mRNA_C-tenellus_contig7543.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: D7G5A9_ECTSI (Vesicle docking protein P115 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A9_ECTSI) HSP 1 Score: 317 bits (812), Expect = 1.950e-92 Identity = 226/429 (52.68%), Postives = 281/429 (65.50%), Query Frame = 1 Query: 196 HYLGTEAEGMSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTG----MRENGNREDFNDFSGVGENGADEEHFCVPLPSFQVIPLMTDLQSDIVSKAVEILLVLLEVGGGEGAEESQGQEKEQRWFTHSSNGDAGVRAVAGXXXXXXXXXXKSQSAVAGAASGLLVELLVHVAFSRAEPYCLVPLNCRRKAVRVMGAVVEGCQDNQHLVGEV 1470 YLG EG++P AAAGILV+RLKNAGD+GDRR+AL+ALL LS+ HP +VG AGMP+FTDILQAGIAD SM+QTI+ IMLNLV +G +N+++ L D+Q XXXXXXXXXXXXXXXXXXXXXXXXXX + SLE ILEC A +QAL+E LRDPREEVRNEVILLLG+LT +N EVKKFVAFQEGFERLF IM EGMLEGG VIVKDCL VC NL+ GSS+T+ LFCQSGCL H+L DVR +NG + + GE G+ EE + M+ +Q++I KA+++L++LL XXXXXX + Q+ VA + G+L E+L HVAFSRA+ + P+ CR +A+RV GA+V+G NQ+ +GE+ Sbjct: 2 EYLGPGNEGVTPQAAAGILVERLKNAGDMGDRRNALDALLKLSQDHPTDVGHAGMPIFTDILQAGIADRSMTQTIMGIMLNLVKEQG-----------ANVSSFLKDVQNXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGESLEACILECPAGLQALVEVLRDPREEVRNEVILLLGQLTTSNLEVKKFVAFQEGFERLFDIMSGEGMLEGGSVIVKDCLHVCNNLLSGSSLTKALFCQSGCLKRFHQLIDVRTSDGEDPAAVAAQNGPGTEVVG-AEKGEEGSGEEEKAPSHDGAPPMGAMSGMQNEIACKALDVLMLLLAXXXX---------------XXXXXXXXXXXXXXXXXXXXXXGKRPERQTLVAEVSEGMLSEMLAHVAFSRADAFSHAPVACRERAMRVTGALVDGHPTNQYNMGEL 403
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A836C866_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C866_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.090e-43 Identity = 150/457 (32.82%), Postives = 203/457 (44.42%), Query Frame = 1 Query: 223 MSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILE-CHASMQALMEALRDPREEVRNEVILLLGKLTATNH-EVKKFVAFQEGFERLFSIM---------------------------------------REEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGMRENGNREDFNDFSGVGENGADEEHFCVPLPSFQVIPLMTDLQSDIVSKAVEILLVLLEVGGGEGAEESQGQEKEQRWFTHSSNGDAGVRAVAGXXXXXXXXXXKSQSAVAGAASGLLVELLVHVAFSRAEPYCLVPLNCRRKAVRVMGAVVEGCQDNQHLVGEV 1470 M P A ILV+RLK AGD DRR ALE L+ LS++ PAEVG+ GM VF+DILQ G+ D S+ Q I++IMLNLV+ G + + A+L + A +LE +LE A +Q +++ L D RE VR E +LLL L A H E+ + VAFQEG ERLF+IM ++GM+ G +V DCL+ C ++ S V + LFCQS C+ VLH+L D+R L G E P PL+ +Q DI+ +A+++L +L + +G AG RA + Q A+ GAA GLL ELL HVA SRAEPYC P R A+ + +V G +NQ V E+ Sbjct: 1 MDPSRQAFILVERLKAAGDPSDRRHALEQLVDLSKSSPAEVGKHGMLVFSDILQCGLVDVSLGQHIMDIMLNLVSAPGAASDANAAAVLAGGGAMLQSL------LDLLESEDAVTAVGAARAVAALHARAPAALEACLLEEIPAGVQRVVDTLLDRREAVRAEGVLLLRALAAGGHAELARVVAFQEGPERLFAIMGQVTEDMLLLLLLLPPLLLPLLLXXXXXXXXXSPLLLHGAQDGMI-AGTQLVADCLEACAAVLGASHVARALFCQSRCIGVLHQLVDIRWLAHAAR------------GAAAAGGQRGEGAGAEAP-----PLVGPVQCDIMLRALDLLRLL---AAADSTTXXXXXXXXXXXXXXXXDG-AGDRA-------------QRQLALGGAARGLLAELLAHVAISRAEPYCRAPPRVRAAALAALTEIVYGHAENQRRVLEM 416
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A4D9DEK4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEK4_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.130e-24 Identity = 84/260 (32.31%), Postives = 128/260 (49.23%), Query Frame = 1 Query: 232 DAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQA---GIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQA---LMEALRDPREEVRNEVILLLGKLTA--TNHEVKKFVAFQEGFERLFSIMREEG-MLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGMRE 984 D A +++DRL++A D DR DA+E L L +T P+ VG+ MP+ D+L+A G D +Q ++E++ L++ PG+ + ++L+ A L+ S Q L+ L D REEVRNEV+L+LGKLT +K +AF EGFERL +++ ++G +LEGG VI DCL + N++ G++ TQ FC+ G L L DV ++ G E Sbjct: 24 DHAVAVILDRLRSARDPKDRADAVEQLQSLGKTDPSRVGRLAMPLVLDLLRARRLGQLDEGTAQGLLELLRALLSHAA-------PGVGREVLSLLLKNTGNLDALLDMAEKTDTLTTVATLQVLEAALEAGQGEVECALQGGGSQQGMVRLVACLSDEREEVRNEVLLVLGKLTTGRATENLKTLLAFNEGFERLLAMIEDDGGLLEGGSVITHDCLRLMGNVVAGTASTQRHFCELGPLETLAPWMDVTRVLAVGEEE 276
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A1B0D1B3_PHLPP (General vesicular transport factor p115 n=3 Tax=Phlebotominae TaxID=7198 RepID=A0A1B0D1B3_PHLPP) HSP 1 Score: 108 bits (269), Expect = 3.450e-21 Identity = 79/260 (30.38%), Postives = 123/260 (47.31%), Query Frame = 1 Query: 190 LTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAH---SLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELF 948 L LGT G P A + LVDR+ ++ L DRRDA AL LS+ + EVG GMP IL+ AD + ++ + N+++ + P ++ N+ M I+ + + L+ +L + LM+ L D RE VRN+ +LLL +LT N ++K VAF+ F+RLF +M+EEG +GG ++V+DCL + LNL+ +S Q F + + L +F Sbjct: 8 LKSVLGTPEAGQVPSGAETVEKLVDRVSSSTLLEDRRDACRALKALSKKYRIEVGAQGMPALVQILETDRADCEIIGYTLDTLCNIISPEQFDEELENPTVSVNVGEQFTEMFIKNPENVGLVLSYLEEYDFRVRWPSIKFLTSLIEYRPKELQEIVLVSPMGVSKLMDLLSDSREVVRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVMKEEGCSDGG-IVVEDCLILMLNLLKNNSSNQQFFKEGSYIQRLAPMF 266
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A6J1L949_DROHY (general vesicular transport factor p115 isoform X2 n=1 Tax=Drosophila hydei TaxID=7224 RepID=A0A6J1L949_DROHY) HSP 1 Score: 107 bits (266), Expect = 4.600e-21 Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1 Query: 178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858 + S + LG+ G P AA + LVDR+ ++ L DRRDA AL LS + EVG GMP +LQ D + ++ + N+VT + P ++ N+ M I+ + A+ L+ +L + LM+ L D RE +RN+V+LLL +LT N ++K VAF+ F+RLF I+REEG +GG ++V+DCL Sbjct: 4 LKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKSPEHVTLVMGYLDEYDFRVRRGAIQLITSLIANKTRELQELVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: UPI000E6E2476 (LOW QUALITY PROTEIN: general vesicular transport factor p115 n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E2476) HSP 1 Score: 107 bits (267), Expect = 6.070e-21 Identity = 80/272 (29.41%), Postives = 125/272 (45.96%), Query Frame = 1 Query: 184 SSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDI--QXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAH---SLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGM 978 S L LG G P A + LVDR+ + L DRRDA AL LS+ + EVG GM +L+ ADG + ++ ++N+ + R E G P + N+ +I + ++ H L+ IL + LM+ + D RE +RN++++LL LT N ++K VAF+ F+RLF I+R EG +GG ++V+DCL V LNL+ ++ Q F + + L + + D M Sbjct: 6 SGLKTVLGAAEPGDQPTGAETVERLVDRISTSTLLEDRRDACRALKALSKKYRLEVGAQGMGPLVQVLELDRADGEIVGYALDTLVNITSSRFPEEEGN-PAVTLNMGEQFTEIFIKNPDNVSLVLSYIEEYDFRIRWPAVKLLTCLSTHRPRELQDIILVSPMGVSKLMDVIGDSREVIRNDMLMLLIHLTTGNSNIQKIVAFENAFDRLFDIIRNEGCADGG-IVVEDCLIVMLNLLRNNTSNQQFFKEGSYIQKLSPMLVINSETDADM 275
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B4JMC8_DROGR (General vesicular transport factor p115 n=2 Tax=Drosophilinae TaxID=43845 RepID=B4JMC8_DROGR) HSP 1 Score: 107 bits (266), Expect = 8.130e-21 Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1 Query: 178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858 + S + LG+ G P AA + LVDR+ ++ L DRRDA AL LS + EVG GMP +LQ D + ++ + N+VT + P ++ N+ M I+ + A+ L+ +L + LM+ L D RE +RN+V+LLL +LT N ++K VAF+ F+RLF I+REEG +GG ++V+DCL Sbjct: 4 LKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKSPEHVTLVMGYLDEYDFRVRRAAIQLITSLIANKTRELQDLVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B4L819_DROMO (General vesicular transport factor p115 n=7 Tax=Drosophila TaxID=32281 RepID=B4L819_DROMO) HSP 1 Score: 105 bits (263), Expect = 1.960e-20 Identity = 74/234 (31.62%), Postives = 111/234 (47.44%), Query Frame = 1 Query: 178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858 + S + LG G P AA + LVDR+ ++ L DRRDA AL LS + EVG GMP +LQ D + ++ + N+VT + P ++ N+ M I+ + A+ L+ +L + LM+ L D RE +RN+V+LLL +LT N ++K VAF+ F+RLF I+REEG +GG ++V+DCL Sbjct: 4 LKSGIKTVLGGTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKNPDHVTLVMGYLDEYDFRVRRGAIQLITSLIANKTRELQELVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A7R8UFC0_HERIL (General vesicular transport factor p115 n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8UFC0_HERIL) HSP 1 Score: 105 bits (263), Expect = 1.980e-20 Identity = 75/266 (28.20%), Postives = 121/266 (45.49%), Query Frame = 1 Query: 178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAA-----ILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDV 954 + S L LG G P A + LV+R+ ++ L DRRDA AL LS + EVG GM +LQ AD + ++ + +VT + P ++ N+ L + + ++ +L ++ LM+ L D RE +RN+ +LLL +LT N ++K VAF+ F+RLF ++R+EG +GG +IV+DCL + LNL+ +S Q F + + L +F + Sbjct: 4 LKSGLKTVLGAPEPGQQPTGAETVERLVERVNSSTLLDDRRDACRALKALSRKYRIEVGAQGMSALIQVLQMDRADCEIISYALDTLCQIVTPEQFDEEADNPTVSVNVGEQFTEMFLKNSENVTLVLGYLEEYDFRVRWSAIKLLTTLLANKTKDIQEIVLVSPMAVSKLMDLLIDSREVIRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVVRDEGCSDGG-IIVEDCLILMLNLLKNNSSNQQFFKEGSYIQRLAPMFTI 268
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B0WXD3_CULQU (General vesicular transport factor p115 n=6 Tax=Culex TaxID=53527 RepID=B0WXD3_CULQU) HSP 1 Score: 105 bits (263), Expect = 1.990e-20 Identity = 75/264 (28.41%), Postives = 125/264 (47.35%), Query Frame = 1 Query: 178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELF 948 + S L LGT+ G +P A + LV+R+ ++ L DRRDA AL LS+ + EVG GMP +++ AD + ++ + ++ + E P + NI M I+ + A+ ++ +L + LM+ L D RE +RN+ +LLL +LT N ++K VAF+ F+RLF +++EEG +GG ++V+DCL + LNL+ + Q F + + L +F Sbjct: 4 LKSGLQTVLGTQEPGTAPSGAETVERLVERVSSSTLLDDRRDACRALKALSKKYRVEVGAQGMPALLQVMEMDRADAEIVGYCLDTLCHVTSPEQFEEESENPTVTVNIGEQFTEMFIKASENVGLVLNCLEEYDFRVRWSAIKLLTSLLANKPKEIQEIVLVSPMGVSKLMDLLIDSREVIRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVIKEEGCSDGG-IVVEDCLILMLNLLKNNPSNQQFFKEGSYIQRLAPMF 266 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7543.1.1 >prot_C-tenellus_contig7543.1.1 ID=prot_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=433bp MSSSLTHYLGTEAEGMSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSEback to top mRNA from alignment at C-tenellus_contig7543:1473..5114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7543.1.1 ID=mRNA_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3642bp|location=Sequence derived from alignment at C-tenellus_contig7543:1473..5114+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7543:1473..5114+ >mRNA_C-tenellus_contig7543.1.1 ID=mRNA_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1299bp|location=Sequence derived from alignment at C-tenellus_contig7543:1473..5114+ (Choristocarpus tenellus KU2346)back to top |