mRNA_C-tenellus_contig7543.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7543.1.1
Unique NamemRNA_C-tenellus_contig7543.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: D7G5A9_ECTSI (Vesicle docking protein P115 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A9_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 1.950e-92
Identity = 226/429 (52.68%), Postives = 281/429 (65.50%), Query Frame = 1
Query:  196 HYLGTEAEGMSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTG----MRENGNREDFNDFSGVGENGADEEHFCVPLPSFQVIPLMTDLQSDIVSKAVEILLVLLEVGGGEGAEESQGQEKEQRWFTHSSNGDAGVRAVAGXXXXXXXXXXKSQSAVAGAASGLLVELLVHVAFSRAEPYCLVPLNCRRKAVRVMGAVVEGCQDNQHLVGEV 1470
             YLG   EG++P AAAGILV+RLKNAGD+GDRR+AL+ALL LS+ HP +VG AGMP+FTDILQAGIAD SM+QTI+ IMLNLV  +G           +N+++ L D+Q XXXXXXXXXXXXXXXXXXXXXXXXXX   +  SLE  ILEC A +QAL+E LRDPREEVRNEVILLLG+LT +N EVKKFVAFQEGFERLF IM  EGMLEGG VIVKDCL VC NL+ GSS+T+ LFCQSGCL   H+L DVR            +NG   +    +  GE G+ EE           +  M+ +Q++I  KA+++L++LL                                    XXXXXX    + Q+ VA  + G+L E+L HVAFSRA+ +   P+ CR +A+RV GA+V+G   NQ+ +GE+
Sbjct:    2 EYLGPGNEGVTPQAAAGILVERLKNAGDMGDRRNALDALLKLSQDHPTDVGHAGMPIFTDILQAGIADRSMTQTIMGIMLNLVKEQG-----------ANVSSFLKDVQNXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGESLEACILECPAGLQALVEVLRDPREEVRNEVILLLGQLTTSNLEVKKFVAFQEGFERLFDIMSGEGMLEGGSVIVKDCLHVCNNLLSGSSLTKALFCQSGCLKRFHQLIDVRTSDGEDPAAVAAQNGPGTEVVG-AEKGEEGSGEEEKAPSHDGAPPMGAMSGMQNEIACKALDVLMLLLAXXXX---------------XXXXXXXXXXXXXXXXXXXXXXGKRPERQTLVAEVSEGMLSEMLAHVAFSRADAFSHAPVACRERAMRVTGALVDGHPTNQYNMGEL 403          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A836C866_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C866_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.090e-43
Identity = 150/457 (32.82%), Postives = 203/457 (44.42%), Query Frame = 1
Query:  223 MSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILE-CHASMQALMEALRDPREEVRNEVILLLGKLTATNH-EVKKFVAFQEGFERLFSIM---------------------------------------REEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGMRENGNREDFNDFSGVGENGADEEHFCVPLPSFQVIPLMTDLQSDIVSKAVEILLVLLEVGGGEGAEESQGQEKEQRWFTHSSNGDAGVRAVAGXXXXXXXXXXKSQSAVAGAASGLLVELLVHVAFSRAEPYCLVPLNCRRKAVRVMGAVVEGCQDNQHLVGEV 1470
            M P   A ILV+RLK AGD  DRR ALE L+ LS++ PAEVG+ GM VF+DILQ G+ D S+ Q I++IMLNLV+  G         + +   A+L  +                               A  +LE  +LE   A +Q +++ L D RE VR E +LLL  L A  H E+ + VAFQEG ERLF+IM                                        ++GM+  G  +V DCL+ C  ++  S V + LFCQS C+ VLH+L D+R L                       G   E      P     PL+  +Q DI+ +A+++L +L      +                   +G AG RA             + Q A+ GAA GLL ELL HVA SRAEPYC  P   R  A+  +  +V G  +NQ  V E+
Sbjct:    1 MDPSRQAFILVERLKAAGDPSDRRHALEQLVDLSKSSPAEVGKHGMLVFSDILQCGLVDVSLGQHIMDIMLNLVSAPGAASDANAAAVLAGGGAMLQSL------LDLLESEDAVTAVGAARAVAALHARAPAALEACLLEEIPAGVQRVVDTLLDRREAVRAEGVLLLRALAAGGHAELARVVAFQEGPERLFAIMGQVTEDMLLLLLLLPPLLLPLLLXXXXXXXXXSPLLLHGAQDGMI-AGTQLVADCLEACAAVLGASHVARALFCQSRCIGVLHQLVDIRWLAHAAR------------GAAAAGGQRGEGAGAEAP-----PLVGPVQCDIMLRALDLLRLL---AAADSTTXXXXXXXXXXXXXXXXDG-AGDRA-------------QRQLALGGAARGLLAELLAHVAISRAEPYCRAPPRVRAAALAALTEIVYGHAENQRRVLEM 416          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A4D9DEK4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEK4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.130e-24
Identity = 84/260 (32.31%), Postives = 128/260 (49.23%), Query Frame = 1
Query:  232 DAAAGILVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQA---GIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQA---LMEALRDPREEVRNEVILLLGKLTA--TNHEVKKFVAFQEGFERLFSIMREEG-MLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGMRE 984
            D A  +++DRL++A D  DR DA+E L  L +T P+ VG+  MP+  D+L+A   G  D   +Q ++E++  L++          PG+   + ++L+                                 A        L+   S Q    L+  L D REEVRNEV+L+LGKLT       +K  +AF EGFERL +++ ++G +LEGG VI  DCL +  N++ G++ TQ  FC+ G L  L    DV  ++  G  E
Sbjct:   24 DHAVAVILDRLRSARDPKDRADAVEQLQSLGKTDPSRVGRLAMPLVLDLLRARRLGQLDEGTAQGLLELLRALLSHAA-------PGVGREVLSLLLKNTGNLDALLDMAEKTDTLTTVATLQVLEAALEAGQGEVECALQGGGSQQGMVRLVACLSDEREEVRNEVLLVLGKLTTGRATENLKTLLAFNEGFERLLAMIEDDGGLLEGGSVITHDCLRLMGNVVAGTASTQRHFCELGPLETLAPWMDVTRVLAVGEEE 276          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A1B0D1B3_PHLPP (General vesicular transport factor p115 n=3 Tax=Phlebotominae TaxID=7198 RepID=A0A1B0D1B3_PHLPP)

HSP 1 Score: 108 bits (269), Expect = 3.450e-21
Identity = 79/260 (30.38%), Postives = 123/260 (47.31%), Query Frame = 1
Query:  190 LTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAH---SLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELF 948
            L   LGT   G  P  A  +  LVDR+ ++  L DRRDA  AL  LS+ +  EVG  GMP    IL+   AD  +    ++ + N+++    +     P ++ N+      M I+                             +  +    L+  +L     +  LM+ L D RE VRN+ +LLL +LT  N  ++K VAF+  F+RLF +M+EEG  +GG ++V+DCL + LNL+  +S  Q  F +   +  L  +F
Sbjct:    8 LKSVLGTPEAGQVPSGAETVEKLVDRVSSSTLLEDRRDACRALKALSKKYRIEVGAQGMPALVQILETDRADCEIIGYTLDTLCNIISPEQFDEELENPTVSVNVGEQFTEMFIKNPENVGLVLSYLEEYDFRVRWPSIKFLTSLIEYRPKELQEIVLVSPMGVSKLMDLLSDSREVVRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVMKEEGCSDGG-IVVEDCLILMLNLLKNNSSNQQFFKEGSYIQRLAPMF 266          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A6J1L949_DROHY (general vesicular transport factor p115 isoform X2 n=1 Tax=Drosophila hydei TaxID=7224 RepID=A0A6J1L949_DROHY)

HSP 1 Score: 107 bits (266), Expect = 4.600e-21
Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1
Query:  178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858
            + S +   LG+   G  P AA  +  LVDR+ ++  L DRRDA  AL  LS  +  EVG  GMP    +LQ    D  +    ++ + N+VT    +     P ++ N+      M I+                             + A+    L+  +L     +  LM+ L D RE +RN+V+LLL +LT  N  ++K VAF+  F+RLF I+REEG  +GG ++V+DCL
Sbjct:    4 LKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKSPEHVTLVMGYLDEYDFRVRRGAIQLITSLIANKTRELQELVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: UPI000E6E2476 (LOW QUALITY PROTEIN: general vesicular transport factor p115 n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E2476)

HSP 1 Score: 107 bits (267), Expect = 6.070e-21
Identity = 80/272 (29.41%), Postives = 125/272 (45.96%), Query Frame = 1
Query:  184 SSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAILMDI--QXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAH---SLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDVRVLVDTGM 978
            S L   LG    G  P  A  +  LVDR+  +  L DRRDA  AL  LS+ +  EVG  GM     +L+   ADG +    ++ ++N+ + R  E  G  P +  N+     +I  +                             ++ H    L+  IL     +  LM+ + D RE +RN++++LL  LT  N  ++K VAF+  F+RLF I+R EG  +GG ++V+DCL V LNL+  ++  Q  F +   +  L  +  +    D  M
Sbjct:    6 SGLKTVLGAAEPGDQPTGAETVERLVDRISTSTLLEDRRDACRALKALSKKYRLEVGAQGMGPLVQVLELDRADGEIVGYALDTLVNITSSRFPEEEGN-PAVTLNMGEQFTEIFIKNPDNVSLVLSYIEEYDFRIRWPAVKLLTCLSTHRPRELQDIILVSPMGVSKLMDVIGDSREVIRNDMLMLLIHLTTGNSNIQKIVAFENAFDRLFDIIRNEGCADGG-IVVEDCLIVMLNLLRNNTSNQQFFKEGSYIQKLSPMLVINSETDADM 275          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B4JMC8_DROGR (General vesicular transport factor p115 n=2 Tax=Drosophilinae TaxID=43845 RepID=B4JMC8_DROGR)

HSP 1 Score: 107 bits (266), Expect = 8.130e-21
Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1
Query:  178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858
            + S +   LG+   G  P AA  +  LVDR+ ++  L DRRDA  AL  LS  +  EVG  GMP    +LQ    D  +    ++ + N+VT    +     P ++ N+      M I+                             + A+    L+  +L     +  LM+ L D RE +RN+V+LLL +LT  N  ++K VAF+  F+RLF I+REEG  +GG ++V+DCL
Sbjct:    4 LKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKSPEHVTLVMGYLDEYDFRVRRAAIQLITSLIANKTRELQDLVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B4L819_DROMO (General vesicular transport factor p115 n=7 Tax=Drosophila TaxID=32281 RepID=B4L819_DROMO)

HSP 1 Score: 105 bits (263), Expect = 1.960e-20
Identity = 74/234 (31.62%), Postives = 111/234 (47.44%), Query Frame = 1
Query:  178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCL 858
            + S +   LG    G  P AA  +  LVDR+ ++  L DRRDA  AL  LS  +  EVG  GMP    +LQ    D  +    ++ + N+VT    +     P ++ N+      M I+                             + A+    L+  +L     +  LM+ L D RE +RN+V+LLL +LT  N  ++K VAF+  F+RLF I+REEG  +GG ++V+DCL
Sbjct:    4 LKSGIKTVLGGTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNIVTSEEFDEEADNPAVSVNVGEQFTEMFIKNPDHVTLVMGYLDEYDFRVRRGAIQLITSLIANKTRELQELVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFDIVREEGCSDGG-IVVEDCL 236          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: A0A7R8UFC0_HERIL (General vesicular transport factor p115 n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8UFC0_HERIL)

HSP 1 Score: 105 bits (263), Expect = 1.980e-20
Identity = 75/266 (28.20%), Postives = 121/266 (45.49%), Query Frame = 1
Query:  178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAA-----ILMDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHSLETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELFDV 954
            + S L   LG    G  P  A  +  LV+R+ ++  L DRRDA  AL  LS  +  EVG  GM     +LQ   AD  +    ++ +  +VT    +     P ++ N+        L + +                                  ++  +L    ++  LM+ L D RE +RN+ +LLL +LT  N  ++K VAF+  F+RLF ++R+EG  +GG +IV+DCL + LNL+  +S  Q  F +   +  L  +F +
Sbjct:    4 LKSGLKTVLGAPEPGQQPTGAETVERLVERVNSSTLLDDRRDACRALKALSRKYRIEVGAQGMSALIQVLQMDRADCEIISYALDTLCQIVTPEQFDEEADNPTVSVNVGEQFTEMFLKNSENVTLVLGYLEEYDFRVRWSAIKLLTTLLANKTKDIQEIVLVSPMAVSKLMDLLIDSREVIRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVVRDEGCSDGG-IIVEDCLILMLNLLKNNSSNQQFFKEGSYIQRLAPMFTI 268          
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Match: B0WXD3_CULQU (General vesicular transport factor p115 n=6 Tax=Culex TaxID=53527 RepID=B0WXD3_CULQU)

HSP 1 Score: 105 bits (263), Expect = 1.990e-20
Identity = 75/264 (28.41%), Postives = 125/264 (47.35%), Query Frame = 1
Query:  178 MSSSLTHYLGTEAEGMSPDAAAGI--LVDRLKNAGDLGDRRDALEALLGLSETHPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGGPGIASNIAAIL--MDIQXXXXXXXXXXXXXXXXXXXXXXXXXXXQGVAAHS---LETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQEGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCLNVLHELF 948
            + S L   LGT+  G +P  A  +  LV+R+ ++  L DRRDA  AL  LS+ +  EVG  GMP    +++   AD  +    ++ + ++ +    E     P +  NI      M I+                             + A+    ++  +L     +  LM+ L D RE +RN+ +LLL +LT  N  ++K VAF+  F+RLF +++EEG  +GG ++V+DCL + LNL+  +   Q  F +   +  L  +F
Sbjct:    4 LKSGLQTVLGTQEPGTAPSGAETVERLVERVSSSTLLDDRRDACRALKALSKKYRVEVGAQGMPALLQVMEMDRADAEIVGYCLDTLCHVTSPEQFEEESENPTVTVNIGEQFTEMFIKASENVGLVLNCLEEYDFRVRWSAIKLLTSLLANKPKEIQEIVLVSPMGVSKLMDLLIDSREVIRNDALLLLIQLTKGNANIQKIVAFENAFDRLFDVIKEEGCSDGG-IVVEDCLILMLNLLKNNPSNQQFFKEGSYIQRLAPMF 266          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7543.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5A9_ECTSI1.950e-9252.68Vesicle docking protein P115 n=2 Tax=Ectocarpus Ta... [more]
A0A836C866_9STRA3.090e-4332.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEK4_9STRA5.130e-2432.31Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1B0D1B3_PHLPP3.450e-2130.38General vesicular transport factor p115 n=3 Tax=Ph... [more]
A0A6J1L949_DROHY4.600e-2131.62general vesicular transport factor p115 isoform X2... [more]
UPI000E6E24766.070e-2129.41LOW QUALITY PROTEIN: general vesicular transport f... [more]
B4JMC8_DROGR8.130e-2131.62General vesicular transport factor p115 n=2 Tax=Dr... [more]
B4L819_DROMO1.960e-2031.62General vesicular transport factor p115 n=7 Tax=Dr... [more]
A0A7R8UFC0_HERIL1.980e-2028.20General vesicular transport factor p115 n=1 Tax=He... [more]
B0WXD3_CULQU1.990e-2028.41General vesicular transport factor p115 n=6 Tax=Cu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7543contigC-tenellus_contig7543:1473..5114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5A9
Preferred nameUSO1
PFAMsUso1_p115_C,Uso1_p115_head
Model size1476
Max annot lvl2759|Eukaryota
KEGG koko:K11675,ko:K20361,ko:K20478
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0001650,GO:0002009,GO:0002165,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007030,GO:0007275,GO:0007346,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008104,GO:0008150,GO:0008565,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010256,GO:0010389,GO:0010564,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0019898,GO:0022406,GO:0022607,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031312,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033036,GO:0034613,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042802,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044719,GO:0045056,GO:0045184,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048211,GO:0048219,GO:0048278,GO:0048471,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051726,GO:0060429,GO:0060562,GO:0061024,GO:0061025,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090066,GO:0090114,GO:0090498,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:0140056,GO:1901987,GO:1901990,GO:1902749
Exons5
Evalue4.77e-94
EggNOG OGsKOG0946@1|root,KOG0946@2759|Eukaryota
DescriptionGolgi vesicle docking
Cds size1299
COG categoryO
BRITEko00000,ko03036,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7543.1.1prot_C-tenellus_contig7543.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7543 1650..5114 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790043.53536-UTR-C-tenellus_contig7543:1472..16491680790043.53536-UTR-C-tenellus_contig7543:1472..1649Choristocarpus tenellus KU2346UTRC-tenellus_contig7543 1473..1649 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790043.5481243-CDS-C-tenellus_contig7543:1649..20601680790043.5481243-CDS-C-tenellus_contig7543:1649..2060Choristocarpus tenellus KU2346CDSC-tenellus_contig7543 1650..2060 +
1680790043.5573964-CDS-C-tenellus_contig7543:2306..24501680790043.5573964-CDS-C-tenellus_contig7543:2306..2450Choristocarpus tenellus KU2346CDSC-tenellus_contig7543 2307..2450 +
1680790043.5668304-CDS-C-tenellus_contig7543:3015..31831680790043.5668304-CDS-C-tenellus_contig7543:3015..3183Choristocarpus tenellus KU2346CDSC-tenellus_contig7543 3016..3183 +
1680790043.5767365-CDS-C-tenellus_contig7543:3549..36961680790043.5767365-CDS-C-tenellus_contig7543:3549..3696Choristocarpus tenellus KU2346CDSC-tenellus_contig7543 3550..3696 +
1680790043.5858006-CDS-C-tenellus_contig7543:4685..51141680790043.5858006-CDS-C-tenellus_contig7543:4685..5114Choristocarpus tenellus KU2346CDSC-tenellus_contig7543 4686..5114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7543.1.1

>prot_C-tenellus_contig7543.1.1 ID=prot_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=433bp
MSSSLTHYLGTEAEGMSPDAAAGILVDRLKNAGDLGDRRDALEALLGLSE
THPAEVGQAGMPVFTDILQAGIADGSMSQTIIEIMLNLVTGRGVEGTGGG
PGIASNIAAILMDIQNVQNLLDLLESPDTLTALSAVQVLQELQGVAAHSL
ETSILECHASMQALMEALRDPREEVRNEVILLLGKLTATNHEVKKFVAFQ
EGFERLFSIMREEGMLEGGGVIVKDCLDVCLNLMMGSSVTQLLFCQSGCL
NVLHELFDVRVLVDTGMRENGNREDFNDFSGVGENGADEEHFCVPLPSFQ
VIPLMTDLQSDIVSKAVEILLVLLEVGGGEGAEESQGQEKEQRWFTHSSN
GDAGVRAVAGGGGGGGGHREKSQSAVAGAASGLLVELLVHVAFSRAEPYC
LVPLNCRRKAVRVMGAVVEGCQDNQHLVGEVC*
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mRNA from alignment at C-tenellus_contig7543:1473..5114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7543.1.1 ID=mRNA_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3642bp|location=Sequence derived from alignment at C-tenellus_contig7543:1473..5114+ (Choristocarpus tenellus KU2346)
AAGCAAGAGCATCTTTTGTCTTGTTCTCGACAAAGCAGGCCCTCCCTGCT GGGGCGCTGCTGCTCTCTAGCAACTGCAACGTATCGTTATCGTTATCCTA CGTATAATCCAAGGGTTCGTACTCTATGCCGGGGTATTGGGTTCTTTGTC CTGTCGTCGACTGACCTATCTTGAGATATGTCTTCTAGCCTAACCCACTA CCTCGGGACAGAGGCCGAGGGAATGAGTCCTGATGCTGCAGCAGGAATAC TCGTGGACAGACTGAAGAATGCTGGGGATCTGGGTGATCGACGTGACGCC CTTGAGGCTCTATTGGGTCTCTCAGAGACGCACCCTGCTGAGGTTGGTCA GGCGGGCATGCCCGTCTTCACTGACATACTTCAGGCTGGCATTGCCGACG GTTCTATGTCGCAGACCATAATCGAAATCATGCTCAACCTTGTGACAGGG CGGGGGGTAGAGGGTACAGGAGGGGGTCCAGGGATCGCAAGCAATATTGC TGCCATCCTCATGGACATCCAGAACGTGCAGAATCTACTTGACTTGCTGG AGAGTCCAGACACCCTCACAGCTCTGTCCGCTGTGCAGGTAAATATCGCA TTTGACTATCGGCCAATTTCTGAGTGCAACAATTGGAAACGATATAATCA AGCTCCGGTAGGTGGATTTGTTTGATCTGTTTGTCACACAGCCCAGCATA CGCCCAAACCGAAATACCTCAACGAACTTTCAACCCCCCATTTACTGGAC CGCACTTTGTCTACCACCCACTGACATTGTTCCCTGCCTTCGCTCCTCGG GAACGTCCCTGGGGGAATCGATCGGTGCATGAAGGTACTGCAGGAGTTAC AGGGCGTAGCTGCTCACTCATTGGAGACATCGATTCTGGAGTGCCATGCC AGTATGCAGGCATTGATGGAGGCGCTGAGGGACCCGAGGGAAGAAGTGCG GAATGAAGTAATCTTACTATTGGGAAAGGTGGGTGTGTAGGACCGTTGTT CAGTTCTTTTCCGGACCAAGACGATACCTGACCATTCTAGGATCAGACTC AAAGAGTATTCTTTCCCTAGCATGATTCCATGTCTGCAAGATACGACATT TCCACGGTGCACCACGGTTTTCTTGGGAAAATGTGGCTGATTGATGGGGA AGCAAAGTATGCTTGGGTGAGTCCAAGGGGGGGGTTCTAGGTCCGAATGG TAGGGGTGATGGGCTCTCCAAGTCAAGCTGTGTCCGACTGGAGAACAGGC TGCGGTGCAGTGTGAAACACTATCCTGGAGTTGTGGGTGGAGCCCAAATA ATGCCAAACCTTGCCAGAATCGCCAGTTTCAGTCCCTGCCCCTTGAGCTG ACCATAAGCCCAGCCCCTCATCCCAACCCTAATCCTCATGCTCCCTCTGA CCCTGGCCCTGACCTGGGCCTGCCTTGCCTGTCTCATCTATACTTAAACC ATCAGTTTCCCATCTTACCCTGCTACATTTTCTGTGCGTACGTCATGTAT CTATTTTTTGTGTATATATCTGCGTAAATTTTCCTTGGCATAGTTGACAG CAACAAACCACGAGGTGAAAAAATTTGTGGCATTTCAGGAGGGCTTTGAG CGGCTCTTTTCCATTATGAGGGAAGAGGGCATGCTGGAGGGTGGAGGGGT GATCGTCAAAGACTGCTTGGACGTGTGTCTTAATCTTATGATGGGGTCTT CGGTTACACAGGTGAAAACCATGTGTTGCCACAGGAACTATGCATGATGC TATGTTATGGTATGAGTATGATTCTGTTTCGAAGTGTCATTAGTGTGGGT GCATCTAGACACCTCAACGCATGCAGAAATGACCTCTATTTGTTGCTATG CGTCAAAGTATGAGGTGATTAATCTGCAGTTGTTAATATCTCTCGTAAGG GCATGTTTTCACCTCCACAGAGCATGCGTCATACTTGCCAACCTCCTGGC CGTATGCATATCAACCCTACGAAACCCACCAGATCCATGTTGATGATCCA GCCCTACCCTGTAATTATTCTGTCTCTATAGTGACCCTTTCAATTTTGGA CGATAAATATATCTATCTTGCCTGTAGCTTCTCTTTTGTCAGAGTGGCTG TCTTAATGTGCTCCATGAGCTGTTCGATGTGCGAGTGTTGGTTGATACGG GAATGAGGGAGAATGGAAACAGGGAGGATTTCAATGACTTCTCAGGCGTT GGAGAGAATGGTGCCGATGAGGAGGTATGTCTTGATGTTGGGCAGTGCAG AGCTTTTAGGGTGAGGTCCTAGGGAATTGAAGATATAGCCAGTGTCCTGT GTAGCATAAATGCACTTGGTAGAGGCAGATGAGGTGCTAGTTGGTGTGCA CCCCAATCAACAATGAGGTTTAATGGGGGTTGTTTTTGAGCCACACTCTC TAGGATTAAGGTTAGAGTTCCTACTCATGTCTGTTCAGTCACACTATAGG ATGGGACAAGTGGATTTAGGTTTGAGACCATTCCATCGAACAGGATGGCA ATAGAGACAAGTCACTGATTACCATTGTGGCAGGAGCTTCGTACCCCTTC CCCCCTCTCCCTCCCACTGTCATTAGTTGATGCGTGTTTTGAGAGAATGC ATACCTGACCACAATCACCTCTCTCAACCCAAGCCTTGATTAACCCCAGG CATGCCTTGAAATGTCCCCTAAATTTAGACTACACGCTCTGAGGACAGCA TGCTTCTTGAACCTCCTATGCAAGGATCAAAAGTCCTTTTGATGGTCTAT TCTATTTGCTGGTGTCGCCTAAAAATTGCAAAAAAAAGGGATGAACATGT CTTGAATCAGGGGCTGCTGCAGTTGTATAGTACAGATGCCCTAAAATGAT AGAAGATGTATTAATCGATTTTGTAGAGGGTTTGAACACATTTTTGATGC GACATATGATGCAAGAGAAGCACTGCTAGAAAGGAGTACCGCCACAGGTG TTTATCAGAGAGCAGGGACTGTGCTGTACGAAATGTGTTAGAAAAAACTA TTATTTTTCCTGTTTTCACTTGAACCAATTCAATCAAATATCGTTCACGC ATACTTCATGGAAGATGTGGAATGCCTGAAGATATAGACAATATTTAGCT CAATTATTGATATTGGGACATGAAATATAACCCCTGACTTTACTCTTGCC TCCCCCCCCCTCCCTTTTGTCCTCCAACATCCAATGACAATTCTCCATAC TAGTATTCATCAGCACTTCTGTGTACCCTTGCCATCCTTCCAGGTGATCC CCCTGATGACAGACCTGCAGTCTGATATCGTCTCCAAGGCTGTAGAAATC CTTTTGGTCCTCCTTGAGGTAGGTGGTGGAGAGGGGGCTGAAGAGTCTCA GGGGCAAGAAAAGGAACAGCGCTGGTTCACCCACAGCTCCAATGGAGATG CTGGTGTAAGGGCTGTTGCTGGGGGTGGGGGTGGGGGTGGGGGGCACAGG GAAAAGAGCCAGTCTGCTGTTGCAGGTGCAGCATCTGGGCTCCTGGTGGA GCTTTTGGTGCATGTCGCCTTTTCTCGGGCTGAGCCGTATTGTCTAGTGC CACTCAATTGCCGGCGGAAGGCAGTCAGGGTGATGGGGGCTGTGGTGGAA GGATGCCAGGATAATCAGCATCTTGTGGGAGAGGTTTGTTAA
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Coding sequence (CDS) from alignment at C-tenellus_contig7543:1473..5114+

>mRNA_C-tenellus_contig7543.1.1 ID=mRNA_C-tenellus_contig7543.1.1|Name=mRNA_C-tenellus_contig7543.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1299bp|location=Sequence derived from alignment at C-tenellus_contig7543:1473..5114+ (Choristocarpus tenellus KU2346)
ATGTCTTCTAGCCTAACCCACTACCTCGGGACAGAGGCCGAGGGAATGAG
TCCTGATGCTGCAGCAGGAATACTCGTGGACAGACTGAAGAATGCTGGGG
ATCTGGGTGATCGACGTGACGCCCTTGAGGCTCTATTGGGTCTCTCAGAG
ACGCACCCTGCTGAGGTTGGTCAGGCGGGCATGCCCGTCTTCACTGACAT
ACTTCAGGCTGGCATTGCCGACGGTTCTATGTCGCAGACCATAATCGAAA
TCATGCTCAACCTTGTGACAGGGCGGGGGGTAGAGGGTACAGGAGGGGGT
CCAGGGATCGCAAGCAATATTGCTGCCATCCTCATGGACATCCAGAACGT
GCAGAATCTACTTGACTTGCTGGAGAGTCCAGACACCCTCACAGCTCTGT
CCGCTGTGCAGGTACTGCAGGAGTTACAGGGCGTAGCTGCTCACTCATTG
GAGACATCGATTCTGGAGTGCCATGCCAGTATGCAGGCATTGATGGAGGC
GCTGAGGGACCCGAGGGAAGAAGTGCGGAATGAAGTAATCTTACTATTGG
GAAAGTTGACAGCAACAAACCACGAGGTGAAAAAATTTGTGGCATTTCAG
GAGGGCTTTGAGCGGCTCTTTTCCATTATGAGGGAAGAGGGCATGCTGGA
GGGTGGAGGGGTGATCGTCAAAGACTGCTTGGACGTGTGTCTTAATCTTA
TGATGGGGTCTTCGGTTACACAGCTTCTCTTTTGTCAGAGTGGCTGTCTT
AATGTGCTCCATGAGCTGTTCGATGTGCGAGTGTTGGTTGATACGGGAAT
GAGGGAGAATGGAAACAGGGAGGATTTCAATGACTTCTCAGGCGTTGGAG
AGAATGGTGCCGATGAGGAGCACTTCTGTGTACCCTTGCCATCCTTCCAG
GTGATCCCCCTGATGACAGACCTGCAGTCTGATATCGTCTCCAAGGCTGT
AGAAATCCTTTTGGTCCTCCTTGAGGTAGGTGGTGGAGAGGGGGCTGAAG
AGTCTCAGGGGCAAGAAAAGGAACAGCGCTGGTTCACCCACAGCTCCAAT
GGAGATGCTGGTGTAAGGGCTGTTGCTGGGGGTGGGGGTGGGGGTGGGGG
GCACAGGGAAAAGAGCCAGTCTGCTGTTGCAGGTGCAGCATCTGGGCTCC
TGGTGGAGCTTTTGGTGCATGTCGCCTTTTCTCGGGCTGAGCCGTATTGT
CTAGTGCCACTCAATTGCCGGCGGAAGGCAGTCAGGGTGATGGGGGCTGT
GGTGGAAGGATGCCAGGATAATCAGCATCTTGTGGGAGAGGTTTGTTAA
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