mRNA_C-tenellus_contig7569.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A835YRS3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS3_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.950e-36 Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 106 GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEYQAKLQADGK 336 GKYDG++WD+AAK+DVLSTYDASKPW E NFDP+K+D GN+CD G+YPGEGKYKDPIRP+VS+AEYQ + + K Sbjct: 37 GKYDGKLWDEAAKQDVLSTYDASKPWGETNFDPYKRDGNGNACDPSGYYPGEGKYKDPIRPSVSFAEYQKQREEAAK 113
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: D7G3Z1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Z1_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.980e-30 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 106 GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEY---QAKLQADG 333 GKYDG++WDDAAK DV S Y+ ++PWS+ NFDPF KDA GN CD+ G+YPGE YKDPIRPAVS+A+Y +AK +A+G Sbjct: 52 GKYDGKLWDDAAKDDVKSMYNPNEPWSDNNFDPFVKDAAGNKCDSSGYYPGETMYKDPIRPAVSYADYLAAKAKKEAEG 130
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S2CF61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CF61_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.180e-21 Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 43 AGVSGFVVPPSGAVRAP-ALLGGKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEYQAKLQA 327 AG S FVVP +R A+ GKYD Q+WD AAK+DV + +D P S++NF+PF+++A GN+ D GF+PGE KYKDP+RP S+ A+ A Sbjct: 14 AGASAFVVPT--VLRTSVAVKYGKYDEQLWDIAAKQDVFAAWDPQSPRSDVNFNPFERNADGNAADCSGFFPGEAKYKDPMRPDASFEIMMAENAA 107
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S3NH85_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NH85_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.720e-20 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 49 VSGFV--VPPSGAVRAPALLGGKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEYQAKLQ 324 +SGF+ P S V+ P GKYDGQ+WD AK D+ + +D + P SE NF+PF+++ GN+CD G++PG+ KYKDP+RP++ +A A+ + Sbjct: 16 ISGFMHQTPVSRPVK-PIFGAGKYDGQLWDMEAKMDIWNMWDPNSPRSETNFNPFERNNDGNACDPSGWFPGDTKYKDPMRPSMDYAGMLAEKE 108
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: B7G965_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G965_PHATC) HSP 1 Score: 85.5 bits (210), Expect = 4.130e-19 Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 1 MKTSFALCCMAVAAAGVSGFVVPPSGAVRAPALL--GGKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSW 300 MKT+F VA A S F PS R+ L GGKY+GQ++D+ AKKDV + +D S+P S +NF+PF+ +GNS D GFYPGEG YKDPIR VS+ Sbjct: 1 MKTAFFAVLSLVATA--SAFAPQPSFGARSMTHLFSGGKYEGQLFDNDAKKDVYAAWDPSQPRSPLNFNPFET-WEGNSPDASGFYPGEGGYKDPIRGDVSF 99
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S2VAU7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAU7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.350e-18 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 106 GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEYQAK 318 GKYDGQ W+ AK+++ + +D ++P S NF+PF+ +GNS D GFYPGEG+YKDP+RP VS+A QA+ Sbjct: 77 GKYDGQEWNIDAKQEIYAAWDPAQPRSVFNFNPFET-FEGNSPDASGFYPGEGRYKDPVRPDVSFASMQAE 146
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S1TN95_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN95_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.680e-18 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 28 MAVAAAGVSGFVVPPSGAVRAPALLGGKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAEYQAKLQ 324 +A A G + VP + R + KY GQVWD A KDV + +D + P +E NF+PF+K+ GN CD G++PG+G Y+DPIRP V + + A+ + Sbjct: 36 IAAALFGGANAFVPAATNGRMATKINSKYFGQVWDFEAMKDVYNQWDPNAPRTEDNFNPFEKNKDGNQCDPNGWFPGDGLYRDPIRPDVDFMKVMAEQE 134
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S4IKF6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKF6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.140e-16 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 MKTSFALCCMAVAAAGVSGFVVPPSGAVRAPALLG---GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWAE 306 MKT+FAL +A +A S F GA R + G+YD Q+WD AKKDV + +D + P S NF+PF+ +GNS D G YPGE +YKDPIRP ++ + Sbjct: 1 MKTAFALVTLAASA---SAFAPARFGASRRTTAVFFEYGEYDEQLWDSEAKKDVYTKWDPNSPRSTKNFNPFET-FEGNSPDASGIYPGETRYKDPIRPDTNFQQ 101
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S4HPX0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPX0_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 8.700e-16 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 106 GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSW 300 GKYD Q+WD AKK++ + +D + P S NF+PF+ +GNS D GFYPGEG+YKDP RP VS+ Sbjct: 115 GKYDEQMWDGDAKKEIYAAWDPNSPRSPANFNPFET-WEGNSPDASGFYPGEGRYKDPARPDVSF 178
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Match: A0A7S0AS99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AS99_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.310e-15 Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 106 GKYDGQVWDDAAKKDVLSTYDASKPWSEINFDPFKKDAKGNSCDTRGFYPGEGKYKDPIRPAVSWA---EYQAKLQADG 333 GKYD Q+WD AAKKDV ST+D + P + NF+PF+ GNS D G YPGE +YKDP R V++A E +A L+A G Sbjct: 41 GKYDEQLWDHAAKKDVYSTWDPNAPRTSANFNPFET-FDGNSPDASGIYPGENRYKDPKRGDVNYAQMLEEKADLEAMG 118 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7569.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7569.2.1 >prot_C-tenellus_contig7569.2.1 ID=prot_C-tenellus_contig7569.2.1|Name=mRNA_C-tenellus_contig7569.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=113bp MKTSFALCCMAVAAAGVSGFVVPPSGAVRAPALLGGKYDGQVWDDAAKKDback to top mRNA from alignment at C-tenellus_contig7569:2058..2869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7569.2.1 ID=mRNA_C-tenellus_contig7569.2.1|Name=mRNA_C-tenellus_contig7569.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=812bp|location=Sequence derived from alignment at C-tenellus_contig7569:2058..2869+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7569:2058..2869+ >mRNA_C-tenellus_contig7569.2.1 ID=mRNA_C-tenellus_contig7569.2.1|Name=mRNA_C-tenellus_contig7569.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=339bp|location=Sequence derived from alignment at C-tenellus_contig7569:2058..2869+ (Choristocarpus tenellus KU2346)back to top |