mRNA_C-tenellus_contig7551.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7551.1.1
Unique NamemRNA_C-tenellus_contig7551.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7S3DK90_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DK90_9EUKA)

HSP 1 Score: 169 bits (427), Expect = 5.420e-46
Identity = 88/155 (56.77%), Postives = 109/155 (70.32%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            PA+ F L  PI  GL  +GKYDGK PSLT ATSAGK+ +H+P ERS    SG +          ++RFLNINK+ITAL+AGALD+    D L++GT TNLL YDVE+NSDIFY+D+ DGV A+  G + S  E + VVGGNCSIQGF+A+G E Y
Sbjct:    4 PAFQFQLKTPIIKGLATVGKYDGKHPSLTFATSAGKVQMHNPFERSI---SGNT----------ESRFLNINKQITALSAGALDKEMGRDVLMVGTATNLLVYDVEENSDIFYRDVPDGVNAMQFGEVGSDGETMCVVGGNCSIQGFDAEGNEVY 145          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7S1G4Y1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.940e-46
Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSY--IDRSGQSSEKVPVDSL-QDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            P +  HLNN I   L  +G YDGK PSLTC TSAGK+ IHSPH R       +G S+     D   QD RFLNIN+K+TAL +G L  + + DTL +GT+TNLLAY+ E NSD+F+KD+ DGV  L  G + + + PLVVVGGNCSIQGF+A G+E +
Sbjct:    4 PVFQLHLNNGINVRLATVGYYDGKHPSLTCGTSAGKVFIHSPHNREAPAAGGAGGSAYAAGTDPKNQDIRFLNINRKVTALTSGRLQVDGDGDTLCVGTQTNLLAYNTEDNSDLFFKDVPDGVSTLLFGKVQTIEAPLVVVGGNCSIQGFDAAGLELF 161          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A836CLB0_9STRA (Ciliary BBSome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.130e-44
Identity = 80/159 (50.31%), Postives = 113/159 (71.07%), Query Frame = 1
Query:   16 IKTAPAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            ++ +PA+ F+L   I+P   CIGKYDGK P LT AT+AGK+LIH+ HE++ + + G +   +        +FLNIN+K+T+LAAG L  +A  DTL + +ETNLLAY VE+N D+FYK++ DG   +A+G LP + +PL VVGGNCS+QGF+ DG ER+
Sbjct:    1 MQLSPAFEFNLGTSIKPKQACIGKYDGKHPCLTVATAAGKVLIHNAHEKA-LQQGGTADPAI--------KFLNINRKVTSLAAGRLAADAACDTLFVCSETNLLAYAVEQNKDLFYKEVPDGASVIAIGTLPGAGQPLAVVGGNCSLQGFDEDGEERF 150          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7S2KX32_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KX32_9DINO)

HSP 1 Score: 155 bits (391), Expect = 1.450e-44
Identity = 73/161 (45.34%), Postives = 103/161 (63.98%), Query Frame = 1
Query:   10 EVIKTAPAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            E+++  PA+ F L  P+  G+V IGKYDG  P LT  T+AGK+LIHSPH R               D+  +   LNI+KKIT++  G L  N  HD L++GT+T+L  YDVE+N+D+F+K++ DGV  +A G +P    P+ VVGGNCS+QGF+ +G E +
Sbjct:    1 EIVEMIPAFQFSLRQPVLYGIVTIGKYDGVHPCLTAGTNAGKLLIHSPHNRGE-------------DNQNEVNVLNIDKKITSVCTGLLSPNLGHDVLMVGTQTSLWVYDVEENADLFFKEVHDGVNVVAFGTIPKVTAPVCVVGGNCSLQGFDHEGSELF 148          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7M7MXA7_STRPU (Bardet-Biedl syndrome 2 protein homolog n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7MXA7_STRPU)

HSP 1 Score: 164 bits (414), Expect = 4.300e-44
Identity = 80/155 (51.61%), Postives = 111/155 (71.61%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            P +T  LN+ I P +V IGKYDGK P+LT AT+AGK+ +H+PH R+   R G++SE + VDS  D   LNIN+KI+A+ AG+LD    +D L++GT+TNLLAYDV+ N+DIFYKD  DGV A+ MG L +   PL + GGNC++ GF+ +G + +
Sbjct:    4 PIFTLKLNHKINPRMVTIGKYDGKHPNLTAATTAGKVFVHNPHTRAV--RGGRASE-IAVDS--DISLLNINQKISAICAGSLDSMGVNDILMVGTQTNLLAYDVQNNTDIFYKDAPDGVNAVVMGKLGTINTPLAITGGNCALSGFDIEGNDLF 153          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: UPI00035942AE (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035942AE)

HSP 1 Score: 164 bits (415), Expect = 4.980e-44
Identity = 77/155 (49.68%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            P +T  LN+ + P  V +G+YDG+ P+LTCAT+AGK+L+HSPH +     SG  S         D   LNIN++IT+LA+G LD N E D L++GT TN+LAYD+  N D+FYKD  DG  A+ +G L S + PL VVGGNCSIQG+N++G + +
Sbjct:    4 PIFTLKLNHRVTPRAVAVGRYDGRHPALTCATTAGKVLVHSPHTKQIDSGSGTGS---------DISLLNINQQITSLASGQLDLNCEGDLLVVGTPTNVLAYDINNNRDLFYKDSPDGANAITIGMLGSIETPLAVVGGNCSIQGYNSEGEDSF 149          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: UPI001B88DF7C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DF7C)

HSP 1 Score: 164 bits (414), Expect = 4.980e-44
Identity = 76/155 (49.03%), Postives = 109/155 (70.32%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            P +T  LN+ +   +V IGKYDG  PSL+CAT+AGK++IH+PH R      GQ++ ++ + +  D   LNIN+++T++ AG LD NA  D L++GT+TN+LAYDVE NSD+FYKD  DG  A+ +G L S + PL ++GGNCSIQGF+  G + +
Sbjct:    4 PIFTLKLNHKVNARMVTIGKYDGTNPSLSCATTAGKVIIHNPHNR------GQNTGRMSLSAEGDISLLNINQQVTSVCAGVLDGNAAKDVLVVGTQTNVLAYDVENNSDLFYKDTPDGSNAIIVGKLGSIETPLAIIGGNCSIQGFDKGGNDSF 152          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A8J5XCQ5_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCQ5_DIALT)

HSP 1 Score: 161 bits (408), Expect = 2.590e-43
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            PA+   + +PI PGL  +GKYDG  P LTCAT+AG++ IHSPHER     +             + + LNIN+KITA+AAG +D  +  D LL+G +T L AYD+  N+DIFYKD+ DGV A+ +G + +  +PL +VGGNCSIQGF+ +G E++
Sbjct:    4 PAFKLDMKSPILPGLAVVGKYDGLSPCLTCATTAGRVFIHSPHERDQFTNA-------------EMQHLNINRKITAIAAGVIDARSTKDALLVGAQTTLFAYDIRNNADIFYKDVPDGVNAMKVGMINAHDQPLAIVGGNCSIQGFDHEGAEQF 145          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL)

HSP 1 Score: 161 bits (408), Expect = 2.910e-43
Identity = 72/158 (45.57%), Postives = 114/158 (72.15%), Query Frame = 1
Query:   19 KTAPAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            +  PA+   L N I+ GL  + K++G++P LTCAT+ GK+ IH+PHER  +     + E+   D+ ++ ++LNIN+ +TALA+G L+  +++D LL+GT+TNLLAYDVE+N D+FY+++ DG+ ++  G + S ++ L +VGGNCSIQGF+ADG E +
Sbjct:    6 QLTPAFELTLKNTIQEGLATVAKFNGEQPCLTCATAGGKVFIHNPHERGDL-----TVEQPSADAQKNIKYLNINRTVTALASGPLNPKSKNDILLVGTQTNLLAYDVEQNKDVFYREVPDGINSMTFGKVGSIEDQLAIVGGNCSIQGFDADGNELF 158          
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Match: A0A7S0E3E9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E3E9_9EUKA)

HSP 1 Score: 158 bits (400), Expect = 3.180e-43
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 1
Query:   28 PAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHSPHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDTLLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGNCSIQGFNADGIERY 492
            PA+   LNNPI  GLV +GKYDG+ PSLTCAT+AGKI  H+PH     D+SGQ+          + +FLNIN+KI+AL  G L    + D L +G +T LLAYDV++N D+F+KD  DG  A+ +G L   + PL +VGGNCSIQG++A+G E +
Sbjct:    4 PAFKLQLNNPILKGLVDVGKYDGEYPSLTCATTAGKIFFHTPH-----DKSGQN----------EVKFLNINRKISALTCGRLATKHQRDLLFVGAQTTLLAYDVQENCDLFFKDAPDGANAILVGKLGDLEAPLALVGGNCSIQGYDAEGSEEF 143          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7551.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3DK90_9EUKA5.420e-4656.77Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A7S1G4Y1_9STRA8.940e-4653.80Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A836CLB0_9STRA1.130e-4450.31Ciliary BBSome complex subunit 2 n=1 Tax=Tribonema... [more]
A0A7S2KX32_9DINO1.450e-4445.34Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7M7MXA7_STRPU4.300e-4451.61Bardet-Biedl syndrome 2 protein homolog n=2 Tax=Ec... [more]
UPI00035942AE4.980e-4449.68Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Ap... [more]
UPI001B88DF7C4.980e-4449.03Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gi... [more]
A0A8J5XCQ5_DIALT2.590e-4347.74Uncharacterized protein n=3 Tax=Diacronema lutheri... [more]
A0A7S1IWS5_9EUGL2.910e-4345.57Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0E3E9_9EUKA3.180e-4350.32Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7551contigC-tenellus_contig7551:914..2753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog6500.XP_005107459.1
Preferred nameBBS2
PFAMsBBS2_C,BBS2_Mid,BBS2_N
Model size492
Max annot lvl33208|Metazoa
KEGG koko:K16747
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001085,GO:0001103,GO:0001501,GO:0001578,GO:0001894,GO:0001895,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003018,GO:0003352,GO:0003356,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005902,GO:0005929,GO:0006810,GO:0006892,GO:0006893,GO:0006928,GO:0006936,GO:0006939,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007368,GO:0007369,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007600,GO:0007601,GO:0007610,GO:0008015,GO:0008104,GO:0008134,GO:0008150,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010605,GO:0010629,GO:0014820,GO:0014824,GO:0014829,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019221,GO:0019222,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021756,GO:0021761,GO:0021766,GO:0021987,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0030534,GO:0030900,GO:0031090,GO:0031253,GO:0031514,GO:0031667,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032400,GO:0032401,GO:0032402,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034464,GO:0034613,GO:0035082,GO:0035150,GO:0035296,GO:0036064,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040015,GO:0040018,GO:0042221,GO:0042310,GO:0042311,GO:0042592,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0044085,GO:0044320,GO:0044321,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045444,GO:0045494,GO:0045926,GO:0045927,GO:0046907,GO:0048193,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048640,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050880,GO:0050896,GO:0050953,GO:0051093,GO:0051094,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0051716,GO:0051875,GO:0051877,GO:0051904,GO:0051905,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060632,GO:0061448,GO:0061512,GO:0061951,GO:0065007,GO:0065008,GO:0070121,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071345,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090066,GO:0090150,GO:0097458,GO:0097722,GO:0097746,GO:0097755,GO:0097756,GO:0098588,GO:0098590,GO:0098858,GO:0098862,GO:0098876,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902019,GO:1903441,GO:1905515,GO:1990778,GO:2000145
Exons4
Evalue8.16e-45
EggNOG OGs2C0K6@1|root,2QPWU@2759|Eukaryota,38CFK@33154|Opisthokonta,3BA3E@33208|Metazoa,3CWRC@33213|Bilateria
Descriptionnegative regulation of appetite by leptin-mediated signaling pathway
Cds size492
COG categoryZ
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790043.9845107-CDS-C-tenellus_contig7551:913..10361680790043.9845107-CDS-C-tenellus_contig7551:913..1036Choristocarpus tenellus KU2346CDSC-tenellus_contig7551 914..1036 -
1680790043.9993303-CDS-C-tenellus_contig7551:1545..16651680790043.9993303-CDS-C-tenellus_contig7551:1545..1665Choristocarpus tenellus KU2346CDSC-tenellus_contig7551 1546..1665 -
1680790044.0084913-CDS-C-tenellus_contig7551:2394..25551680790044.0084913-CDS-C-tenellus_contig7551:2394..2555Choristocarpus tenellus KU2346CDSC-tenellus_contig7551 2395..2555 -
1680790044.0220683-CDS-C-tenellus_contig7551:2665..27531680790044.0220683-CDS-C-tenellus_contig7551:2665..2753Choristocarpus tenellus KU2346CDSC-tenellus_contig7551 2666..2753 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7551.1.1prot_C-tenellus_contig7551.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7551 914..2753 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7551.1.1

>prot_C-tenellus_contig7551.1.1 ID=prot_C-tenellus_contig7551.1.1|Name=mRNA_C-tenellus_contig7551.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=164bp
MTGEVIKTAPAYTFHLNNPIEPGLVCIGKYDGKRPSLTCATSAGKILIHS
PHERSYIDRSGQSSEKVPVDSLQDTRFLNINKKITALAAGALDQNAEHDT
LLIGTETNLLAYDVEKNSDIFYKDLTDGVGALAMGCLPSSQEPLVVVGGN
CSIQGFNADGIERY
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mRNA from alignment at C-tenellus_contig7551:914..2753-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7551.1.1 ID=mRNA_C-tenellus_contig7551.1.1|Name=mRNA_C-tenellus_contig7551.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1840bp|location=Sequence derived from alignment at C-tenellus_contig7551:914..2753- (Choristocarpus tenellus KU2346)
ATGACTGGAGAAGTGATCAAGACAGCCCCTGCTTATACGTTTCACCTCAA CAATCCAATTGAGCCGGGTCTGGTCTGCATCGGCAAATGTAAGAAGTGAC GAAGTGGAACGCTCGACAGGGTAAGTGACATCCTGATCACAAAATCAGTT CTTCCATGGACCACTGAGTCACTTTTGCCCGTTTTGTCCCTATCTTAGAC GACGGCAAGAGACCTTCCCTCACATGTGCCACATCTGCGGGGAAGATTCT CATCCACAGTCCTCATGAGCGCAGCTACATAGACAGGTCAGGGCAGAGTT CAGAGAAGGTTCCAGTTGATAGCTTACAGGACACCCGCTTTCTCAACATT AACAAGAAGGTGCGTGGTATGTTCATGTTTAACATAAATGCTTCCAAATG TATGAGGACACTACGTGACTGGAACTGGGAAATGAGCTTGACTTCAATAC ATTTTGTGGTTTCCAAGGACTTGAAACAAATCAACAGGAAACCTTTGCGA AGAATTTGTGACTGCTACATATCTCATTTCTCAGTGGTTTCGCATACCCT CACATTCCAATTATCCAGGTACATCTTTTCGATGTCTCACACACCAACTC GATTAATCTCCAGAGTCAACCTGCCATCATGTCTATCTGCATTGTATGCT TGAATTGCAAAACCCCAGAGGAATGATGAACAGCATGGGGGTCTAACTCA GTTCCGAAAGACCCAAGGAAAGTGCCTCTAGAAACATATTTCAATTATTT CTACTACCTTTCCTTAGTATTAATAAAGAAAGCAACATATTCCCTGCATC TGAGCAAGCGACAATATCCCTGATCCTGATTAAAGACGTGCTGAGAACTG GCGGGGCGAAAATACCACGGGTTCCTATTCTTACCTGCACCATGCCAACG TTGAGGGAGTAGTAGAAATTACAGGACAGACCTATCTTATTGGCTCAGTG TGAGATGTAACCAATTCTGTTGGTGTAATGACTTTTTTTCGAAGTCAAGC CTTCTCCCCCCTCATACTTATCATGCATCTCCAATAAAACCATGCTTTCT ACTCCTGGACGGCCCCTGATATCCCTTTCTGGGTGAAGATCACTGCTCTC GCAGCAGGTGCTTTAGACCAGAATGCGGAGCATGACACCCTCTTGATTGG GACCGAGACAAATCTTCTGGCTTATGATGTCGAGAAGAATTCAGATATTT TCTATAAGGTACCTCCTACACCGCAGGATTATTTTGGAGTGACCTTTTTT TTAGCATGGAGTGTTGGGATGGCAAAATGAGCAGGGAAAAAAGAGCACAC AAACGTACCAGGCTAATGGTGATCCCAGATTTCAGTCATAGTATTCCCCT CAATACCTAAACTAATGGGTTTCCTTTTGTATGGGCTGAGAGGGTCATGG CACCAACTTCATCCCTCCACAAATGAAAAGGGGGTGACTGTTGGAGAGAA CACATCAATCGGGAATCAGCATTGGTCCGAGACTTGTGTTGTTTTTCAGG AACTGGGTTCACTCTTCATTAGGCAGGGACAAACAAGGGACCATGTCAAG AGCGGGAAAATTGTTGTGGTATCGAATTAAGTCTCCTTAGTGCCTTCCAA TAATTCAATTTAGAGTTTGAGGCTAGGAACTCTCTTGCGTAATGCTCTGG GACTGGAATTGTTCTTCCCACTGATCCTAGACCATAACTGTCTGCAAACC TCTCACAACCTGAACAGGATCTTACAGATGGTGTGGGTGCCTTGGCTATG GGATGCCTTCCGTCTTCCCAGGAACCTCTGGTGGTAGTTGGTGGAAACTG CTCCATCCAGGGATTCAACGCCGATGGGATAGAGAGGTAT
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Coding sequence (CDS) from alignment at C-tenellus_contig7551:914..2753-

>mRNA_C-tenellus_contig7551.1.1 ID=mRNA_C-tenellus_contig7551.1.1|Name=mRNA_C-tenellus_contig7551.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=492bp|location=Sequence derived from alignment at C-tenellus_contig7551:914..2753- (Choristocarpus tenellus KU2346)
ATGACTGGAGAAGTGATCAAGACAGCCCCTGCTTATACGTTTCACCTCAA
CAATCCAATTGAGCCGGGTCTGGTCTGCATCGGCAAATACGACGGCAAGA
GACCTTCCCTCACATGTGCCACATCTGCGGGGAAGATTCTCATCCACAGT
CCTCATGAGCGCAGCTACATAGACAGGTCAGGGCAGAGTTCAGAGAAGGT
TCCAGTTGATAGCTTACAGGACACCCGCTTTCTCAACATTAACAAGAAGA
TCACTGCTCTCGCAGCAGGTGCTTTAGACCAGAATGCGGAGCATGACACC
CTCTTGATTGGGACCGAGACAAATCTTCTGGCTTATGATGTCGAGAAGAA
TTCAGATATTTTCTATAAGGATCTTACAGATGGTGTGGGTGCCTTGGCTA
TGGGATGCCTTCCGTCTTCCCAGGAACCTCTGGTGGTAGTTGGTGGAAAC
TGCTCCATCCAGGGATTCAACGCCGATGGGATAGAGAGGTAT
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