mRNA_C-tenellus_contig7615.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S2V2B3_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B3_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.470e-28 Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 DLP +V+QAV+AIIAHQGAA +V+QW D+D+ VSKYA +L QL GK++S DP+TW CEESGM+ENLWLNLSTG Sbjct: 36 DLPELVLQAVEAIIAHQGAATMDQVDQWTMDEDVPVSKYAENLVQLDN--GKKISPDPATWACEESGMKENLWLNLSTG 112
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A836CMU5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU5_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.010e-25 Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 7 LPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 LPT+V QA DA+I HQGAAEQAEV W A+ ++ VSKYA +LP E +G R+SNDPS+W+C +SG+ ENLWLNLSTG Sbjct: 161 LPTLVCQAADAVITHQGAAEQAEVASWEAEQELPVSKYAENLPV--EDNGVRISNDPSSWKCADSGVTENLWLNLSTG 236
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S1SZS2_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZS2_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 1.630e-21 Identity = 45/79 (56.96%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 DLP VV+QA++A++AH+ A +Q EV+ W +++ +VSKYA L QLP A+GK + +DPS W+C+ESG ENLWLNLSTG Sbjct: 134 DLPEVVLQAINAVVAHEAAGKQEEVSVW--EEERAVSKYAESLEQLP-ANGKVIPSDPSQWKCDESGATENLWLNLSTG 209
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S0N978_9CHLO (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N978_9CHLO) HSP 1 Score: 93.6 bits (231), Expect = 1.710e-20 Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 DLP +VIQAVDA+I H G Q EV W + ++VSKYA DL QL GK++ +PS W CEESGM+ENLWLNLSTG Sbjct: 133 DLPELVIQAVDAVIKHAGTMAQEEVAAWQ-EGPLTVSKYAKDLVQLDN--GKKIPPNPSDWACEESGMKENLWLNLSTG 208
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7R9Y9N6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9N6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.660e-20 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 1 QDLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 Q++P +V+ +I HQG ++Q ++ QWV D+++ SKYA L QL G ++S+DPSTW+CE+SGM ENLWLNLSTG Sbjct: 143 QEIPEMVVVVARQVIEHQGYSDQQDLAQWVDDEELKESKYAEALEQLDN--GVKISSDPSTWKCEDSGMTENLWLNLSTG 220
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A061QQZ9_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQZ9_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 3.240e-19 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 +LP VV+Q++ A+IAH A +Q E W ++D VSKYA DL QLP GK + +DP+ W+C+E+G+ ENLWLNLSTG Sbjct: 134 ELPEVVLQSISAVIAHDAAGKQEETAVW--EEDRPVSKYAKDLEQLPTG-GKVIPSDPAQWKCDETGVTENLWLNLSTG 209
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S3F788_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F788_9VIRI) HSP 1 Score: 87.8 bits (216), Expect = 1.060e-18 Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 +LP VIQA + ++A GA +A V+ +VAD+ VSKYA L QL G ++S DPSTW+C ESGM+ENLWLNLSTG Sbjct: 158 ELPEKVIQACNGVLAASGAEREAAVDAFVADEVRKVSKYADGLEQLDN--GIKISPDPSTWECAESGMKENLWLNLSTG 234
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S1RW26_ALECA (Ubiquitinyl hydrolase 1 n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RW26_ALECA) HSP 1 Score: 88.2 bits (217), Expect = 1.450e-18 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 DLP +V QAVDA+IAHQGA QW A+ ++S SKY ++ QLP K++S P W+CE+SG +NLWLNLS G Sbjct: 23 DLPMIVTQAVDAVIAHQGAKSMDSSKQWEAEQELSESKYYKEIVQLPAT--KKISPHPKDWKCEKSGDTQNLWLNLSDG 99
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A7S2C5P8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5P8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.100e-18 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 4 DLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 D P +V QA +A+ AHQ A + EVN V D++ VSKYAA+L QL G +V D S W+CEESGM ENLWLNLSTG Sbjct: 126 DTPMMVAQAAEAVAAHQSAGDVNEVNAIVEDEERPVSKYAANLVQLDN--GVKVPADSSLWKCEESGMTENLWLNLSTG 202
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Match: A0A2V3IW46_9FLOR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW46_9FLOR) HSP 1 Score: 87.4 bits (215), Expect = 2.870e-18 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 1 QDLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEASGKRVSNDPSTWQCEESGMRENLWLNLSTG 240 + LP+++ A+DA++ H G A+V ++D SKYA DLPQ+ G ++S DP WQCEESGM ENLWLNLSTG Sbjct: 130 EQLPSIITMAIDAVLKHDGVERAAQVAAAWEEEDRKESKYARDLPQIDN--GIKISPDPRQWQCEESGMTENLWLNLSTG 207 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7615.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7615.1.1 >prot_C-tenellus_contig7615.1.1 ID=prot_C-tenellus_contig7615.1.1|Name=mRNA_C-tenellus_contig7615.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=83bp QDLPTVVIQAVDAIIAHQGAAEQAEVNQWVADDDISVSKYAADLPQLPEAback to top mRNA from alignment at C-tenellus_contig7615:5329..6436+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7615.1.1 ID=mRNA_C-tenellus_contig7615.1.1|Name=mRNA_C-tenellus_contig7615.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1108bp|location=Sequence derived from alignment at C-tenellus_contig7615:5329..6436+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7615:5329..6436+ >mRNA_C-tenellus_contig7615.1.1 ID=mRNA_C-tenellus_contig7615.1.1|Name=mRNA_C-tenellus_contig7615.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=249bp|location=Sequence derived from alignment at C-tenellus_contig7615:5329..6436+ (Choristocarpus tenellus KU2346)back to top |