mRNA_C-tenellus_contig7525.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7525.2.1
Unique NamemRNA_C-tenellus_contig7525.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 2.360e-146
Identity = 210/319 (65.83%), Postives = 257/319 (80.56%), Query Frame = 1
Query:   10 DLRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGSIVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKIDELL 966
            DLRGK+ +VTGANTG+GY   RE+AKMGA VT+ACRSAERGQ A+DK++AEALEKPVKEGV L   LTDVDV +EVLDLGS  S+I F+QR KASG  +D+L+NNAG+MAIP+RRETVDG+EM +GVNHFG HLLTRL+E  M DGG ++FLSSLGH QPPGQAK  + +D++N EKP  Y+ WM+YG+SKL NILDAKEF+KRL  RGI+TYA +PG+VNT+L R MTD SL SR+TRL  P+   +L TPL G+ T ++CA+DP+L   E SGKYW + KE  PSELA DPAN PRLW+ TE ++EAKL K +D+LL
Sbjct:   17 DLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 1.720e-125
Identity = 191/323 (59.13%), Postives = 244/323 (75.54%), Query Frame = 1
Query:    1 LNVDLRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGSIVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCM-LKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKIDELL 966
            L  DLRGK+ IVTGANTG+GYV ARE+AKMGAKVT+ACRSAERGQ A+DK++AEALEKPVKEGV L   LT+VDV +EVLDLGS  S++ F+QR KASG  +D+L+NNAG+  +P+RRET DG+EM +GVNHFG HLLTRL+E +M DGG ++FLSSL H++PPG  KT   WD++N +KP  Y +  +Y +SKL NI DAKEF+KRLA R I TYAV PG+V T++ R +  G L   +        G + LK PL G+ T ++CA+DP+L   ELSGKYW + KE  PSELA DPAN PRLW+ TE ++E KL K++D+++
Sbjct:  163 LRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 3.850e-124
Identity = 189/322 (58.70%), Postives = 239/322 (74.22%), Query Frame = 1
Query:    1 LNVDLRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGSIVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCM-LKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKIDEL 963
            L  DLRGK+ IVTGANTG+GYV ARE+AKMGAKVT+ACRSAERGQ A+DKL+AE LEKP KEGV L   LT+VDV +EVLDLGS  S+I F+Q  KASG  +D+L+NNAG+  +P+RRET DG+EM +GVNHFG HLLTRL+E ++ DGG ++FLSSL H++PPG  KT   WD++N +KP  Y +  +Y +SKL NI DAKEF+KRLA R I TYAV PG+V T++ R +  G L   +        G + LK PL G+ T ++CA+DP L   ELSGKYW + KE  PSELA DPAN PRLW+ TE ++E KL K++D++
Sbjct:   16 LRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDV 337          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.830e-69
Identity = 115/211 (54.50%), Postives = 146/211 (69.19%), Query Frame = 1
Query:  334 MAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGSIVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKIDELL 966
            MAIP    TVDG+E  +GVNHFG HLLTRL+E  + DGG +VFLSS+ H            WD++N  KP  Y   ++YG+SKL N+LDAK F+  L+ R I TYA++PG+VNTDL R +TDG L SR+ R+ K +   +L +PL GS T L+CA+DPAL   E SGKYWS  K+ +PS LASDPAN PRLW+ TEE++E KL KKI+ LL
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGG------WDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLL 205          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 224 bits (571), Expect = 5.370e-65
Identity = 142/325 (43.69%), Postives = 187/325 (57.54%), Query Frame = 1
Query:   22 KNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMR--DGGSIVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKIDELLA*GSGADG 990
            K V++TGANTG+G   AR++AK G ++ MACR+ E+G+A     R E +E+   E           DV V+ LDL SF SI +F+++   +   +DIL+NNAG+MA P +  T DG+EM +G NHFG  LLT LL   ++      IV LSS+ HA         + WDDIN++K   Y  W +YGQSKL NIL   E S RL   G+T  +V+PG VNTDL R+   G     + +LLKP+     KTP+ G+ T L CAL P L   E+SGKY+ D KE  PS      A+  RLW+ TEEII+ KL        A G GA G
Sbjct:   14 KTVLITGANTGLGKETARDLAKRGGRIIMACRNLEKGEAT----RKEIVEETKNE-----------DVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACP-KTLTKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHAFAS------IKWDDINSDKK--YGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRG-----IFKLLKPLSKLFFKTPVDGAQTTLYCALSPDL--EEVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKLSG------AGGPGASG 301          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: UPI001F03DF24 (retinol dehydrogenase 13-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03DF24)

HSP 1 Score: 200 bits (508), Expect = 8.260e-56
Identity = 119/314 (37.90%), Postives = 187/314 (59.55%), Query Frame = 1
Query:   13 LRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGS--IVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHK 948
            ++GK VI+TGANTG+G   A  +A  GA++ MACRS ERGQAAL+ +  +                   D+ ++ LDL SF S+  F++ + +S + ID+L+NNAGL++  +R+ + DG+E+T+ VNHFG  LLT LL   +R      IV +SS  H       K+ +  DD+  EK  +Y++W +YGQSKL NIL  +E +KRL   G+T  +++PG++ T+L+RY    +L+  + + L  I   ++KT  +G+ T +  A+   +  A ++GKY+ D +ETKP+  A D     RLW+ +EEI++    K
Sbjct:   36 MKGKTVIITGANTGIGKSTAINLASRGARIIMACRSLERGQAALNDIVKQTGNN---------------DIILKHLDLSSFKSVRKFAEEIYSSENKIDVLINNAGLVSTTERQVSKDGLELTMAVNHFGHFLLTNLLLDLLRRSAPSRIVVVSSGAHYSIA-NTKSHIKLDDLQFEK--SYNEWEAYGQSKLANILFTRELAKRLKGTGVTANSLHPGVIFTELSRY----ALSENVNKFLNFISPVVMKTLEEGAQTTIHLAVSEDV--ANVTGKYFVDCEETKPAHTAEDDDGAKRLWEISEEIVQLSAQK 325          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: A0A6A4VL08_AMPAM (Retinol dehydrogenase 12 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VL08_AMPAM)

HSP 1 Score: 193 bits (491), Expect = 5.670e-53
Identity = 132/313 (42.17%), Postives = 178/313 (56.87%), Query Frame = 1
Query:   13 LRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLL-ESTMRDGGS-IVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLH 945
            L G   ++TGANTG+G   AR + + GA+V +  RS ERG+ A    R+E +E    E        T   + V  LDL S  S+ DF+Q V A  D I++L+NNAG+MA P R ET +G EM +GVNH G  LLT LL E  +    S IV LSSL H +        M +DD+  ++   Y  W +Y QSKL N+L  +E ++RL    +TTYAV+PG+V TDL R+           RLL+P    M KTP +G+ T L CAL P L T  LSG+Y+SD KE +PS  A +  +  RLW+ +EE++   L 
Sbjct:   13 LEGTTAVITGANTGVGKETARHLYRRGARVIIGVRSVERGEEA----RSEIVESAAGE------QETAGALIVLQLDLASLQSVRDFAQEVLAQADKINLLINNAGVMACP-RAETKEGFEMQLGVNHLGHFLLTLLLLERLVNSAPSRIVNLSSLAHTRGK------MHFDDLMLKR--GYGDWKAYYQSKLANVLFTRELARRLLGTRVTTYAVHPGIVRTDLWRHQ------GCFDRLLQP----MFKTPEQGAQTTLYCALAPELAT--LSGRYYSDCKEKQPSARARNDEDAARLWEISEELVGVGLQ 294          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: A0A7R9X9Q0_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9X9Q0_9CRUS)

HSP 1 Score: 193 bits (491), Expect = 7.370e-53
Identity = 125/315 (39.68%), Postives = 174/315 (55.24%), Query Frame = 1
Query:   13 LRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGS--IVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKK 951
            L GK VIVTG NTG+G    R++ K GAK+ MACR   + + A  ++R    ++                + V  LDL S +S+  FS ++      I IL+NNAG+M  P+ R T DG EM  GVNH G  LLT LL   +++     IV +SS  H          M +DDIN  K  +Y  W +Y QSKL NIL +KE +K+L   G+TTY ++PG+V+T+L RYM++      + R+L+      L TP KG+ T + CA+D AL     SGKY+ D +ET+PS  A D  +  RLWK + E++  KL  K
Sbjct:   80 LDGKTVIVTGCNTGIGKETCRDLIKRGAKLIMACRDVTKAEKAAAEIRQTKTDE----------------IIVRHLDLTSLDSVRSFSSQILKEEPKIHILINNAGIMMHPEDR-TKDGFEMHFGVNHLGHFLLTLLLLDRLKESAPARIVTVSSAAHEGGE------MDFDDINLSK--SYKPWKAYSQSKLANILFSKELAKQLHGTGVTTYCLHPGVVDTELGRYMSESG-NKTIVRILQFFSSLFLDTPAKGAQTTIYCAVDEAL--ENTSGKYYLDCRETEPSSRARDEEDSKRLWKLSLEMV--KLESK 364          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: UPI001F03F637 (uncharacterized protein LOC124454779 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03F637)

HSP 1 Score: 203 bits (516), Expect = 1.780e-52
Identity = 119/309 (38.51%), Postives = 187/309 (60.52%), Query Frame = 1
Query:   13 LRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGS--IVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIE 933
            ++GK VI+TGANTG+G   A ++A  GA++ MACRS ERGQAAL+ +  +                   D+ ++ LDL SF S+  F+Q++ +S D ID+L+NNAGL++  +R+ + DG+E+T+ VNHFG  LLT LL   +R      IV +SS+ H       K+ +  DD+  EK  +Y++W +YGQSKL NIL  +E +KRL   G+T  +++PG++ T++ RY    +L+  + + L  I   + KT  +G+ T +  A+   +  A ++GKY+ D +ETKP+  A D     RLW+ +EEI++
Sbjct:  701 MKGKTVIITGANTGIGKSTAIDLASRGARIIMACRSLERGQAALNDIVKQTGNN---------------DIILKHLDLSSFKSVRKFAQKIYSSEDKIDVLINNAGLVSTTERQVSKDGLELTMAVNHFGHFLLTNLLLDLLRRSAPSRIVVVSSIAHYSIA-YTKSHIKLDDLQFEK--SYNKWEAYGQSKLANILFTRELAKRLKGTGVTANSLHPGIIFTEIGRY----ALSENVNKFLNFISNVLFKTLEEGAQTTIHLAVSEDV--ANVTGKYFVDCEETKPAHTAEDDDGAKRLWEISEEIVQ 985          
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Match: A0A553N7Y6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N7Y6_TIGCA)

HSP 1 Score: 191 bits (485), Expect = 2.030e-52
Identity = 125/315 (39.68%), Postives = 174/315 (55.24%), Query Frame = 1
Query:   13 LRGKNVIVTGANTGMGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHGDLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRRETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGS------IVFLSSLGHAQPPGQAKTVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAVNPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALDPALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAK 939
            L GK V++TGANTG+G   A ++AK GA+V + CRS E+G    D+  AE  E             T   V V  LDL S  S+ + ++ + AS D IDIL+NNAG+M  P  + T DG +M  G NH G  LLT +L   +R   +      I+ LSSL H   P      ++WDDIN EK  +YS   +Y QSKL N+L AKE ++RL+   I+ YAV+PG V+T+L R+           +L KP    + K P+ G+ T L CALD ++  A  SGKY++D +ET+P   A    +  RLW  +E+ +  K
Sbjct:   45 LNGKLVVITGANTGIGKATAEDLAKRGARVIILCRSVEKG----DEAAAEIKEN------------TGGQVEVRRLDLASLKSVRECAEALVASEDKIDILINNAGVMLCPHWK-TEDGFDMQFGTNHLGHFLLTEMLMPLIRKSEASGFHPRIIILSSLAHKGAP------INWDDINYEK--SYSAIAAYAQSKLANVLHAKELAERLSDTEISVYAVHPGAVDTELGRHF----YNKWWAKLFKPCASRLFKQPIHGAQTTLYCALDDSV--ANDSGKYYADCRETRPHSRALRKEDQKRLWDLSEKFVGLK 328          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7525.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM3_ECTSI2.360e-14665.83Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D8LP30_ECTSI1.720e-12559.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP92_9PHAE3.850e-12458.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL4_ECTSI1.830e-6954.50Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
A0A433SZU2_ELYCH5.370e-6543.69Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
UPI001F03DF248.260e-5637.90retinol dehydrogenase 13-like n=1 Tax=Xenia sp. Ca... [more]
A0A6A4VL08_AMPAM5.670e-5342.17Retinol dehydrogenase 12 n=2 Tax=Amphibalanus amph... [more]
A0A7R9X9Q0_9CRUS7.370e-5339.68Hypothetical protein (Fragment) n=1 Tax=Argulus fo... [more]
UPI001F03F6371.780e-5238.51uncharacterized protein LOC124454779 n=1 Tax=Xenia... [more]
A0A553N7Y6_TIGCA2.030e-5239.68Uncharacterized protein n=1 Tax=Tigriopus californ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7525contigC-tenellus_contig7525:2444..4658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPM3
PFAMsadh_short
Model size1686
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.29e-140
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
Descriptionoxidation-reduction process
Cds size918
COG categoryIQ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790042.5976079-UTR-C-tenellus_contig7525:2443..24971680790042.5976079-UTR-C-tenellus_contig7525:2443..2497Choristocarpus tenellus KU2346UTRC-tenellus_contig7525 2444..2497 +
1680790042.6354558-UTR-C-tenellus_contig7525:3944..46581680790042.6354558-UTR-C-tenellus_contig7525:3944..4658Choristocarpus tenellus KU2346UTRC-tenellus_contig7525 3945..4658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790042.6090252-CDS-C-tenellus_contig7525:2497..26291680790042.6090252-CDS-C-tenellus_contig7525:2497..2629Choristocarpus tenellus KU2346CDSC-tenellus_contig7525 2498..2629 +
1680790042.6192272-CDS-C-tenellus_contig7525:3158..39441680790042.6192272-CDS-C-tenellus_contig7525:3158..3944Choristocarpus tenellus KU2346CDSC-tenellus_contig7525 3159..3944 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7525.2.1prot_C-tenellus_contig7525.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7525 2498..3944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7525.2.1

>prot_C-tenellus_contig7525.2.1 ID=prot_C-tenellus_contig7525.2.1|Name=mRNA_C-tenellus_contig7525.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=306bp
MGYVKAREMAKMGAKVTMACRSAERGQAALDKLRAEALEKPVKEGVPLHG
DLTDVDVSVEVLDLGSFNSIIDFSQRVKASGDPIDILMNNAGLMAIPDRR
ETVDGMEMTVGVNHFGPHLLTRLLESTMRDGGSIVFLSSLGHAQPPGQAK
TVMSWDDINAEKPGAYSQWMSYGQSKLMNILDAKEFSKRLAPRGITTYAV
NPGMVNTDLTRYMTDGSLTSRLTRLLKPIQGCMLKTPLKGSSTALKCALD
PALGTAELSGKYWSDEKETKPSELASDPANVPRLWKATEEIIEAKLHKKI
DELLA*
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mRNA from alignment at C-tenellus_contig7525:2444..4658+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7525.2.1 ID=mRNA_C-tenellus_contig7525.2.1|Name=mRNA_C-tenellus_contig7525.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2215bp|location=Sequence derived from alignment at C-tenellus_contig7525:2444..4658+ (Choristocarpus tenellus KU2346)
CTCAACGTAGACCTGCGAGGCAAGAATGTGATTGTCACAGGTGCCAACAC TGGCATGGGTTACGTCAAAGCCAGAGAGATGGCCAAGATGGGAGCGAAGG TAACCATGGCCTGCCGGAGTGCGGAGCGAGGCCAAGCGGCACTGGACAAA CTCCGTGCAGAAGCTCTGGAGAAGCCTGTGAAGGAGGTGAGGCTGCGAGG CATGACCACGATGGATCTTCAGCCGATTTGTCGTAGGTTGACCCTGAGTA CAAAATGGTGACGCCATAAGACCTCCAGCCCACACCCCCAAAAAGGTTAT TTGTTGCCAGATATGTTCTTGTATCCTGGTACTCTTCAGATTGGTTGAGT ATACCTGATCGTGACATGAGTTTTCTCAATGGTCCGTCAGAGGAATGACT CCTGTCACAATGACACATGTACCTAAATCTGCACTCACCTATATTCTGGT GCTCTGGAGGGTAGTTCGGACGGTTATGATGTTGTTGGGGATCTTCTCGT GTTGTCACCTATTCCGGGCCTACAAATAGAAAACAACGCCCTTGTGAAGC AGCAAAGAGAAGGTAAACTTTCTGTGTGAAGGCACGAGATTGTTTAACCC AGCCTTGTATATTGATAGGGTAGCTCGTCAAAATCATGGATACATTCCGC TTGGAATTCTTCCTATAGATATGATGTTTATAAGCACTCCTGATACCCCA CAACCCAACTTGCAGGGGGTGCCGTTGCATGGAGACCTCACTGACGTTGA CGTGTCTGTAGAGGTGCTTGACCTGGGATCATTCAACTCCATCATTGACT TCAGCCAGCGTGTCAAGGCTTCCGGAGATCCCATTGACATTCTTATGAAC AATGCTGGATTGATGGCTATCCCTGACCGCCGAGAGACTGTGGATGGCAT GGAAATGACCGTGGGGGTGAACCACTTTGGTCCACACCTCTTGACTCGCC TTCTGGAATCCACCATGCGTGACGGTGGCAGCATCGTTTTCCTTTCGAGT CTTGGACATGCCCAGCCTCCTGGTCAGGCCAAAACTGTTATGTCATGGGA CGACATCAACGCGGAAAAACCTGGCGCCTACAGTCAGTGGATGTCCTACG GACAATCCAAGCTCATGAACATCCTGGACGCCAAGGAGTTCTCGAAGCGA CTTGCCCCTCGTGGTATCACAACATACGCTGTGAATCCTGGTATGGTGAA CACCGACCTAACGCGCTATATGACTGACGGAAGCTTAACTTCAAGGTTGA CACGCTTACTCAAACCCATCCAAGGTTGCATGCTCAAGACTCCACTCAAA GGATCATCCACGGCCCTCAAGTGCGCCTTGGACCCTGCCTTGGGCACAGC AGAACTCTCTGGAAAGTACTGGTCCGATGAGAAGGAGACCAAGCCGTCAG AGCTTGCATCTGACCCCGCCAATGTACCTCGTCTGTGGAAGGCTACAGAG GAGATTATTGAGGCCAAGCTCCACAAAAAGATTGACGAGTTGCTTGCATG AGGCTCTGGTGCTGATGGCATCTGGCAATGCATAGTGTACTGTAGCTTGG ACCCTCTTTATACTGTTGTAATTTTGATTGCAAGGAGGGAGTAATCTTGA GTGTTTTTTTGTCCAACCAATATTTGTCTTTCCCATTCTATGGACTTTTC AACCAACCCTTGCTTTCATTTGTCTCACCAAACACCAAACCACTACAAGG GTTTATTACCTTCCTGGACATTCTTCCACCAGACAACTTCTTCAAGGCAT TTCACCCCACATGCAGTGACATCTCTTTCACCAGGAAATATCTTCAGTGT CGTTCACCCCGTTTCTGATGGCATCTATTCCGTCGTATATATATTGTTTT GTCATAATCATTTGTTTCGGATCATTCACCGTATTCCTGTATTTCATGTA CGTTCACCAAAACCTCCTGCGAATACATACAAAAATACTTAAAACATTGG ACAGAATTACAATTCCTTCCACACACTGATGTTTGTACACTCCCCCATAG CATTAGGAACATTGCATTTACCCATAATTTTTTCTACAATGCTACAACCC ATCACATACAGTGTGACCTGGGTTTGGTGACAAGCACTCCCTCAATTCTG TAGGTCATTGGGAGCGTGCTACAGTAGTACACATTCTAGCTTCTATCATA CCAATTCCCAATCCAATTAAACAATTGATCTTAGGCAGGTACAACACCAT ATTGTATACCTCTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig7525:2444..4658+

>mRNA_C-tenellus_contig7525.2.1 ID=mRNA_C-tenellus_contig7525.2.1|Name=mRNA_C-tenellus_contig7525.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=918bp|location=Sequence derived from alignment at C-tenellus_contig7525:2444..4658+ (Choristocarpus tenellus KU2346)
ATGGGTTACGTCAAAGCCAGAGAGATGGCCAAGATGGGAGCGAAGGTAAC
CATGGCCTGCCGGAGTGCGGAGCGAGGCCAAGCGGCACTGGACAAACTCC
GTGCAGAAGCTCTGGAGAAGCCTGTGAAGGAGGGGGTGCCGTTGCATGGA
GACCTCACTGACGTTGACGTGTCTGTAGAGGTGCTTGACCTGGGATCATT
CAACTCCATCATTGACTTCAGCCAGCGTGTCAAGGCTTCCGGAGATCCCA
TTGACATTCTTATGAACAATGCTGGATTGATGGCTATCCCTGACCGCCGA
GAGACTGTGGATGGCATGGAAATGACCGTGGGGGTGAACCACTTTGGTCC
ACACCTCTTGACTCGCCTTCTGGAATCCACCATGCGTGACGGTGGCAGCA
TCGTTTTCCTTTCGAGTCTTGGACATGCCCAGCCTCCTGGTCAGGCCAAA
ACTGTTATGTCATGGGACGACATCAACGCGGAAAAACCTGGCGCCTACAG
TCAGTGGATGTCCTACGGACAATCCAAGCTCATGAACATCCTGGACGCCA
AGGAGTTCTCGAAGCGACTTGCCCCTCGTGGTATCACAACATACGCTGTG
AATCCTGGTATGGTGAACACCGACCTAACGCGCTATATGACTGACGGAAG
CTTAACTTCAAGGTTGACACGCTTACTCAAACCCATCCAAGGTTGCATGC
TCAAGACTCCACTCAAAGGATCATCCACGGCCCTCAAGTGCGCCTTGGAC
CCTGCCTTGGGCACAGCAGAACTCTCTGGAAAGTACTGGTCCGATGAGAA
GGAGACCAAGCCGTCAGAGCTTGCATCTGACCCCGCCAATGTACCTCGTC
TGTGGAAGGCTACAGAGGAGATTATTGAGGCCAAGCTCCACAAAAAGATT
GACGAGTTGCTTGCATGA
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