mRNA_C-tenellus_contig7523.1.4 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7523.1.4
Unique NamemRNA_C-tenellus_contig7523.1.4
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.160e-49
Identity = 112/300 (37.33%), Postives = 152/300 (50.67%), Query Frame = 1
Query:  580 LNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461
            LN++L G F   LL N+     WL    PRLR  +V V+LVH     QGM   C    +      P  + YG HHTKM V  Y   +RVA+FTANF  +DW    QGVW+QDF  K +D G +  +                                    +NDFE  L  Y  +LG +V ++F R L  ++FS+A  ALVPSVPGYH G+++ KYGH+RVR LL+    P + +   +  QFSS+ ++ E +L  E   SF+  +    P       L ++WP+VE VR SL GW+SG
Sbjct:   75 LNELLEGEFTRCLLTNYMYDLPWLFAECPRLR--DVPVLLVHGERDRQGMMKECREYSNVTPVAPPLPIAYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGVWFQDFGLKVLDDGEEEKEA----------------------------VAPNSAAINDFEADLVHYLSSLGAQV-KIFCRELKRFDFSSARVALVPSVPGYHKGKDMEKYGHLRVRKLLKMYQVPPTDNP--LICQFSSMGSLDEKWLFGEFAESFLPGKKNISPTPMPVQALHIIWPSVEDVRNSLEGWNSG 341          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN)

HSP 1 Score: 184 bits (466), Expect = 1.790e-46
Identity = 119/302 (39.40%), Postives = 157/302 (51.99%), Query Frame = 1
Query:  574 VKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVH-----DGSQGMCDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461
            V L+D+LSG F  VLL N+     WL    PRL   +V VVLVH     +  Q  C G  +  A      + YG HHTKM VV YAT +RVA+FTANF   DW    QGVW+QDF    +       D + +E +R +L G       ++                DF+  L +Y   LG  VV  F R L  ++FS AT ALVPSVPGYHTG    KYGH+RVR +L++   P S     +  QFSSL ++ E +L  E   S M +  P+   +  +  L +VWP+V+ VR S+ GW +G
Sbjct:  643 VGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLA--DVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIG-----EDDEEDERKRADL-GAGAGVEPVV----------------DFKRDLVEYLSTLGAPVVA-FCRELERFDFSTATVALVPSVPGYHTGAAKDKYGHLRVRRILQHFNVPRSDHP--LICQFSSLGSLDEKWLFGEFAESLMPRPLPTSTPMPIKS-LHIVWPSVDDVRNSIEGWHAG 916          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 6.470e-46
Identity = 120/307 (39.09%), Postives = 158/307 (51.47%), Query Frame = 1
Query:  571 CVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461
            C  L+D+L G F   LL N+     WL    PRLR  +V V+LVH     QGM   C    +      P  + +G HHTKM V  Y   +RVA+FTANF   DW    QGVW+QDF  K +D                          S  XXXXXXX    +G  NDFE+ L  Y  +LG +V +LF   L  ++FS A  AL+PSVPG H G+++ +YGH+RVR LL+    P + +   +  QFSSL ++ E +L  E   SF+    P K  +S        L ++WP+VE VR SL GW+SG
Sbjct:   55 CKSLHDLLEGEFTRCLLTNYMYDLPWLFSECPRLR--QVPVLLVHGERDRQGMTKKCREYANVTPVAPPLPIPFGTHHTKMLVALYPDKVRVAIFTANFLSGDWNTKTQGVWFQDFSLKILD-------------------------DSEXXXXXXXXTASSRGG-NDFEEDLVHYLSSLGAQV-KLFCGELKRFDFSRAHVALIPSVPGVHKGKDMERYGHLRVRKLLKTFNVPQTDNP--LICQFSSLGSLDEKWLFGEFAESFL----PGKKNISASSMPVQALHIIWPSVEDVRNSLEGWNSG 326          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL)

HSP 1 Score: 174 bits (440), Expect = 6.050e-45
Identity = 118/326 (36.20%), Postives = 162/326 (49.69%), Query Frame = 1
Query:  526 LFRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD-----GSQGMCDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFM------AQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461
            LFRL RL    +      + L ++  G +   LL N+     WL  S PRL   +V VVLVH           C G  +         + YG HHTKMAV+ Y T  RVA+FTANF   DW    QGVW+QDF  K +       + D +E ++++ +                     +  + DFE  L +Y   LG  VV  F + LS ++FS AT AL+PSVPG HTG+ +HKYGH+RVRALL++ A   S     +  QFSSL ++ E +L  E   S M      A  G + P  +    L ++WP+V  VR S+ GW++G
Sbjct:   51 LFRLTRLKDAPERHNRYAIGLQELFEGEYTQCLLTNYMYDLPWLFASCPRLH--DVPVVLVHGERDRHAMTQECKGYGNVTPVAPYLPIPYGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKAL------GEDDASEEKKQHQK---------------------QAAVADFERDLIEYLSTLGTPVVT-FCKELSRFDFSTATVALIPSVPGAHTGKAMHKYGHLRVRALLKHFAVAPSDHP--LICQFSSLGSLDEKWLFGEFAGSLMPGPTQLASGGSTLPIKA----LHIIWPSVNDVRNSVEGWNAG 340          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN)

HSP 1 Score: 172 bits (437), Expect = 1.150e-44
Identity = 115/305 (37.70%), Postives = 152/305 (49.84%), Query Frame = 1
Query:  577 KLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461
            +L+D+L G F   LL N+     WL    PRL+  EV VVLVH     QGM   C    +      P  + YG HHTKM V  Y   +RVA+FTANF  +DW    QG+WYQDF  K +      SD++  E   R+                           +DFE  L  Y  +LG  V +LF   L  ++FS+A  ALVPSVPG H G+++ KYGH+RVR LL+    P + +   +  QFSSL ++ E +L  E   S +    P K  +S        L ++WP VE VR SL GW+SG
Sbjct:   46 RLSDLLEGDFSRCLLANYMFDLPWLFTECPRLK--EVPVVLVHGERDRQGMTKECRDYSNVTPVAPPLPIPYGTHHTKMLVALYPERVRVAIFTANFLSNDWNTKTQGLWYQDFGLKVL----TDSDEEEKEAVARSS--------------------------SDFEADLVHYLSSLGAPV-KLFCGELKRFDFSSARVALVPSVPGVHKGKDMEKYGHLRVRKLLKMYKIPPTDNP--LICQFSSLGSLDEKWLFGEFAESLL----PGKKHISSTSMPVQALHVIWPAVEDVRNSLEGWNSG 311          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.400e-43
Identity = 118/323 (36.53%), Postives = 161/323 (49.85%), Query Frame = 1
Query:  529 FRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVH-DGSQGM----CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQR----GPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461
            F L RL G  D      + L ++L G F SVLL N+ V  DWLL   PRLR  +V V+LVH +  +G     C  + +      P  + YG HH KM V  Y   +RVA+FTANF   DWE   QGVW+QDF  K +   A+ +D  G               S++                 DFE  L  Y  ALG +V     R ++ ++FS A  AL+PSVPG H G ++ K+GH+RVR LL+    P S +   +  QFSS+ ++ E +L  E   S +  +    G S P  +    L L+WP+VE VR S  GW++G
Sbjct:  302 FHLTRLRGAPDAHNQHAMGLRELLDGAFESVLLSNYMVDVDWLLGECPRLR--DVPVLLVHGERDRGAMLTACRALANVTLVAPPLPIAYGTHHAKMLVAVYPEKVRVAIFTANFIAIDWENKTQGVWFQDFGLKTLSDDAE-ADAVG---------------SAVTVERGPAEL--------DFEADLVAYLSALGARVAAFCKRHVARFDFSGANVALIPSVPGVHKGSDMEKFGHLRVRKLLQLLKVPPSDNP--LICQFSSMGSLDEKWLFGEFAQSLLKGKKGITGTSAPVQA----LHLIWPSVEDVRNSTEGWNAG 592          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.710e-42
Identity = 127/356 (35.67%), Postives = 166/356 (46.63%), Query Frame = 1
Query:  523 PLFRL-NRLLGDHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCDGMPSNVAC--------HHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGY-----------HTGRNLHKYGHMRVRALLENEAFPNSGDR--DG---ISAQFSSLATV---PEGFLDELTNSFMA------QRGPSKPKVS--------CRDHLQLVWPTVEGVRTSLRGWSSGG 1464
            PL+RL +    D      V L+D+LSG F S LLCN+ V Y  L+   PRL    V V +VH    G  D +     C         +P+  +YG +H KM ++K+ TGIRVAV TANF   D     QGVWYQDFP                          +R + S                   F++ L  +   +GG     FA TL  Y+F  A  ALVPSVPG            H GR+LHKYGHMRVRALL  E    +G +  +G   +  Q SSLA++   P  +L E+  SFM       +  P++  VS           HL++VWP+VE VRTS +GW +GG
Sbjct:   81 PLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLG--SVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFP--------------------------KRTSGSCA-----------------FQEDLMGFLFKVGGPA-SAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGG 390          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A1V9ZNZ3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNZ3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.570e-42
Identity = 104/303 (34.32%), Postives = 145/303 (47.85%), Query Frame = 1
Query:  571 CVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCD---GMPSNVACHHPKT-LQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPG-YHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFLDELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSGG 1464
            C+  ND+L+G F   +L N+++  +WLL+   RL  E+V V+L H G Q       G  +N+    P   + YG HHTKM V+ Y+  +RVA+FTANF   DW    QG+WYQDFP KE                                              N FE  L  Y  +L  KV    A  L+LY+F+ A   L+PSVPG Y T  ++HKYGH+R++ +LE        ++  + AQFSS  ++ E +L E  +SF        P         +VWP+V  VR S+ GW +GG
Sbjct:  622 CISFNDILAGEFTHAILTNYKIDAEWLLKQSTRL--EQVPVLLCHGGDQQRMKNAIGKRTNITVIAPPLPIPYGTHHTKMTVLFYSQFVRVAIFTANFLAGDWNDKTQGIWYQDFPLKEES--------------------------------------TTSTATNTFEQDLAGYLSSLHPKVADWCATKLALYDFNQAQVILIPSVPGTYSTPTDMHKYGHLRLKKVLEQNNVSKKPNQP-VVAQFSSFGSLNESWLMEFLSSFRLCTVSILPPPK---EFHIVWPSVAAVRGSIEGWRAGG 880          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.540e-42
Identity = 112/304 (36.84%), Postives = 153/304 (50.33%), Query Frame = 1
Query:  580 LNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461
            LND+L G F   LL N+     WL    PRLR  +V V+LVH     QGM   C    +  +   P  + YG HHTKM V  Y   +RVA+FTANF  +DW    QG+WYQDF  K +                 + E E ++A +                 ++FE  L  Y  +LG  V ++F   L  ++FS A  ALVP+VPG H G+++ KYGH+RVR LL+    P + +   +  QFSSL ++ E +L  E   SF+    P K  +S        L ++WP+VE V+ SL GWSSG
Sbjct:  173 LNDLLEGDFTRCLLTNYMFDLPWLFAECPRLR--DVPVLLVHGERDRQGMTKECREYANVTSVAPPLPIPYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVL----------------ADSEDEEKEAVAGA---------------SEFEADLAHYLSSLGAPV-KVFCGELKRFDFSTARVALVPAVPGVHKGKDMEKYGHLRVRKLLKMYKVPPTDNP--LICQFSSLGSLDEKWLFGEFAESFL----PGKRNISSTSMPTQALHIIWPSVEDVQNSLEGWSSG 436          
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A7C9AQX7_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AQX7_OPUST)

HSP 1 Score: 165 bits (417), Expect = 8.200e-42
Identity = 108/318 (33.96%), Postives = 161/318 (50.63%), Query Frame = 1
Query:  529 FRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCDGM----PSNVACHHPKT-LQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFLDELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461
            FRL R+ G  +    +CV + DV+ G     +L N+ V  +WLL + P L+    QV++VH  S G  + M    PSN   H P   + YG HH+K  ++ Y  G+RV V TAN    DW    QG+W QDFP K   G  K SD +             RD    +             KL +F   L+    ALG   +++ A     +++  A   L+ SVPGYH+G +L ++GHM++R++LE  AF     R  +  QFSSL ++ E +++EL +S  +     K  +   + L ++WPTVE VR SL G+++G
Sbjct:   22 FRLMRVQGLPEWANTSCVSIEDVIKGDVLLAILSNYMVDMEWLLCACPTLK-RVPQVLVVHGESDGTLEYMKKTKPSNWILHKPPLPISYGTHHSKAMLLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKGQHGACKGSDFE-------------RDLVDYLQAL----------KLPEFTADLQ----ALGR--LKIDASFFKKFDYGNAAVRLIASVPGYHSGAHLKRWGHMKLRSVLEGHAFDEEFRRSPLVYQFSSLGSLDEKWMNELRSSMSSGLSVDKTPLGLGEPL-IIWPTVEDVRCSLEGYAAG 308          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4E9V0_9STRA2.160e-4937.33Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophtho... [more]
A0A2D4BMS2_PYTIN1.790e-4639.40Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
H3GC32_PHYRM6.470e-4639.09Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1CIS9_PYTOL6.050e-4536.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833TKC6_PHYIN1.150e-4437.70Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora... [more]
A0A5D6XVY7_9STRA2.400e-4336.53Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID... [more]
D8LE95_ECTSI1.710e-4235.67Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus T... [more]
A0A1V9ZNZ3_9STRA3.570e-4234.32Tyrosyl-DNA phosphodiesterase n=1 Tax=Thraustothec... [more]
A0A225WPR3_9STRA5.540e-4236.84Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora... [more]
A0A7C9AQX7_OPUST8.200e-4233.96Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7523contigC-tenellus_contig7523:442..4246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo143374
PFAMsTyr-DNA_phospho
Model size1467
Max annot lvl4776|Peronosporales
KEGG koko:K10862
Hectar predicted targeting categoryother localisation
Exons7
Evalue5.69e-49
EggNOG OGsKOG2031@1|root,KOG2031@2759|Eukaryota,3QBC0@4776|Peronosporales
DescriptionTyrosyl-DNA phosphodiesterase
Cds size1251
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7523.1.4prot_C-tenellus_contig7523.1.4Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7523 442..3463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790042.3608973-CDS-C-tenellus_contig7523:441..5911680790042.3608973-CDS-C-tenellus_contig7523:441..591Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 442..591 -
1680790042.3786857-CDS-C-tenellus_contig7523:1268..14611680790042.3786857-CDS-C-tenellus_contig7523:1268..1461Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 1269..1461 -
1680790042.3913825-CDS-C-tenellus_contig7523:1780..18391680790042.3913825-CDS-C-tenellus_contig7523:1780..1839Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 1781..1839 -
1680790042.4043815-CDS-C-tenellus_contig7523:2092..23921680790042.4043815-CDS-C-tenellus_contig7523:2092..2392Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 2093..2392 -
1680790042.4152255-CDS-C-tenellus_contig7523:2649..26921680790042.4152255-CDS-C-tenellus_contig7523:2649..2692Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 2650..2692 -
1680790042.4263306-CDS-C-tenellus_contig7523:2957..34631680790042.4263306-CDS-C-tenellus_contig7523:2957..3463Choristocarpus tenellus KU2346CDSC-tenellus_contig7523 2958..3463 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790042.4355917-UTR-C-tenellus_contig7523:3463..36311680790042.4355917-UTR-C-tenellus_contig7523:3463..3631Choristocarpus tenellus KU2346UTRC-tenellus_contig7523 3464..3631 -
1680790042.4472125-UTR-C-tenellus_contig7523:4198..42461680790042.4472125-UTR-C-tenellus_contig7523:4198..4246Choristocarpus tenellus KU2346UTRC-tenellus_contig7523 4199..4246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7523.1.4

>prot_C-tenellus_contig7523.1.4 ID=prot_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=417bp
MNVIEILSEGEQDSEEEENFQAAIRNSLATRQDQTDSISQGVLDPNTMPI
VAPPNQDLALEQAIRNSLVDTKSGVSGEGYGTRSRHDQPRVKRRRTAGPP
RNPLFRLNRLLGDHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVP
RLRLEEVQVVLVHDGSQGMCDGMPSNVACHHPKTLQYGCHHTKMAVVKYA
TGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRR
RNLEGERRDASSIMGGASSNSSSSEKGKLNDFEDTLKDYFDALGGKVVRL
FARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNS
GDRDGISAQFSSLATVPEGFLDELTNSFMAQRGPSKPKVSCRDHLQLVWP
TVEGVRTSLRGWSSGG*
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mRNA from alignment at C-tenellus_contig7523:442..4246-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7523.1.4 ID=mRNA_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3805bp|location=Sequence derived from alignment at C-tenellus_contig7523:442..4246- (Choristocarpus tenellus KU2346)
TCCTCATTGTCCCGTTCTAACACCGAGAGAGACTGTCGCAATCCATCCCT GCATGGGTGTGACAAGATCAGTACGTCCAGTGGAAGAACAGCTTGGGTGA CTCAAGAGAACTTACTAGAAGTAGGGCCTTACTTCGTGACCAAGGTGGGG TCCCATACCACTGGCAAGCCAGCAAGGACCAAAGGGCAACACGGTGAAGT GGCACTCTCTGATATTCGAAACAAGGCAATGCCGGTCGTCAACCATTTGA GATAAGACTGTTCCACCAGGGCAAAGCCCTCTATAGTATGGAGGTCTTGG TGATTTGGGATCCCACCGATAAAATACGATAGACTTCTTGGTGCGTGCAG GGGGCTTGGACCCTACAGAAGTATGGCCAAGGGCAACACAAACGAAACTT ATTACGTGCTAAACACATCTCTGACCTCTCCTTGCACACAAGCTCGTACT TCGTCTTGAGATAAGCGTCAGAGGTTGCTTTAGGTTTAGCCGGCATATGT GGCGTGCCTGCCATGTCTCGGTCTAATCGGACGTGCATCGACCGCAGGGA TCTACAGGCAAAGAATCTAGGCACTCATACTTGTGCACTTCCTAGACTCT CAGCAGAACACTTACATACCCCTCCGTCGTTCACCTAGACCCCCTTCATT GAGAAGGCGAGTTGTTTGAAATTGAAGGCCAGGTCGCCCTAACCCTACCT TAGTTTCGACAAAGAACAAAAATCAAGGTTAGAAAGATGTTGGGTGTGTC AAGGGTGTCGTAGAGTTGAATGTGGGGAGAAGGATGAACGTCATTGAGAT ATTGAGCGAGGGGGAGCAAGACAGTGAGGAGGAAGAGAATTTCCAAGCAG CAATCCGTAACTCTTTGGCAACTCGTCAAGATCAGACTGACTCCATCTCC CAGGGTGTACTGGATCCGAATACCATGCCAATCGTTGCGCCTCCCAACCA GGACCTAGCTCTCGAGCAGGCTATCCGAAATAGTCTAGTGGATACCAAAT CGGGGGTCTCTGGGGAGGGTTACGGCACGAGGTCCAGGCATGACCAACCT AGGGTCAAACGCAGGCGGACTGCAGGTCCACCTAGAAATCCTTTATTTCG ATTGAACCGTCTCTTGGGAGACCATCAGGAAGGGACTTGTGTAAAACTAA ACGATGTGCTGTCAGGTCCCTTTTATTCAGTGCTTCTTTGCAACTTCCAA GTCATGTACGATTGGTTACTGGAGTCCGTGCCGAGGTTGAGGTTGGAAGA AGTACAGGTCGTGCTGGTGCATGATGGAAGTCAGGGAATGTGAGTGTGTC CGACAAAGCCAGTAAACTTTGTTTTTGCAATCTTGCGCTCCCCCTAGAAA CATACAGTTTGTGCTGCTGAAATATGTGCCCTCGCATGGTTGTTTGAGGC TCACCAATGCATCATTTGACGGTGCGTGTTATGCTCTAAGGGTTTGAAGC ATTGGCAGACTTAGCAACATAATGCAAAAGGATCTTCTCATTGGCTGACT CTCCTTCTTCTCTTTATCTCTGAACCGTTTCTCGCTTGATTGTCTACCGT ACAGGTGTGATGGAATGCCTTCTAATGTCGCATGCCATCACCCCAAGGTG AGAAGGAAAGGTTGTTTGGTGAATCAAAATCGCCCTCCACATTTCAAAGT ATAATGTCACATGCCATCAAACCGAGGTGAGCTACCACATAGCCAAGCCA TATTTGGCAACGAAAACCTGACTACCCACTCCCCACCATACACAGTTTAC TCTGCCCTAAATGATGTTGCAGCCATTCCCTATCTTGATCATCTCGCCTG TGGCCCTGGATCCATTGTTTGGGTTGAATGTGGATCCTCCCTGTGTATAT ATAGACGCTGCAATACGGCTGCCACCACACCAAGATGGCAGTGGTGAAGT ATGCAACTGGCATTCGGGTAGCAGTGTTCACAGCAAACTTCAGGGAGTCG GACTGGGAAGGGATGGTTCAAGGTGTGTGGTACCAGGACTTTCCTGCCAA AGAGGTTGATGGAGGTGCCAAACACAGCGACCAGGATGGAAATGAAGGCA GGAGGAGAAACCTTGAGGGAGAAAGAAGGGATGCCAGCAGCATCATGGGC GGAGCAAGTAGTAACAGCTCAAGCAGTGAAAAAGGAAAGCTCAATGACTT CGAGGTGCGTATGACATAGGCCCAGGGGATACCTCTTCATTTTGTTCCGT TGTAGACTATTGTTGAGTATGTTGCAGAAACACTACATATCAGCCTGTGA GGTGCCAGACTAAGCATCACTGTAGCCTGCAAACCATTAGTGTAGAATGG TCTTCCAGATTTTTTTTATATAATTGAGTCAGCCTGTGCCTCCTCTTCCC CTTTCGACCTTGGTAAATGCAACAACCGCCTGCTCTCCCTACTTGTACAT TTCCCAGGACACCTTGAAGGACTACTTTGATGCACTAGGTGGCAAAGTGG TCAGGCTATTTGCAAGGTGCATCAAGGTGCTCTCCTACAAAGAGAGACAC ACACTTACATGTGTGGATCAATGTCTTAAGCAGTGTGTTTGTCTTCCATT CGTAGAATGCCATGTCTCTTTCCTCTACCATGTTGCTTACATCGTATTTT GAGGAAGTACACAAGAGCCTGCGTCACAAGTGTTGCCTAAGTGGGGCTTG TAACTGAATTTTACTTTGTGCTATCTCCTTTGCACCACTTGTTGGTGACT CAGGTCCTTGTCATCTCCCTTCACTGGCTTGTAACCAATGCACACATACC TACCTCCGTTTCTTTCTTTTCTGCACAAAAATAAGGACACTCTCCCTGTA CAACTTTTCGGCCGCTACGGCTGCCCTTGTACCCAGTGTACCTGGCTATC ACACGGGGAGGAATTTGCACAAATATGGCCACATGCGTGTGAGGGCACTG CTCGAAAATGAAGCTTTCCCAAACAGTGGGGATAGAGATGGGATATCTGC TCAGTTCAGCAGTTTGGCTACTGTTCCTGTAAGAGCCCCTTTCCTTGCCT CCGATACCCAGCTGTTTCTCTACCTCCCTGGATCCTGTCATGTTCTTGTG TCCCTTGTACAGATACACACACTTGAGAGTAGCATGTGCATGCCATGATG TACTGTTGGCTAGCACTGTGTTCTGTGTAAGTATGGAGTCTTTTCCCACC CGCAGCAGCAGCAGGTGCAATGCACGGTAGCCTGGAAAATTTGAAGACCA CTCTCTGTACACCTTTTTCTAGTTCATATGGTAACATACCATTAGGAACA TGGAGAGGATTGCGTTTTCCTCTTTTTGGATGTGAGCGCCGACTTTCGTT GTGGATGTTGTTTGAAGCTGTTGAAGAGACTGCACCTTGTGGGGTGATGA AGATATACCGGAGTATATATATATATATATATATCAGAACTACCGTTTGC GCCTGACTCCACCGCCACGGGAATCTGTATCGCAGTGTAGGGGTGTCAAA AGGAATGTCCTGTTAGGGCTGCCCCCGGTTTTATGTAGGGGAGGCGTTGA AGCGGCAGTAGAAGATCTCCTTCGGACTGCCATGATGATTCGGACTTCCT TGGCCAGGGAGTATGGGAGTCTTGGTTATACACCCTTTCCGGAACGCCTA GAACCTTAATCACCCCACTGGATTTTTCTGTTCCCTGGACCAATCTTATC TCCAGGAAGGTTTTCTCGATGAGCTCACCAATTCCTTCATGGCACAGAGG GGACCGAGTAAGCCCAAGGTGAGCTGTAGGGACCATCTTCAACTTGTGTG GCCAACAGTGGAAGGCGTACGGACATCTTTGAGAGGGTGGTCATCAGGCG GGTAA
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Coding sequence (CDS) from alignment at C-tenellus_contig7523:442..4246-

>mRNA_C-tenellus_contig7523.1.4 ID=mRNA_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1251bp|location=Sequence derived from alignment at C-tenellus_contig7523:442..4246- (Choristocarpus tenellus KU2346)
ATGAACGTCATTGAGATATTGAGCGAGGGGGAGCAAGACAGTGAGGAGGA
AGAGAATTTCCAAGCAGCAATCCGTAACTCTTTGGCAACTCGTCAAGATC
AGACTGACTCCATCTCCCAGGGTGTACTGGATCCGAATACCATGCCAATC
GTTGCGCCTCCCAACCAGGACCTAGCTCTCGAGCAGGCTATCCGAAATAG
TCTAGTGGATACCAAATCGGGGGTCTCTGGGGAGGGTTACGGCACGAGGT
CCAGGCATGACCAACCTAGGGTCAAACGCAGGCGGACTGCAGGTCCACCT
AGAAATCCTTTATTTCGATTGAACCGTCTCTTGGGAGACCATCAGGAAGG
GACTTGTGTAAAACTAAACGATGTGCTGTCAGGTCCCTTTTATTCAGTGC
TTCTTTGCAACTTCCAAGTCATGTACGATTGGTTACTGGAGTCCGTGCCG
AGGTTGAGGTTGGAAGAAGTACAGGTCGTGCTGGTGCATGATGGAAGTCA
GGGAATGTGTGATGGAATGCCTTCTAATGTCGCATGCCATCACCCCAAGA
CGCTGCAATACGGCTGCCACCACACCAAGATGGCAGTGGTGAAGTATGCA
ACTGGCATTCGGGTAGCAGTGTTCACAGCAAACTTCAGGGAGTCGGACTG
GGAAGGGATGGTTCAAGGTGTGTGGTACCAGGACTTTCCTGCCAAAGAGG
TTGATGGAGGTGCCAAACACAGCGACCAGGATGGAAATGAAGGCAGGAGG
AGAAACCTTGAGGGAGAAAGAAGGGATGCCAGCAGCATCATGGGCGGAGC
AAGTAGTAACAGCTCAAGCAGTGAAAAAGGAAAGCTCAATGACTTCGAGG
ACACCTTGAAGGACTACTTTGATGCACTAGGTGGCAAAGTGGTCAGGCTA
TTTGCAAGGACACTCTCCCTGTACAACTTTTCGGCCGCTACGGCTGCCCT
TGTACCCAGTGTACCTGGCTATCACACGGGGAGGAATTTGCACAAATATG
GCCACATGCGTGTGAGGGCACTGCTCGAAAATGAAGCTTTCCCAAACAGT
GGGGATAGAGATGGGATATCTGCTCAGTTCAGCAGTTTGGCTACTGTTCC
TGAAGGTTTTCTCGATGAGCTCACCAATTCCTTCATGGCACAGAGGGGAC
CGAGTAAGCCCAAGGTGAGCTGTAGGGACCATCTTCAACTTGTGTGGCCA
ACAGTGGAAGGCGTACGGACATCTTTGAGAGGGTGGTCATCAGGCGGGTA
A
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