mRNA_C-tenellus_contig760.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig760.2.1
Unique NamemRNA_C-tenellus_contig760.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: A0A6H5JFY4_9PHAE (zf-C2HC5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY4_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 4.780e-47
Identity = 118/272 (43.38%), Postives = 156/272 (57.35%), Query Frame = 3
Query:  552 PPQKWSGVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNS-----YAGSANDQPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTYNWLSREERERAEANEVARKEEQLARR---RKVTVSFDIMGRKVVE------------------ADNEETPQSSGEAVT----------------------TLGEQRDAQLQGSGDNSPESRAGENKQSSLPDRPSLHNSGLQGRAKEVYDIMRANLDKRQR 1223
            P  +WSGVTC CM   H ++TNCT CGKIAC  EGG+ CSFC   LP TGREP +  S      AG+A   P SAAL +A+ RK++LLLFDRTS +RTRVLDDQGD+F+++NWLS+ ERE+ EA E AR+++  +RR   R+V +S DIMGR+V+E                  AD + + ++ G ++                          E+ D    G+G+                 R SL N+GL+GRAKEVYD+MRANLDK+ R
Sbjct:  228 PVPEWSGVTCLCMGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSATSGGVDGAAGAA--APHSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKARRDDAASRRGARRQVKMSIDIMGRRVIETHPGEDGGLADGGGGEXXADEDASRKTQGVSLDFGSXXXXXXXXXXXXXXXXXXXXXAEEADTPGAGNGNQ----------------RLSLENTGLRGRAKEVYDVMRANLDKKSR 481          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: D7FU14_ECTSI (Similar to thyroid hormone receptor interactor 4 isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU14_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.170e-45
Identity = 113/246 (45.93%), Postives = 150/246 (60.98%), Query Frame = 3
Query:  588 MAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREP--TATNSYAGSAN-DQPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTYNWLSREERERAEANEVARKEEQLARR---RKVTVSFDIMGRKVVE-----------------ADNEETPQSSGEAVT----------TLGEQRDAQLQGS-GDNSPESRAGENKQSSLPDRPSLHNSGLQGRAKEVYDIMRANLDKRQR 1223
            M   H ++TNCT CGKIAC  EGG+ CSFC   LP TGREP   A+    G+A    PQSAAL +A+ RK++LLLFDRTS +RTRVLDDQGD+F+++NWLS+ ERE+ EA E  R+++  +RR   R+V +S DIMGR+V+E                 AD++ + ++ G ++             G        GS G+ +  S AG   Q     R SL N+GL+GRAKEVYD+MRANLDK+ R
Sbjct:    1 MGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSAASGGVDGAAGATAPQSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKVRRDDAASRRGARRQVKMSIDIMGRRVIETQDPGEGRADGGGGEGEADDDASKKTQGVSLDFGSSSAAGGGAAGSSAXXXXXGSIGEEAGTSGAGNGNQ-----RLSLENTGLRGRAKEVYDVMRANLDKKSR 241          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: A0A2I0XBL4_9ASPA (zf-C2HC5 domain-containing protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XBL4_9ASPA)

HSP 1 Score: 103 bits (257), Expect = 2.150e-20
Identity = 68/167 (40.72%), Postives = 98/167 (58.68%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSANDQ-PQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVVEADNEETPQSSGEAVTTLGEQRD 1061
            G  C+C A RH L++NC +CGKI CE EG   CSFC + +   G      ++YAG  N   P S + A A A  ++L+ +DR S ART+V+DDQ D++     NWLS EE+E  +  +   +E + ARR KV V+FD++GRKVV   +E +   S   +    E+R+
Sbjct:  163 GKPCSCQARRHQLVSNCLSCGKIVCEQEGEGPCSFCGALVLREG------STYAGLENFSIPTSDSEATAEAYAKRLVEYDRNSAARTKVIDDQSDYYEVEGNNWLSTEEKELLKKQQKEIEEAEEARRGKVIVTFDLVGRKVVLNKDEASEMESQYRILRPAEERE 323          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: A0A6A1UG91_9ROSI (Activating signal cointegrator 1 n=2 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UG91_9ROSI)

HSP 1 Score: 103 bits (257), Expect = 3.700e-20
Identity = 64/144 (44.44%), Postives = 89/144 (61.81%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAG-SANDQPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVV 992
            G  C+C A RH L++NC +CGKI CE EG   CSFC + +   G      ++YAG      PQS A A A A  ++LL +DR S ART V+DDQ D++     +WLS+EE+E     +   +E +LA+R KV V+FD++GRKV+
Sbjct:  232 GKPCSCQARRHKLVSNCLSCGKIVCEQEGEGPCSFCGALVLREG------STYAGLDVILPPQSDAEAAAEAYAKRLLEYDRDSAARTTVIDDQSDYYEIEGNSWLSKEEKELLRKKQEEIEEAELAKRNKVVVTFDLLGRKVL 369          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: A0A2G5F3U0_AQUCA (zf-C2HC5 domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5F3U0_AQUCA)

HSP 1 Score: 99.8 bits (247), Expect = 1.260e-19
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSANDQ-PQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFS--TYNWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVVEAD 1001
            G  C+C A RH L++NC +CGKI CE EG   C+FC + +   G      ++YAG      P S A A A A  ++L+ +DR S ART V+DDQ D++     +WLS EE+E  +  +   +E   ARR KV V+FD++GRKVV +D
Sbjct:  165 GQPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCNFCGALVLKEG------STYAGLDETAIPLSVAEAAAEAFSKRLVEYDRNSAARTTVIDDQSDYYEIDANSWLSTEEKELLKKKQKETEEADQARRSKVIVTFDLVGRKVVFSD 305          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: UPI0009F2EBB9 (activating signal cointegrator 1 isoform X2 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F2EBB9)

HSP 1 Score: 100 bits (248), Expect = 1.470e-19
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSANDQ-PQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRK 986
            G  C+C A RH L++NC +CGKI CE EG   CSFC + +   G      ++YAG  N   P S + A A A  ++L+ +DR S ART+V+DDQ D++     NWLS EE+E  +  +   +E + ARR KV V+FD++GRK
Sbjct:  163 GKPCSCQARRHQLVSNCLSCGKIVCEQEGEGPCSFCGALVLREG------STYAGLENFSIPTSDSEATAEAYAKRLVEYDRNSAARTKVIDDQSDYYEVEGNNWLSTEEKELLKKQQKEIEEAEEARRGKVIVTFDLVGRK 298          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: UPI0009E32E0D (activating signal cointegrator 1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E32E0D)

HSP 1 Score: 100 bits (250), Expect = 1.800e-19
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSANDQ-PQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVV 992
            G  CTC A RH L++NC +CGKI CE EG   CSFC + +   G      ++YAG  N   P S   A A A  ++L+ +DR S ART+V+DDQ D++     +WLS +E+E  +  +   +E + ARR KV V+FD++GRKV+
Sbjct:  163 GKPCTCQARRHQLVSNCLSCGKIVCEQEGEGPCSFCGALVLREG------STYAGLENFSIPISETEATAEAYAKRLVEYDRNSAARTKVIDDQSDYYEIEGNSWLSAQEKELLKKKQKETEEAEEARRGKVIVTFDLVGRKVI 300          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: B9GZD7_POPTR (zf-C2HC5 domain-containing protein n=2 Tax=Populus trichocarpa TaxID=3694 RepID=B9GZD7_POPTR)

HSP 1 Score: 95.1 bits (235), Expect = 2.180e-19
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAG-SANDQPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKV 989
            G  C C A +H L++NC +CGKI CE EG   CSFC + +   G      ++Y G   +  P S A   A A  ++L+ +DR S ART V+DDQ D++     NWLS EE++     +   +E +LA+R KV V+FD++GRKV
Sbjct:   20 GKPCPCQARQHRLMSNCLSCGKIVCEQEGEGPCSFCGALVLKEG------STYDGLEESTAPTSDAKFAAEAYAKRLVEYDRNSAARTTVIDDQSDYYEIEGNNWLSNEEKQLLRKKQEETEEAELAKRSKVVVTFDLVGRKV 156          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: A0A835DGP0_9MAGN (zf-C2HC5 domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DGP0_9MAGN)

HSP 1 Score: 100 bits (248), Expect = 3.980e-19
Identity = 79/211 (37.44%), Postives = 118/211 (55.92%), Query Frame = 3
Query:  378 TTNPSRT---IPTQSGKKKKAPSTTAPSHASTSGGKSKGGGTQQRPTVKAASPQPSTKSQLPPQKWSGVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAG-SANDQPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVV 992
            T  P+RT   +   SG++ K P+ T  S ++  G +   G ++++   K  S   + K  +  Q+  G  C C A RH L++NC +CGKI CE EG   CSFC + +   G      ++YAG   +  P S A A A A  ++L+ +DR S ART V+DDQ D++     +WLS EE+E  +  +   +E + ARR KV V+FD++GRKVV
Sbjct:  107 TKRPTRTPKEVTVSSGRENKIPTETVESKSTHKGNQ---GNSKKKKAGKVVSLAEAAKGSIVFQQ--GKPCLCQARRHRLVSNCLSCGKIVCEQEGEGPCSFCGALVLKEG------STYAGLEESGLPLSDAEAAAEAFSKRLVDYDRNSAARTTVIDDQSDYYEIEGNSWLSIEEKEHLKKKQQEIEEAERARRSKVVVTFDLVGRKVV 306          
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Match: M5WMR8_PRUPE (zf-C2HC5 domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5WMR8_PRUPE)

HSP 1 Score: 98.2 bits (243), Expect = 4.740e-19
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 3
Query:  570 GVTCTCMAIRHSLITNCTTCGKIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSAND-QPQSAALAKAVARKEKLLLFDRTSVARTRVLDDQGDHFSTY--NWLSREERERAEANEVARKEEQLARRRKVTVSFDIMGRKVV 992
            G  C+C A RH L++NC +CGKI CE EG   C+FC + +   G      ++YAG      P S A A A A  ++L+ +DR S ART V+DDQ D++     +WLS+EE+E     +   +E + A+R KV VSFD++GRKV+
Sbjct:  169 GKPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCNFCGALVLKEG------STYAGLEESFAPTSDAEAAAEAYAKRLVEYDRDSAARTTVIDDQSDYYEIEGNSWLSKEEKELLIKKQEEIEEAERAKRSKVVVSFDLVGRKVI 306          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig760.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY4_9PHAE4.780e-4743.38zf-C2HC5 domain-containing protein n=1 Tax=Ectocar... [more]
D7FU14_ECTSI2.170e-4545.93Similar to thyroid hormone receptor interactor 4 i... [more]
A0A2I0XBL4_9ASPA2.150e-2040.72zf-C2HC5 domain-containing protein n=2 Tax=Dendrob... [more]
A0A6A1UG91_9ROSI3.700e-2044.44Activating signal cointegrator 1 n=2 Tax=Morella r... [more]
A0A2G5F3U0_AQUCA1.260e-1942.86zf-C2HC5 domain-containing protein n=1 Tax=Aquileg... [more]
UPI0009F2EBB91.470e-1943.66activating signal cointegrator 1 isoform X2 n=1 Ta... [more]
UPI0009E32E0D1.800e-1943.06activating signal cointegrator 1 n=1 Tax=Phalaenop... [more]
B9GZD7_POPTR2.180e-1941.26zf-C2HC5 domain-containing protein n=2 Tax=Populus... [more]
A0A835DGP0_9MAGN3.980e-1937.44zf-C2HC5 domain-containing protein n=1 Tax=Tetrace... [more]
M5WMR8_PRUPE4.740e-1942.36zf-C2HC5 domain-containing protein n=1 Tax=Prunus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig760contigC-tenellus_contig760:7581..9216 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FU14
PFAMszf-C2HC5
Model size1460
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.8e-48
EggNOG OGsKOG2845@1|root,KOG2845@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, C2HC5-type
Ec32 orthologEc-27_001060.1
Descriptiontranscription coactivator activity
Cds size957
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790046.7363055-UTR-C-tenellus_contig760:7580..76631680790046.7363055-UTR-C-tenellus_contig760:7580..7663Choristocarpus tenellus KU2346UTRC-tenellus_contig760 7581..7663 +
1680790046.7535415-UTR-C-tenellus_contig760:7839..80881680790046.7535415-UTR-C-tenellus_contig760:7839..8088Choristocarpus tenellus KU2346UTRC-tenellus_contig760 7840..8088 +
1680790046.7766173-UTR-C-tenellus_contig760:9045..92161680790046.7766173-UTR-C-tenellus_contig760:9045..9216Choristocarpus tenellus KU2346UTRC-tenellus_contig760 9046..9216 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790046.7658691-CDS-C-tenellus_contig760:8088..90451680790046.7658691-CDS-C-tenellus_contig760:8088..9045Choristocarpus tenellus KU2346CDSC-tenellus_contig760 8089..9045 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig760.2.1prot_C-tenellus_contig760.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig760 8089..9045 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig760.2.1

>prot_C-tenellus_contig760.2.1 ID=prot_C-tenellus_contig760.2.1|Name=mRNA_C-tenellus_contig760.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=319bp
MTSVPTTQPVATPLPTTNPSRTIPTQSGKKKKAPSTTAPSHASTSGGKSK
GGGTQQRPTVKAASPQPSTKSQLPPQKWSGVTCTCMAIRHSLITNCTTCG
KIACEAEGGYECSFCRSPLPVTGREPTATNSYAGSANDQPQSAALAKAVA
RKEKLLLFDRTSVARTRVLDDQGDHFSTYNWLSREERERAEANEVARKEE
QLARRRKVTVSFDIMGRKVVEADNEETPQSSGEAVTTLGEQRDAQLQGSG
DNSPESRAGENKQSSLPDRPSLHNSGLQGRAKEVYDIMRANLDKRQRHVH
GTSRRSISNRSTRDPRKA*
back to top

mRNA from alignment at C-tenellus_contig760:7581..9216+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig760.2.1 ID=mRNA_C-tenellus_contig760.2.1|Name=mRNA_C-tenellus_contig760.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1636bp|location=Sequence derived from alignment at C-tenellus_contig760:7581..9216+ (Choristocarpus tenellus KU2346)
TTGCCAGCCACCTTCTTACCTTCTCTTCTTCGCAGACAGCTGAATTGAGA CTCTACCTTGAGCAGTTTCTGGGGGATTCAAAGGCAAGCTATGGAAATGA GAAGGCTGAGCGAGAGATCCCATTATCTATAGTAACGTCACCGACCTTAG ACAACGGAAAGAAGTGCGATCGGTCCCGCCCTTTCGTAAGAGCTCATATA TGATGTCTGACGCGTAATATCGACTACACCTCACGCTTTCATCGAATCTG TTGCAGCAGGAGGTCCGTGACCTTTGCTCAGAACTCATCAAGCGACTGGG GAATGAGGGGGTAAGGAAAGGAACTAAGACTGAGGCGAAGGGTGACTTTT GGGATGCCACTACATCTGAGATAGGTCATGCATCGAACCAGACAGCTAGA CAGGGGCAGCGACAGGGGCAAGGAAACAAAGGGAAGGGTAAGGGAAGAGG GAAGGTATACCAGAAAATTGCTGCTGAGGATTTTTGGGGGGGTGGAACCT CATCAAGCATGACAAGCGTACCTACTACTCAACCTGTAGCAACCCCACTC CCAACCACTAACCCATCACGTACTATTCCAACCCAGTCTGGCAAGAAAAA GAAAGCACCATCCACTACTGCTCCATCGCATGCCTCGACTTCTGGTGGGA AGAGCAAAGGAGGTGGAACTCAACAGCGTCCAACAGTGAAAGCAGCTAGC CCTCAGCCCTCTACCAAGTCACAACTTCCGCCACAAAAATGGTCGGGAGT GACCTGTACCTGCATGGCAATAAGGCACAGTCTGATAACCAACTGCACGA CCTGTGGCAAGATAGCCTGTGAAGCAGAGGGTGGTTACGAATGTTCGTTC TGCAGGTCTCCCCTCCCTGTAACAGGGAGGGAACCCACAGCAACTAACAG CTATGCAGGGTCTGCGAATGATCAGCCACAGTCGGCGGCACTGGCAAAGG CTGTTGCCCGCAAAGAAAAGCTCCTGCTTTTTGACCGTACATCCGTGGCC AGGACACGTGTCCTAGACGATCAGGGAGATCACTTCTCTACCTACAATTG GCTATCACGGGAGGAGAGAGAACGTGCCGAGGCCAATGAAGTGGCCCGCA AGGAAGAGCAGTTGGCCAGACGTAGAAAAGTGACTGTGTCCTTTGACATT ATGGGACGCAAGGTTGTTGAGGCAGACAATGAGGAAACACCACAAAGTTC TGGTGAAGCAGTGACAACTCTAGGCGAGCAGAGGGATGCACAACTTCAGG GTAGTGGAGATAACAGTCCCGAGTCAAGGGCAGGAGAAAATAAGCAAAGT TCACTTCCTGACCGCCCATCATTGCATAACTCGGGTCTACAGGGCCGTGC CAAGGAGGTTTATGATATCATGCGTGCCAACCTGGACAAGAGGCAAAGAC ACGTCCATGGTACTAGCAGAAGGTCCATTAGCAATAGAAGTACTAGAGAT CCTAGGAAGGCTTAATGGTGCAGCCTATACCCTGTTACAAACAAGGTCCA AGGCCACCATTATTGCCAGTCAGTGATACCTAAAAAGGTAAGACGCTCAG TGAATCATCTCCTTCCATGTAAGGAGGTAGACAGCAAGATGAGAACAAGG AACTACCGACTATTGTCCAAATGGATAGTTAAAACA
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig760:7581..9216+

>mRNA_C-tenellus_contig760.2.1 ID=mRNA_C-tenellus_contig760.2.1|Name=mRNA_C-tenellus_contig760.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=957bp|location=Sequence derived from alignment at C-tenellus_contig760:7581..9216+ (Choristocarpus tenellus KU2346)
ATGACAAGCGTACCTACTACTCAACCTGTAGCAACCCCACTCCCAACCAC
TAACCCATCACGTACTATTCCAACCCAGTCTGGCAAGAAAAAGAAAGCAC
CATCCACTACTGCTCCATCGCATGCCTCGACTTCTGGTGGGAAGAGCAAA
GGAGGTGGAACTCAACAGCGTCCAACAGTGAAAGCAGCTAGCCCTCAGCC
CTCTACCAAGTCACAACTTCCGCCACAAAAATGGTCGGGAGTGACCTGTA
CCTGCATGGCAATAAGGCACAGTCTGATAACCAACTGCACGACCTGTGGC
AAGATAGCCTGTGAAGCAGAGGGTGGTTACGAATGTTCGTTCTGCAGGTC
TCCCCTCCCTGTAACAGGGAGGGAACCCACAGCAACTAACAGCTATGCAG
GGTCTGCGAATGATCAGCCACAGTCGGCGGCACTGGCAAAGGCTGTTGCC
CGCAAAGAAAAGCTCCTGCTTTTTGACCGTACATCCGTGGCCAGGACACG
TGTCCTAGACGATCAGGGAGATCACTTCTCTACCTACAATTGGCTATCAC
GGGAGGAGAGAGAACGTGCCGAGGCCAATGAAGTGGCCCGCAAGGAAGAG
CAGTTGGCCAGACGTAGAAAAGTGACTGTGTCCTTTGACATTATGGGACG
CAAGGTTGTTGAGGCAGACAATGAGGAAACACCACAAAGTTCTGGTGAAG
CAGTGACAACTCTAGGCGAGCAGAGGGATGCACAACTTCAGGGTAGTGGA
GATAACAGTCCCGAGTCAAGGGCAGGAGAAAATAAGCAAAGTTCACTTCC
TGACCGCCCATCATTGCATAACTCGGGTCTACAGGGCCGTGCCAAGGAGG
TTTATGATATCATGCGTGCCAACCTGGACAAGAGGCAAAGACACGTCCAT
GGTACTAGCAGAAGGTCCATTAGCAATAGAAGTACTAGAGATCCTAGGAA
GGCTTAA
back to top