mRNA_C-tenellus_contig7523.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 156 bits (395), Expect = 8.280e-43 Identity = 73/100 (73.00%), Postives = 86/100 (86.00%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI-SFFRLEGLIQCVRMSSEG 321 GH AVYVA++SP DSLVASAGFDRTLR+WEGAYPYSQV L GHRQLI DLCWA DGRSL+S+SFDQTV WDTETG+R+ + LEGL+QCV++++EG Sbjct: 137 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 236
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.450e-22 Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 22 VGHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRIS-FFRLEGLIQCVRMSSEG 321 VGH AVY +SPC +LVAS GFDRT+R+WEG YP+SQV L HRQL+ D DTETG+R++ RLEG++QCV + G Sbjct: 78 VGHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSDXXXXXXXXXXXXXXXXXXXXXXDTETGQRVNNVLRLEGMLQCVSYADGG 178
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.810e-16 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ--VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFRLEGLIQCV 303 GH GAVY ++SPC L+AS D + +W+ ++Q + L H QL+ D+ W+ D RSL+S+S+D TV WDT+ G+ ++ + GL+Q V Sbjct: 117 GHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVNLWDTDKGQLLNSIGVNGLVQTV 211
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV) HSP 1 Score: 79.3 bits (194), Expect = 4.720e-15 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 34 GAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ--VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFRLEGLIQCV 303 GAVY ++SPC L+AS D + +W+ ++Q + LT H QLI D+ W+ D RSL+S+S+D TV WDT+ G+ ++ + GL+Q V Sbjct: 133 GAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVNLWDTDKGQLVNSVGVNGLVQTV 224
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE) HSP 1 Score: 62.4 bits (150), Expect = 4.430e-9 Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFR 279 GH AVY +SP ++A+AGFDR + VW + L GH + L WA L S S D+TV WD TG+R+ ++ Sbjct: 76 GHAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKTVAVWDGNTGERVRRYK 160
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A512UMM7_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UMM7_9ASCO) HSP 1 Score: 62.0 bits (149), Expect = 4.790e-9 Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ----VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 267 GH GAV+ ++SP +ASAG DRT+R+W ++ G + GH+ + L W + + ++S+S D TV WD ETG+R+ Sbjct: 26 GHSGAVFSVKFSPDGQHIASAGTDRTIRLWNLPTRANEESPNYGVIEGHKGGLTALSWLSQSK-ILSTSADSTVSIWDAETGQRL 109
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A4P6XGR8_9ASCO (Prp8 binding protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XGR8_9ASCO) HSP 1 Score: 62.0 bits (149), Expect = 4.940e-9 Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVW----EGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 267 GH+GA ++SP +ASAG DRT+R+W + G + GH+ + L W A + + + S D TV WD ETG+R+ Sbjct: 35 GHEGAALCVKFSPDGQNIASAGLDRTIRLWNLPTDAKDEVPNYGVIEGHKGAVTCLDWLAQSK-IFTGSADSTVAFWDAETGQRV 118
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1A0HJF3_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJF3_9ASCO) HSP 1 Score: 61.2 bits (147), Expect = 9.050e-9 Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWE----GAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 267 GH GAV+ +S +ASAG DRT+R+W G + GH++ I L W + ++S+S D TV WD ETG+R+ Sbjct: 26 GHTGAVFSIEFSADGHNIASAGMDRTIRLWNLPTTADNEAPNYGVIEGHKKAITSLSWILSSK-ILSASADSTVSVWDAETGQRL 109
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1I8C310_9BILA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8C310_9BILA) HSP 1 Score: 61.2 bits (147), Expect = 9.820e-9 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 25 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGK 261 GH+ V+ AR++ +VA+AGFD+ + +W + GH+ + DL ++ D L S S D+TV WD E GK Sbjct: 57 GHEAEVFTARFAGSGDIVATAGFDKQILLWNVWGECENYSHFKGHKHSVMDLKFSTDTSCLFSGSADKTVRAWDLENGK 135
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A261Y8R7_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y8R7_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 3.760e-8 Identity = 37/100 (37.00%), Postives = 46/100 (46.00%), Query Frame = 1 Query: 28 HKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYP-----------------YSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFF 276 H G V V R+ P ++ASAG D TL +WE + P Y L GHR I DL W+ DGR L++ S D T WD T + I F Sbjct: 85 HTGPVNVVRWHPKGGVLASAGDDATLIIWERSDPGQGSSTFGEDTSANIETYRVNQMLLGHRNEIYDLAWSPDGRYLITGSIDNTARLWDWTTRQCIHVF 184 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7523.3.1 >prot_C-tenellus_contig7523.3.1 ID=prot_C-tenellus_contig7523.3.1|Name=mRNA_C-tenellus_contig7523.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp MFIRVTQVGHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLback to top mRNA from alignment at C-tenellus_contig7523:5346..6161+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7523.3.1 ID=mRNA_C-tenellus_contig7523.3.1|Name=mRNA_C-tenellus_contig7523.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=816bp|location=Sequence derived from alignment at C-tenellus_contig7523:5346..6161+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7523:5346..6161+ >mRNA_C-tenellus_contig7523.3.1 ID=mRNA_C-tenellus_contig7523.3.1|Name=mRNA_C-tenellus_contig7523.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=321bp|location=Sequence derived from alignment at C-tenellus_contig7523:5346..6161+ (Choristocarpus tenellus KU2346)back to top |