mRNA_C-tenellus_contig7526.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 8.230e-45 Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLRIEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLFSMV--GFSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHIYH 456 Q TKITDV+ QA+HEG+DLL VPL GG P Y T+ AL+PLR++AL FGDLHL++++ WR+D FS YPC FPLF VPY +LL RL+ + G +++V+SV +G+ G+ VG Y V+ L + +D MGENGEFHTH+YH Sbjct: 159 QDTKITDVLEQARHEGVDLLAVPLGGGSGPFP-DAYSVTLKAALKPLRVKALAFGDLHLQELKSWRQDVFSGAYPCEFPLFEVPYEELLSRLWEEIAAGVTLKVSSVSTDHKGLEGISVGDVYCEAFVKRLP---DIVDAMGENGEFHTHVYH 307
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.030e-43 Identity = 83/154 (53.90%), Postives = 101/154 (65.58%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPL--RIEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLFSMVG---FSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHI 450 Q+T I DVM QAK +DLL VPLKGGEA+T GPYV V+ AL P RI AL FGDLHL DIR WRE TF+ YPCRFPLF PY +L RL++ S+ V++VR+ L G L++G Y+ V L +G+D MGENGEFHTH+ Sbjct: 151 QNTNIRDVMDQAKALQVDLLAVPLKGGEASTGAGPYVDAVMAALEPFKQRIRALCFGDLHLVDIRAWREATFTDTYPCRFPLFNTPYAELKARLWAEAERGTISVTVSAVRDDLLEQGPLRIGAQYDAAFVGALP---QGVDEMGENGEFHTHV 301
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: A0A6I7QBU6_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7QBU6_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 2.900e-18 Identity = 59/153 (38.56%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLRIEALYFGDLHLEDIRGWREDTFSKI-YPCRFPLFGVPYNDLLGRLFSMVGFSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHIYHD 459 Q+ I V QA GL L VPL + ++ + L P I L FGDLHLEDIR WRE+ FS++ Y CRFP++ PY +L RL SI+V+ V +G +K G + + L + ID MGE GEFHT + D Sbjct: 52 QNIPIRRVQNQAMKLGLILYTVPLSYPSSNEQYLKTLSKSFEQL-PFSIHHLIFGDLHLEDIRKWREEQFSEMGYKCRFPIWKKPYEELFDRL-EEENVSIKVSGVMSEYDGY--IKPGDLFTREYAHSLP---KQIDRMGEKGEFHTEVIFD 197
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: UPI001BFE4E2C (DUF5522 domain-containing protein n=1 Tax=unclassified Polynucleobacter TaxID=2640945 RepID=UPI001BFE4E2C) HSP 1 Score: 89.0 bits (219), Expect = 3.440e-18 Identity = 61/163 (37.42%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLR------IEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLFSMV-GFSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHIYHDEYVV 471 Q I ++ Q++ + L +VPL P Y + +AL ++ IE L FGDLHLEDIR WR DT+S+ Y PLFG PY +LL RL+ G ++ +T + G L G PY +LV L+ IDIM ENGE HT +Y ++ Sbjct: 121 QDIHIKNIAKQSEFLKIPLCLVPLY------PNSDYKKAIEEALVMVQDRTSCSIERLVFGDLHLEDIRKWRVDTWSE-YEVFTPLFGTPYKELLSRLWEYRRGMNLSITLSTDVKTVNGVLPTGTPYTPELVTELEKS--NIDIMLENGEGHTFVYPSNWIA 274
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: UPI000D3C1BF8 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter difficilis TaxID=556054 RepID=UPI000D3C1BF8) HSP 1 Score: 86.7 bits (213), Expect = 2.520e-17 Identity = 58/163 (35.58%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLR------IEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLFSMVG-FSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHIYHDEYVV 471 Q I ++ Q++ L + PL P Y + + +AL ++ IE L FGDLHLEDIR WR DT+S+ Y PLFG Y +LL +L+ + +T E G L G PY +L+ LK GID+M ENGE HT +Y ++ Sbjct: 121 QDIHIKNIAKQSEFLKTPLCLAPLH------PNSDYKSAIKEALNMIQDRTSNSIERLVFGDLHLEDIRKWRVDTWSE-YEVSTPLFGTHYEELLAKLWEYKKEMDLSITLSTEVKTPNGFLPTGTPYTPELIVELKK--HGIDVMLENGEGHTFVYPSNWIA 274
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: A0A1Y2C0D4_9FUNG (Diphthine--ammonia ligase (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0D4_9FUNG) HSP 1 Score: 87.8 bits (216), Expect = 3.130e-17 Identity = 65/178 (36.52%), Postives = 89/178 (50.00%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLR-------------IEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYN-DLLGRLFSM-------VGFSIRVTSVR------EGLE--GVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHI 450 Q+ I D+ Q+ L LL+VP +G ++ Y+ T+ DAL L I+ L FGDL LEDIR WRE +FS +YPCRFPLF + + +L+ RL+ + + FS V EGLE G ++ Y LVE E +D+MGE GEFHT + Sbjct: 216 QNISIGDISAQSSCLNLPLLLVP-RGADSKNET--YIKTITDALEQLSREMSALDSSKSSTIQYLVFGDLFLEDIRAWRESSFSNLYPCRFPLFELDFQKNLMPRLWELCEEYEIRISFSAMENEVMKKWVNDEGLEKDDEGNVR----YTKSLVE-RSDFPETVDLMGERGEFHTKV 385
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: UPI001C0C0339 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter sp. AP-Latsch-80-C2 TaxID=2576931 RepID=UPI001C0C0339) HSP 1 Score: 80.9 bits (198), Expect = 3.490e-15 Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPL------RIEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLFSMVG-FSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHTHIY 453 Q+ I ++ Q++ L L +VPL P Y ++ +AL+ + +IE L FGDLHL+ IR WR DT+ + Y PLF +PY LL RL+ + + +T E L +G PY LVE LK +D M ENGE HT ++ Sbjct: 121 QNIHIKNIAKQSEFLKLPLCLVPL------APNTDYKASIQEALQMIIAQTGAKIERLVFGDLHLQSIRQWRVDTWPE-YEIATPLFDLPYEGLLNRLWQLQKEMDLSITLSTELSLAKETLAIGTPYTQLLVEQLKEN--NVDAMLENGEAHTLVF 268
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: G5ADK1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ADK1_PHYSP) HSP 1 Score: 82.0 bits (201), Expect = 6.180e-15 Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 148 IEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYND----LLGRLFSMVGFSIRVTSVRE---GLEGVGG-LKVGHPYNHDLVEVL-KAGVEG---IDIMGENGEFHTHIYHDEYVVGLGESSSDEEDTSE 513 + +L FGDLHL+DIR WRE TFS+ Y RFP++ Y L RL S G I ++S+ + +G+G +VG Y+ +LV+ KA VE +D+MGE GEFHT Y ++ G S + TSE Sbjct: 584 VSSLVFGDLHLDDIRAWREQTFSQDYKLRFPVWKKDYESELLPSLERLCSKTGAKIYLSSIDKDQLASKGIGADWQVGQEYDWELVQKCNKAAVEDAKRVDLMGECGEFHTQYYPMQHFSSSGISRFAKTPTSE 717
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: A0A7S3PJ45_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJ45_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.840e-14 Identity = 57/160 (35.62%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 1 KQSTKITDVMLQAKHEGLDL--LVVPLKGGEATTPMGPYVTTVLDALRPLRIE--------ALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYNDLLGRLF--SMVGFSIRVTSVREGLEGVGGLKVGHPYNHDLVEVLKAGVEGIDIMGENGEFHT 444 +Q+ + T+ Q K GLDL + PL P Y+ T+ LR + E L FGDLHL DI+ WRED FS+ Y C FP+F Y++L LF S++ + I V++V + L VG ++ + + L ID GE GEFHT Sbjct: 40 EQNIRFTEATDQVKALGLDLDLMACPLP---PNCPNTVYIDTISKVLRDISSEYQIPKIGMQLVFGDLHLADIKKWREDMFSE-YKCIFPIFNQQYSELCSLLFGSSLLDY-IEVSNVTVKSDF---LTVGMTFDKSVYDKLTDSAADIDPFGELGEFHT 191
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Match: A0A662XXU6_9STRA (Diphthine--ammonia ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXU6_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.030e-13 Identity = 57/178 (32.02%), Postives = 82/178 (46.07%), Query Frame = 1 Query: 4 QSTKITDVMLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPL---------------------RIEALYFGDLHLEDIRGWREDTFSKIYPCRFPLFGVPYND----LLGRLFSMVGFSIRVTSV---REGLEGVGGLKVGHPYNHDLVEVLKA-GVEGIDIMGENGEFHTHI 450 Q+ ++ ++ QA+ L L +V + G+A Y + V ALR L I AL FGDLHL+DIR WRE TF+K + RFP++ Y L RL G I +++ R G ++G Y+ VE + +D+MGENGEFHT + Sbjct: 544 QNIEVQTIVAQAEALELPLCLVAVGLGDA------YTSAVQSALRDLPEQMARIRKSKKTPKNLDPTPAIAALAFGDLHLQDIRNWREQTFAKQFTLRFPVWQKDYRTELLPALSRLCVKTGAKIYFSNIDTDRVGSSSEAAWQLGQEYDWKQVEARNEHSDQPVDLMGENGEFHTCV 715 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7526.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7526.2.1 >prot_C-tenellus_contig7526.2.1 ID=prot_C-tenellus_contig7526.2.1|Name=mRNA_C-tenellus_contig7526.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=166bp MLQAKHEGLDLLVVPLKGGEATTPMGPYVTTVLDALRPLRIEALYFGDLHback to top mRNA from alignment at C-tenellus_contig7526:4795..5319- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7526.2.1 ID=mRNA_C-tenellus_contig7526.2.1|Name=mRNA_C-tenellus_contig7526.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=525bp|location=Sequence derived from alignment at C-tenellus_contig7526:4795..5319- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7526:4795..5319- >mRNA_C-tenellus_contig7526.2.1 ID=mRNA_C-tenellus_contig7526.2.1|Name=mRNA_C-tenellus_contig7526.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=498bp|location=Sequence derived from alignment at C-tenellus_contig7526:4795..5319- (Choristocarpus tenellus KU2346)back to top |