mRNA_C-tenellus_contig7523.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.160e-49 Identity = 112/300 (37.33%), Postives = 152/300 (50.67%), Query Frame = 1 Query: 580 LNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461 LN++L G F LL N+ WL PRLR +V V+LVH QGM C + P + YG HHTKM V Y +RVA+FTANF +DW QGVW+QDF K +D G + + +NDFE L Y +LG +V ++F R L ++FS+A ALVPSVPGYH G+++ KYGH+RVR LL+ P + + + QFSS+ ++ E +L E SF+ + P L ++WP+VE VR SL GW+SG Sbjct: 75 LNELLEGEFTRCLLTNYMYDLPWLFAECPRLR--DVPVLLVHGERDRQGMMKECREYSNVTPVAPPLPIAYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGVWFQDFGLKVLDDGEEEKEA----------------------------VAPNSAAINDFEADLVHYLSSLGAQV-KIFCRELKRFDFSSARVALVPSVPGYHKGKDMEKYGHLRVRKLLKMYQVPPTDNP--LICQFSSMGSLDEKWLFGEFAESFLPGKKNISPTPMPVQALHIIWPSVEDVRNSLEGWNSG 341
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 184 bits (466), Expect = 1.790e-46 Identity = 119/302 (39.40%), Postives = 157/302 (51.99%), Query Frame = 1 Query: 574 VKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVH-----DGSQGMCDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461 V L+D+LSG F VLL N+ WL PRL +V VVLVH + Q C G + A + YG HHTKM VV YAT +RVA+FTANF DW QGVW+QDF + D + +E +R +L G ++ DF+ L +Y LG VV F R L ++FS AT ALVPSVPGYHTG KYGH+RVR +L++ P S + QFSSL ++ E +L E S M + P+ + + L +VWP+V+ VR S+ GW +G Sbjct: 643 VGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLA--DVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIG-----EDDEEDERKRADL-GAGAGVEPVV----------------DFKRDLVEYLSTLGAPVVA-FCRELERFDFSTATVALVPSVPGYHTGAAKDKYGHLRVRRILQHFNVPRSDHP--LICQFSSLGSLDEKWLFGEFAESLMPRPLPTSTPMPIKS-LHIVWPSVDDVRNSIEGWHAG 916
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM) HSP 1 Score: 176 bits (447), Expect = 6.470e-46 Identity = 120/307 (39.09%), Postives = 158/307 (51.47%), Query Frame = 1 Query: 571 CVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461 C L+D+L G F LL N+ WL PRLR +V V+LVH QGM C + P + +G HHTKM V Y +RVA+FTANF DW QGVW+QDF K +D S XXXXXXX +G NDFE+ L Y +LG +V +LF L ++FS A AL+PSVPG H G+++ +YGH+RVR LL+ P + + + QFSSL ++ E +L E SF+ P K +S L ++WP+VE VR SL GW+SG Sbjct: 55 CKSLHDLLEGEFTRCLLTNYMYDLPWLFSECPRLR--QVPVLLVHGERDRQGMTKKCREYANVTPVAPPLPIPFGTHHTKMLVALYPDKVRVAIFTANFLSGDWNTKTQGVWFQDFSLKILD-------------------------DSEXXXXXXXXTASSRGG-NDFEEDLVHYLSSLGAQV-KLFCGELKRFDFSRAHVALIPSVPGVHKGKDMERYGHLRVRKLLKTFNVPQTDNP--LICQFSSLGSLDEKWLFGEFAESFL----PGKKNISASSMPVQALHIIWPSVEDVRNSLEGWNSG 326
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 174 bits (440), Expect = 6.050e-45 Identity = 118/326 (36.20%), Postives = 162/326 (49.69%), Query Frame = 1 Query: 526 LFRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD-----GSQGMCDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFM------AQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461 LFRL RL + + L ++ G + LL N+ WL S PRL +V VVLVH C G + + YG HHTKMAV+ Y T RVA+FTANF DW QGVW+QDF K + + D +E ++++ + + + DFE L +Y LG VV F + LS ++FS AT AL+PSVPG HTG+ +HKYGH+RVRALL++ A S + QFSSL ++ E +L E S M A G + P + L ++WP+V VR S+ GW++G Sbjct: 51 LFRLTRLKDAPERHNRYAIGLQELFEGEYTQCLLTNYMYDLPWLFASCPRLH--DVPVVLVHGERDRHAMTQECKGYGNVTPVAPYLPIPYGTHHTKMAVLLYPTKARVAIFTANFIAIDWHNKTQGVWFQDFELKAL------GEDDASEEKKQHQK---------------------QAAVADFERDLIEYLSTLGTPVVT-FCKELSRFDFSTATVALIPSVPGAHTGKAMHKYGHLRVRALLKHFAVAPSDHP--LICQFSSLGSLDEKWLFGEFAGSLMPGPTQLASGGSTLPIKA----LHIIWPSVNDVRNSVEGWNAG 340
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN) HSP 1 Score: 172 bits (437), Expect = 1.150e-44 Identity = 115/305 (37.70%), Postives = 152/305 (49.84%), Query Frame = 1 Query: 577 KLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461 +L+D+L G F LL N+ WL PRL+ EV VVLVH QGM C + P + YG HHTKM V Y +RVA+FTANF +DW QG+WYQDF K + SD++ E R+ +DFE L Y +LG V +LF L ++FS+A ALVPSVPG H G+++ KYGH+RVR LL+ P + + + QFSSL ++ E +L E S + P K +S L ++WP VE VR SL GW+SG Sbjct: 46 RLSDLLEGDFSRCLLANYMFDLPWLFTECPRLK--EVPVVLVHGERDRQGMTKECRDYSNVTPVAPPLPIPYGTHHTKMLVALYPERVRVAIFTANFLSNDWNTKTQGLWYQDFGLKVL----TDSDEEEKEAVARSS--------------------------SDFEADLVHYLSSLGAPV-KLFCGELKRFDFSSARVALVPSVPGVHKGKDMEKYGHLRVRKLLKMYKIPPTDNP--LICQFSSLGSLDEKWLFGEFAESLL----PGKKHISSTSMPVQALHVIWPAVEDVRNSLEGWNSG 311
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A5D6XVY7_9STRA (Carbonic anhydrase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVY7_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.400e-43 Identity = 118/323 (36.53%), Postives = 161/323 (49.85%), Query Frame = 1 Query: 529 FRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVH-DGSQGM----CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQR----GPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461 F L RL G D + L ++L G F SVLL N+ V DWLL PRLR +V V+LVH + +G C + + P + YG HH KM V Y +RVA+FTANF DWE QGVW+QDF K + A+ +D G S++ DFE L Y ALG +V R ++ ++FS A AL+PSVPG H G ++ K+GH+RVR LL+ P S + + QFSS+ ++ E +L E S + + G S P + L L+WP+VE VR S GW++G Sbjct: 302 FHLTRLRGAPDAHNQHAMGLRELLDGAFESVLLSNYMVDVDWLLGECPRLR--DVPVLLVHGERDRGAMLTACRALANVTLVAPPLPIAYGTHHAKMLVAVYPEKVRVAIFTANFIAIDWENKTQGVWFQDFGLKTLSDDAE-ADAVG---------------SAVTVERGPAEL--------DFEADLVAYLSALGARVAAFCKRHVARFDFSGANVALIPSVPGVHKGSDMEKFGHLRVRKLLQLLKVPPSDNP--LICQFSSMGSLDEKWLFGEFAQSLLKGKKGITGTSAPVQA----LHLIWPSVEDVRNSTEGWNAG 592
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.710e-42 Identity = 127/356 (35.67%), Postives = 166/356 (46.63%), Query Frame = 1 Query: 523 PLFRL-NRLLGDHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCDGMPSNVAC--------HHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGY-----------HTGRNLHKYGHMRVRALLENEAFPNSGDR--DG---ISAQFSSLATV---PEGFLDELTNSFMA------QRGPSKPKVS--------CRDHLQLVWPTVEGVRTSLRGWSSGG 1464 PL+RL + D V L+D+LSG F S LLCN+ V Y L+ PRL V V +VH G D + C +P+ +YG +H KM ++K+ TGIRVAV TANF D QGVWYQDFP +R + S F++ L + +GG FA TL Y+F A ALVPSVPG H GR+LHKYGHMRVRALL E +G + +G + Q SSLA++ P +L E+ SFM + P++ VS HL++VWP+VE VRTS +GW +GG Sbjct: 81 PLYRLLSTSPSDRASTGSVGLDDLLSGDFESALLCNYMVDYALLVRCAPRLG--SVPVTIVHGFKPGTQDEVNLRSQCAVNPGVKLRYPELPEYGTNHAKMIILKFPTGIRVAVLTANFIVVDVTDKSQGVWYQDFP--------------------------KRTSGSCA-----------------FQEDLMGFLFKVGGPA-SAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSEDEAQATLLEQHLRVVWPSVEAVRTSSQGWIAGG 390
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A1V9ZNZ3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNZ3_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.570e-42 Identity = 104/303 (34.32%), Postives = 145/303 (47.85%), Query Frame = 1 Query: 571 CVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCD---GMPSNVACHHPKT-LQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPG-YHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFLDELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSGG 1464 C+ ND+L+G F +L N+++ +WLL+ RL E+V V+L H G Q G +N+ P + YG HHTKM V+ Y+ +RVA+FTANF DW QG+WYQDFP KE N FE L Y +L KV A L+LY+F+ A L+PSVPG Y T ++HKYGH+R++ +LE ++ + AQFSS ++ E +L E +SF P +VWP+V VR S+ GW +GG Sbjct: 622 CISFNDILAGEFTHAILTNYKIDAEWLLKQSTRL--EQVPVLLCHGGDQQRMKNAIGKRTNITVIAPPLPIPYGTHHTKMTVLFYSQFVRVAIFTANFLAGDWNDKTQGIWYQDFPLKEES--------------------------------------TTSTATNTFEQDLAGYLSSLHPKVADWCATKLALYDFNQAQVILIPSVPGTYSTPTDMHKYGHLRLKKVLEQNNVSKKPNQP-VVAQFSSFGSLNESWLMEFLSSFRLCTVSILPPPK---EFHIVWPSVAAVRGSIEGWRAGG 880
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA) HSP 1 Score: 171 bits (432), Expect = 5.540e-42 Identity = 112/304 (36.84%), Postives = 153/304 (50.33%), Query Frame = 1 Query: 580 LNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHD--GSQGM---CDGMPSNVACHHPKTLQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFL-DELTNSFMAQRGPSKPKVSCRDH----LQLVWPTVEGVRTSLRGWSSG 1461 LND+L G F LL N+ WL PRLR +V V+LVH QGM C + + P + YG HHTKM V Y +RVA+FTANF +DW QG+WYQDF K + + E E ++A + ++FE L Y +LG V ++F L ++FS A ALVP+VPG H G+++ KYGH+RVR LL+ P + + + QFSSL ++ E +L E SF+ P K +S L ++WP+VE V+ SL GWSSG Sbjct: 173 LNDLLEGDFTRCLLTNYMFDLPWLFAECPRLR--DVPVLLVHGERDRQGMTKECREYANVTSVAPPLPIPYGTHHTKMLVALYPEKVRVAIFTANFLSNDWNTKTQGIWYQDFGLKVL----------------ADSEDEEKEAVAGA---------------SEFEADLAHYLSSLGAPV-KVFCGELKRFDFSTARVALVPAVPGVHKGKDMEKYGHLRVRKLLKMYKVPPTDNP--LICQFSSLGSLDEKWLFGEFAESFL----PGKRNISSTSMPTQALHIIWPSVEDVQNSLEGWSSG 436
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Match: A0A7C9AQX7_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AQX7_OPUST) HSP 1 Score: 165 bits (417), Expect = 8.200e-42 Identity = 108/318 (33.96%), Postives = 161/318 (50.63%), Query Frame = 1 Query: 529 FRLNRLLG--DHQEGTCVKLNDVLSGPFYSVLLCNFQVMYDWLLESVPRLRLEEVQVVLVHDGSQGMCDGM----PSNVACHHPKT-LQYGCHHTKMAVVKYATGIRVAVFTANFRESDWEGMVQGVWYQDFPAKEVDGGAKHSDQDGNEGRRRNLEGERRDASSIMXXXXXXXXXXXKGKLNDFEDTLKDYFDALGGKVVRLFARTLSLYNFSAATAALVPSVPGYHTGRNLHKYGHMRVRALLENEAFPNSGDRDGISAQFSSLATVPEGFLDELTNSFMAQRGPSKPKVSCRDHLQLVWPTVEGVRTSLRGWSSG 1461 FRL R+ G + +CV + DV+ G +L N+ V +WLL + P L+ QV++VH S G + M PSN H P + YG HH+K ++ Y G+RV V TAN DW QG+W QDFP K G K SD + RD + KL +F L+ ALG +++ A +++ A L+ SVPGYH+G +L ++GHM++R++LE AF R + QFSSL ++ E +++EL +S + K + + L ++WPTVE VR SL G+++G Sbjct: 22 FRLMRVQGLPEWANTSCVSIEDVIKGDVLLAILSNYMVDMEWLLCACPTLK-RVPQVLVVHGESDGTLEYMKKTKPSNWILHKPPLPISYGTHHSKAMLLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKGQHGACKGSDFE-------------RDLVDYLQAL----------KLPEFTADLQ----ALGR--LKIDASFFKKFDYGNAAVRLIASVPGYHSGAHLKRWGHMKLRSVLEGHAFDEEFRRSPLVYQFSSLGSLDEKWMNELRSSMSSGLSVDKTPLGLGEPL-IIWPTVEDVRCSLEGYAAG 308 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7523.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7523.1.4 >prot_C-tenellus_contig7523.1.4 ID=prot_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=417bp MNVIEILSEGEQDSEEEENFQAAIRNSLATRQDQTDSISQGVLDPNTMPIback to top mRNA from alignment at C-tenellus_contig7523:442..4246- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7523.1.4 ID=mRNA_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3805bp|location=Sequence derived from alignment at C-tenellus_contig7523:442..4246- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7523:442..4246- >mRNA_C-tenellus_contig7523.1.4 ID=mRNA_C-tenellus_contig7523.1.4|Name=mRNA_C-tenellus_contig7523.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1251bp|location=Sequence derived from alignment at C-tenellus_contig7523:442..4246- (Choristocarpus tenellus KU2346)back to top |