALLSALLHVSCDSAISLDPVADAASAFPRGKQRSASAGGPCGAGXXXXXLGAACSGGACXXKGGGGSTLDDYSTGSNSRVLTILARALVHIDNTSRGETDGQSEEAMLEALCEADQLVSRALARSQTGAPDAPPPPSDLAILAVKVMAGYFRLQTGGLSKADMLSQVAAPCLDAVRRTPMLLNFPMGWHLARCVRTMLMQHGDATELXXXXXXXXXXXXXXXXQAIMEPYEARLPFANKCCQSARVIY 604
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: A0A836CK64_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK64_9STRA) HSP 1 Score: 193 bits (491), Expect = 4.550e-49 Identity = 129/426 (30.28%), Postives = 224/426 (52.58%), Query Frame = 2
Query: 272 ENLRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPKRRRPTKENEEEEDKGVLW------VSLSDNRLRARILSSSERDYLGTYCRSVNKFITITTMTVIRDAMNPLPMDFLDEGITLSEEERHTFYARKAVLLGCVAIGAVYCGDDEAGSIYMDQAHMYLKDCFDALLPEVVSCYLVMVLFHLHCLDRPKVFRYIGFAQQAFKEMSPSQQDGAGEVSDSVMMLSTFLHVACDSDIRVEEIEVDGGDLKVVCARSISS-RMLSIFSYVLLALFRRTDAAGAAKAPLKAMPLPSLVTLGSMMEESHQLLEMMENPGALSIIVIKTLRGYFLLMNTGTDKKVMEEVAMPVSKALESDQGVLHFPLCWHMCSCISAFLKRMNQSTAAEAMDTHMEPLRPNLSFAGCCCSVALDIFSVYAGD 1528
EN+R+ CD CT SK++C GG+PC+RC +R EKRRCGPK++ + G V+ + A L+++E+++L + +N ++ + ++ A+ PLP + E +RH +A +A L G V++GA+ C ++ G+ Y +A + LK+CFDA + E+ S +LV+ +++LH LD K+ RY GFA+Q+ +E++ D ++ SV ML L++A + E+ V + S++ R L I S+++++++ T + P +P+ S L S+ E L+E + P +S+++ L+GY LL T + ++ V++ + + +L FPL W M C+ L+R + AE + M PL L FA CCSV ++ +VYAG+
Sbjct: 61 ENMRSACDSCTFSKIRCVGGRPCERCRKRGKD----EKRRCGPKKKEDGSSSPSRSGGGSFSRPGEYSVNHVPSTFDATSLNAAEKEWLRQFVLGLNAYLPVVNEGMLTLAVRPLPSGAV-------EIDRHRRHACRAALWGSVSLGALVCKNEAEGARYNQRARLELKECFDAPVTELTSVFLVLTIYYLHRLDNAKLVRYAGFARQSLRELAFIPLD----IAASVRMLQVSLYLAGAGE--PPEVTVPTPRTMLHLPPSVAKQRCLHIISFLMMSIY--TSIRPDDQRPFGTVPIVSDEHLLSLAGEIRGLVECTKAPDDMSVVIGCVLQGYLLLRLGHTADAI--RISETVAEMVAMNPTILQFPLTWTMSCCVLEGLRRFGRHAVAEKLIATMSPLAAGLPFASKCCSVGAELLAVYAGN 465
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 1.450e-5 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 2
Query: 278 LRTTCDGCTASKVKCDGGQPCKRCARRRSPCVYREKRRCGPK 403
LR +CD C +SK +CDG PC RC RR+ PC Y E+++CGP+
Sbjct: 48 LRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPR 89 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7617.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7617.1.2 >prot_C-tenellus_contig7617.1.2 ID=prot_C-tenellus_contig7617.1.2|Name=mRNA_C-tenellus_contig7617.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=721bp MVSPSNWTSFPQVSNPESSEEDQPDSENLRTTCDGCTASKVKCDGGQPCKback to top mRNA from alignment at C-tenellus_contig7617:887..5619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7617.1.2 ID=mRNA_C-tenellus_contig7617.1.2|Name=mRNA_C-tenellus_contig7617.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4733bp|location=Sequence derived from alignment at C-tenellus_contig7617:887..5619+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7617:887..5619+ >mRNA_C-tenellus_contig7617.1.2 ID=mRNA_C-tenellus_contig7617.1.2|Name=mRNA_C-tenellus_contig7617.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=2163bp|location=Sequence derived from alignment at C-tenellus_contig7617:887..5619+ (Choristocarpus tenellus KU2346)back to top |