mRNA_C-tenellus_contig750.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.260e-66 Identity = 118/182 (64.84%), Postives = 137/182 (75.27%), Query Frame = 1 Query: 4 TWRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGMGEQG-----EVVASLMQRYQDLKEEYKMYRKKAMHAIQASGGGDGDNGSGRDIPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAWMANFTGMFGGGA 534 +WR AY+KQ++ETE LK GG+ LAAQWRQRYEKLS+EK DAVAKLDML+ GG E VASLM++YQDLKEEY++YRKKAMHAIQ +G G ++ +PKL+YLKNLM+KYL TDEGE RE MERAIATVLQFSE ERQ L+E RQAQT AWM+NFTGMF G A Sbjct: 236 SWRQAYQKQVKETEVLKREGGDTALAAQWRQRYEKLSLEKEDAVAKLDMLKGDGGXXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAGXXXXXXXXGLELQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQERQDLKEARQAQTVAWMSNFTGMFAGSA 417
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.360e-34 Identity = 83/189 (43.92%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLR-PGGGSGTGGMGEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQAS--------------GGGDGDNGSGRDIPNP------KLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAWMANF 510 WR +K +E EKL+ G EA LAAQWRQRYE+ S EKA+ VAKL ++ P T G +SL+++Y+DL+EEYK+YRK+AM AIQ GG +P+P + +YLKNLM+KYL TDE E RE MERA+ TVLQFS++E+ ++E+R + AW+ N+ Sbjct: 264 WRKQCDKLSRENEKLRSEGSEAALAAQWRQRYEQCSREKAELVAKLSIVSTPAEARSTTG------DFSSLVKQYEDLREEYKLYRKRAMEAIQEKELLLAQSGAAALRFAGGRPSRRGASPVPHPPPLEDPRFQYLKNLMIKYLCTDEFEAREHMERAVMTVLQFSDAEQSFVQERRAESSVAWLTNW 446
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A835YNU9_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU9_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.560e-27 Identity = 79/200 (39.50%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 31 IQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRP------GGGSGTGG---MGEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQASGGGDGDNGSGRD----------------------IPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQ----AQTAAWMANFTGMFG 525 ++E E+L+ AG EA +AAQWRQRYE S EK DA+AKL+ML GGGSG+ M A+L +Y LKEEY++YR+KAM A+Q + KL YL+NL++KYL TD+ R MERA+ VLQFS +ER LR +R+ A T AW++ T + G Sbjct: 256 VREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTALLG 455
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A7S0GEZ1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEZ1_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.920e-25 Identity = 70/169 (41.42%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGMGEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQASGGGDGD-----NGSGRDIPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAW 498 W+ AYE +QE LK +G EA+LA+QWR RYE EK D ++DML+ M G M +Y+DLKE +++YRKKA +A G+ + N S R + K+ YL+NLMV YL +DE VRE ME AI T+L+FS +E A EK + +W Sbjct: 2 WKVAYESLLQENNTLKNSGAEALLASQWRARYELCKKEKEDMANQVDMLKKQLAESKQNMNGNGSSEKYEM-KYRDLKESFRLYRKKAKEIFEAQLKGENNPARVVNLSERGTEDAKIAYLRNLMVNYLSSDET-VREHMESAIGTILKFS-AEDVAKVEKAKEDNPSW 167
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A7S4IPA4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IPA4_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.010e-22 Identity = 68/165 (41.21%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGMGEQGEVVASLMQ---------RYQDLKEEYKMYRKKAMHAIQAS--GGGDGDNG----SGRDIPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESER 456 W+ AY+ + E LK +G EA+LAAQWR RYE EK DA A+L + + E+ V++ + +Y+DLKE +++YRKKA +A GGG D G S R + KL YL+NLMV YL +D VRE ME AI TVL+FS+ +R Sbjct: 307 WKEAYDLLLAENNSLKSSGAEALLAAQWRHRYEMCMSEKEDADARLQVEK-----------EKCNVLSDARKAADAGKYEAKYRDLKESFRLYRKKAKEIFEAQQRGGGGVDAGLLHMSDRGTDDAKLSYLRNLMVNYLSSDSA-VREHMETAIGTVLKFSDEDR 459
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: B5YLS1_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLS1_THAPS) HSP 1 Score: 97.8 bits (242), Expect = 2.240e-20 Identity = 70/183 (38.25%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGMGEQGEVVASLMQ------------RYQDLKEEYKMYRKKAMHAIQASGGGDG-------DNGSGRDIPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAW 498 W+ +Y+ + E EKLK +G EA+LAAQWR RYE EK DAV L+M R E + L +Y+DLKE +++YRKKA A G+ D G+ K+ YLKNLMV YL +D VRE ME AIATVL F+E + + ++ K + Q+ +W Sbjct: 322 WKESYDLLMAENEKLKSSGAEALLAAQWRHRYEACMKEKEDAVTNLEMER--------------EKIMDLQDQRRKLDAGKYENKYRDLKESFRLYRKKAKEIFLAQQQGETGFLPSLHDTGA----EGAKISYLKNLMVNYLGSDVS-VREHMEPAIATVLNFTEDDLEKVK-KAKGQSDSW 484
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: K0S4B1_THAOC (GRIP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4B1_THAOC) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-17 Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPG--GGSGTGGMGEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQASGGGDGD-----NGSGRDIPNPKLEYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQ 480 W+ +Y+ + E EKLK +G EA+LAAQWR RYE EK A+ L+M + T + G+ A +Y+DLKE +++YRKKA A G+ + SG + + K+ YLKNLMV YL +D VR ME AI TVL F++ + +R++++ Sbjct: 363 WKESYDLLLAENEKLKSSGAEALLAAQWRHRYESCLKEKEAALTNLEMEKEKVVEMQDTRSKADAGKYEA----KYRDLKESFRLYRKKAKEIFLAQQQGETGFMPTLHDSGAE--SAKISYLKNLMVNYLASDAA-VRGHMEPAIGTVLNFTDDDLDKIRKQKE 520
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A1V9YAK9_9STRA (GRIP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAK9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.760e-17 Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGMGEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQA-----------------SGGGDGDNGSGRDIPNPKL-------------EYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAW 498 W Y K +E +KL G GE VLA +WR+RYE ++ EK + AKL S +G +A L K E+ +YRK+AM ++ SG G G R + L EYLKN++VKY+ TD EV+E ME+AIATVLQFS +E + + +KR A ++W Sbjct: 269 WSDKYAKLQREFDKLSGTMGETVLAMEWRERYEAVAREKMELEAKL---ASSDASFQLAQDLEGNDIAKL-------KTEFALYRKRAMAVVEQKEKELQAARSQQGEAPRSGSGFSSAGLRRMSSSNSLSGFETSPHAPTTNEYLKNIVVKYMSTDHAEVKEHMEKAIATVLQFSPAELKLIEDKRHAGASSW 452
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A485L5T3_9STRA (Aste57867_15789 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5T3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.750e-16 Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKL--DMLRPGGGSGTGGMGEQGEVVASL-----------MQRYQDLKEEYKMYRKKAMHAIQASGGGDGDNGSGRDIPNPKL-------------EYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAWM 501 W ++K +E KL GA GE VLA +WR+RYE++ EKA A+L D G G GG + G +A L MQ + + E ++ R + A G G G R + L EYLKN+++KY+ TD+ EV+E ME+AIATVL F+ E Q +++KR++ + W+ Sbjct: 276 WHDKFDKLQREYSKLSGAMGETVLAMEWRERYEQVVAEKAAMEARLAEDARGNGHGFNLGGDLDGGNDIAKLKMEFALYRKRAMQVVEQKERELQLARTSSHAPPNAPGPGFSSAGLRRMSSSNSLNGFETSTHAPTTNEYLKNIVMKYMSTDQEEVKEHMEKAIATVLNFTSVELQHIQDKRKSHSG-WL 465
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Match: A0A2D4C3D3_PYTIN (GRIP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3D3_PYTIN) HSP 1 Score: 83.6 bits (205), Expect = 2.100e-15 Identity = 69/199 (34.67%), Postives = 95/199 (47.74%), Query Frame = 1 Query: 7 WRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMLRPGGGSGTGGM-----------------------GEQGEVVASLMQRYQDLKEEYKMYRKKAMHAIQASGGGD--------GDNGS--GRDIPNPKL--EYLKNLMVKYLETDEGEVREQMERAIATVLQFSESERQALREKRQAQTAAW 498 WR +EK ++ EKL G GE VLA +WR+RYE+ +K KL+ LR + T G G G +S Y+DL +++GGG N S G ++PN EYLKN++ KY+ T++ E RE ME+AIATVL FS SE A++E+R+AQ A W Sbjct: 254 WRRKFEKLYKDYEKLSGTMGETVLATEWRERYEQAVRDKEATDKKLEELRSTLATITNGSDGSARSDYAPFRRRDPFHGFENGGGSGSADSSRSSSYKDLG------------PPRSTGGGPPVRPLRRMSSNNSLGGLEVPNVTTTNEYLKNIVYKYMTTEQDEAREHMEKAIATVLNFSPSEVNAVQERRKAQ-AGW 439 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig750.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig750.1.1 >prot_C-tenellus_contig750.1.1 ID=prot_C-tenellus_contig750.1.1|Name=mRNA_C-tenellus_contig750.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=193bp KTWRHAYEKQIQETEKLKGAGGEAVLAAQWRQRYEKLSVEKADAVAKLDMback to top mRNA from alignment at C-tenellus_contig750:368..2397+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig750.1.1 ID=mRNA_C-tenellus_contig750.1.1|Name=mRNA_C-tenellus_contig750.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2030bp|location=Sequence derived from alignment at C-tenellus_contig750:368..2397+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig750:368..2397+ >mRNA_C-tenellus_contig750.1.1 ID=mRNA_C-tenellus_contig750.1.1|Name=mRNA_C-tenellus_contig750.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=579bp|location=Sequence derived from alignment at C-tenellus_contig750:368..2397+ (Choristocarpus tenellus KU2346)back to top |